BAC Information

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BAC

Clone NameB6Ng01-211F24
Chromosome17 (Build37)
Map Location 29,065,031 - 29,065,992
singlet/doubletsinglet
Overlap genenone
Upstream geneAnks1, Tcp11, 4930526A20Rik, Scube3, LOC100042764, Zfp523, Def6, Ppard, 1810013A23Rik, Fance, Rpl10a, Tead3, Tulp1, Fkbp5, 4930511I11Rik, Gm749, Clps, Tmhs, Srpk1, Slc26a8, Mapk14, LOC100043318, Mapk13, Brpf3, Pnpla1, 4930539E08Rik
Downstream genePxt1, Kctd20, Stk38, Sfrs3, LOC100042815, Cdkn1a, 9830134C10Rik, LOC100043341, Cpne5, Ppil1, BC004004, LOC100043348, Pi16, Mtch1, Fgd2, Pim1, 4933413N12Rik, Tbc1d22b, Rnf8, 1300018I05Rik, Mdga1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211F24.bB6Ng01-211F24.g
ACCGA029459GA029460
length116968
definitionB6Ng01-211F24.b B6Ng01-211F24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atttggtcaaacttcagtttttcactttcctccttgcgtcttccatctct
ctggcttatctgtagtctttctgttgcctggtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgt
gaattctaggccctatcttaaaaaaagaaaaaaaatgtaataggggtgaa
gatgtctctagggtgaaaggtgcttgccaccaagcctgaagccgcgggtt
caatcccaggaggggtgagagaggactcacaaaaatcttcttctgccctc
tagacactgtggcacgagccatcaagggaaacaggattacctggcaaatg
gatgctgacaaactgctaagcttgtagattcagtgttacccaacagatcc
tgacatgggagagacacaaaggtgtttgttcatctgtttcagacatatgc
ccttggcaggcagcaggttcaaggctaacctgggctacgtgagattccat
ctcaaaaaagagaaagggggcaggggagctggctccgtggtgaaagtgtg
agctgctctagaggaccagagcccacactgggcggctcgcgagggccctg
tgattctagctgcagggtatgcaccatctcagcctccaaagacgcctgca
agaacacacatgtgcttacacacacagaaaattataatggtttaaaaaaa
aatcagtctttaacaacagaaaggacaataggaaagtatattccagggat
ggaaggtagaatgcagaagaatttttcagagagagagagaaaaaaaaaaa
actgtcactgtcacagggctggtgtggggtgaaccccggcgggtagtggt
ggagtttaactctggggaacccatgtttcctgctgtaacaagttagggga
gcagacacctgccacaccgccattggctgtgtcctctgtgcgctgggctc
ctgccaggcatttacaagcattggctagactgtttatcttggaaagcatc
ttgatgccgggacaatgcttcttaaatgaacggtggtcacagcagctcgt
gacaaccccttgtgacctcggatagggtgattgttgtcattgtccctcaa
ggggtgaccