BAC Information

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BAC

Clone NameB6Ng01-209M07
Chromosome17 (Build37)
Map Location 33,703,532 - 33,704,665
singlet/doubletsinglet
Overlap geneMyo1f
Upstream geneLOC667178, LOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10
Downstream geneZfp414, Pram1, Hnrpm, March2, Rab11b, Angptl4, Ankrd47, Rps28, Ndufa7, Cd320, LOC100042967, LOC630219, LOC100042970, BC051226, Daxx, Zbtb22, Tapbp, Rgl2, H2-Ke2, Wdr46, B3galt4, Rps18, Vps52, EG630499, LOC100042989, AA388235, H2-K1, LOC654352, Ring1, H2-Ke6, Slc39a7, Rxrb, Col11a2, LOC672505, H2-Pa, H2-Oa, Brd2, LOC100043003, LOC100043522, H2-DMa, H2-DMb2, H2-DMb1, Psmb9, Tap1, Psmb8, Tap2, H2-Ob, H2-Ab1, H2-Aa, H2-Eb1, H2-Eb2, H2-Ea, Btnl2, LOC100038862, LOC667442, BC051142, EG632126, Btnl5, LOC624681, Btnl7, Notch4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209M07.bB6Ng01-209M07.g
ACCGA028302GA028303
length1,1251,190
definitionB6Ng01-209M07.b B6Ng01-209M07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcacctgtgtattttattgatactcaagtttgagctggctgca
gggatacctacatgcctgtaattccatatctctggagcctgcttggaagt
cagagcacctggctgtagtcttgcgttgtaaactctccatcctcagaaag
ggatggctgagactcctacttgtgccacaggaccctgatttactctcttc
agagtccctgccatgttgtccctctctgatgccgctgcctgaactctcct
tagagcttgggctatatatacattttttcagtctgtctgtccatggtgtt
aacttttaacaaaagccctactcccaataatccttctcagggttcctctt
gagctttcatctgagccctttcacaggtgggcacatatggtggctccatt
acattttgagaccactagtgtgaccactttcagatttgcagatacatatt
ttagcacctgtaactttccccgctgcattgcaggggactacatgaattta
ttttactttcttccatagtgttctttttcctttctttcattcttgttgaa
acaggggctagaacccagggcctcacacctgaatgctaagcaggcattct
actcctgagccaaccccagcctctcacttgaagtttctaggtgtggcttc
actcctgcaccccacttccagcttccttctggggaattctaggcagaggc
tccacccctgagatgcaccccagcatcttactgggagattttaggcagga
gttctacccctgagccatgccctagtctgtcactgggggattctagttag
ggactctactcctgagccattccccagtccctccctcactgggcaagtct
aggtgggggttatcacccttcactaaaggactataaggggttcattgcgc
catggcccaccctgctgggttctatacttgcctttacatgcacaggaccc
tggctcttacctaaaaagagtactgtgtatgatgcacaagatctctctct
ctctccatgaagagacagcaaagggagagttcatggatgcacatatgcag
ctatttagggtgacggggtgacatatacctgtaatctctagaaaagaagc
tgctgggaagtcagaagtattctag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaacagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatacccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaattcctagccaa
atggatggacctgaaaggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaacttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatacccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatcctccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgccccacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtacccaagagctaagggatctgcaacccta
taggtggatcaacatttatgactaaccagtaccctcggagctctgactct
agctgcatattgttatcaagatgggcttagtccgcatccactggtaagag
agtccaatgaacacaccaaaacttttattgccagaccggtgaactgctat
gcataaatgggggattgggccgtgatatgagtatagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_33703532_33704665
seq2: B6Ng01-209M07.b_49_1173 (reverse)

seq1  CTAG-ATACTTCTGACCTCCCAGGCAGC-TCTTTCTTAGCATCTCCAGGT  48
      |||| ||||||||||| ||||| ||||| |||||  |||    | |||||
seq2  CTAGAATACTTCTGACTTCCCA-GCAGCTTCTTTTCTAGAGATTACAGGT  49

seq1  ATATGTCACCCCGTCACCCTTAATAGCTGCATACTGTTGCATTCCATGAA  98
      |||||||||||||||||||| |||||||||||| || |||| ||||||||
seq2  ATATGTCACCCCGTCACCCTAAATAGCTGCATA-TG-TGCA-TCCATGAA  96

seq1  CTTCTCCCTTTGCTGTCTCCTTCATGGAGAGAGAGAGAGATCTTGTTGCA  148
      | |||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  C-TCTCCCTTTGCTGTCT-CTTCATGGAGAGAGAGAGAGATCTTG-TGCA  143

seq1  TCATACACAGTACTCTTTTTTTAGGTAAGAGCCCAGGGTCCTGTGCATGT  198
      |||||||||||||||  |||||||||||||| ||||||||||||||||||
seq2  TCATACACAGTACTC--TTTTTAGGTAAGAG-CCAGGGTCCTGTGCATGT  190

seq1  AAAGGCAAGTATAGAACCCAGCAGGGTGGGCCATGGCGCAATGAACCCCC  248
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAGGCAAGTATAGAACCCAGCAGGGTGGGCCATGGCGCAATGAA-CCCC  239

seq1  TTATAGTCCTTTAGTGAAGGGTGATAACCCCCACCTAGACTTGCCCAGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCCTTTAGTGAAGGGTGATAACCCCCACCTAGACTTGCCCAGTG  289

seq1  AGGGAGGGACTGGGGAATGGCTCAGGAGTAGAGTCCCTAACTAGAATCCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGACTGGGGAATGGCTCAGGAGTAGAGTCCCTAACTAGAATCCC  339

seq1  CCAGTGACAGACTAGGGCATGGCTCAGGGGTAGAACTCCTGCCTAAAATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGACAGACTAGGGCATGGCTCAGGGGTAGAACTCCTGCCTAAAATC  389

seq1  TCCCAGTAAGATGCTGGGGTGCATCTCAGGGGTGGAGCCTCTGCCTAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTAAGATGCTGGGGTGCATCTCAGGGGTGGAGCCTCTGCCTAGAA  439

seq1  TTCCCCAGAAGGAAGCTGGAAGTGGGGTGCAGGAGTGAAGCCACACCTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGAAGGAAGCTGGAAGTGGGGTGCAGGAGTGAAGCCACACCTAG  489

seq1  AAACTTCAAGTGAGAGGCTGGGGTTGGCTCAGGAGTAGAATGCCTGCTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCAAGTGAGAGGCTGGGGTTGGCTCAGGAGTAGAATGCCTGCTTA  539

seq1  GCATTCAGGTGTGAGGCCCTGGGTTCTAGCCCCTGTTTCAACAAGAATGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAGGTGTGAGGCCCTGGGTTCTAGCCCCTGTTTCAACAAGAATGA  589

seq1  AAGAAAGGAAAAAGAACACTATGGAAGAAAGTAAAATAAATTCATGTAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGAAAAAGAACACTATGGAAGAAAGTAAAATAAATTCATGTAGT  639

seq1  CCCCTGCAATGCAGCGGGGAAAGTTACAGGTGCTAAAATATGTATCTGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCAATGCAGCGGGGAAAGTTACAGGTGCTAAAATATGTATCTGCA  689

seq1  AATCTGAAAGTGGTCACACTAGTGGTCTCAAAATGTAATGGAGCCACCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAAGTGGTCACACTAGTGGTCTCAAAATGTAATGGAGCCACCAT  739

seq1  ATGTGCCCACCTGTGAAAGGGCTCAGATGAAAGCTCAAGAGGAACCCTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCCACCTGTGAAAGGGCTCAGATGAAAGCTCAAGAGGAACCCTGA  789

seq1  GAAGGATTATTGGGAGTAGGGCTTTTGTTAAAAGTTAACACCATGGACAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATTATTGGGAGTAGGGCTTTTGTTAAAAGTTAACACCATGGACAG  839

seq1  ACAGACTGAAAAAATGTATATATAGCCCAAGCTCTAAGGAGAGTTCAGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTGAAAAAATGTATATATAGCCCAAGCTCTAAGGAGAGTTCAGGC  889

seq1  AGCGGCATCAGAGAGGGACAACATGGCAGGGACTCTGAAGAGAGTAAATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCATCAGAGAGGGACAACATGGCAGGGACTCTGAAGAGAGTAAATC  939

seq1  AGGGTCCTGTGGCACAAGTAGGAGTCTCAGCCATCCCTTTCTGAGGATGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCTGTGGCACAAGTAGGAGTCTCAGCCATCCCTTTCTGAGGATGG  989

seq1  AGAGTTTACAACGCAAGACTACAGCCAGGTGCTCTGACTTCCAAGCAGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTACAACGCAAGACTACAGCCAGGTGCTCTGACTTCCAAGCAGGC  1039

seq1  TCCAGAGATATGGAATTACAGGCATGTAGGTATCCCTGCAGCCAGCTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGATATGGAATTACAGGCATGTAGGTATCCCTGCAGCCAGCTCAA  1089

seq1  ACTTGAGTATCAATAAAATACACAGGTGAAGAATTC  1134
      ||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTATCAATAAAATACACAGGTGAAGAATTC  1125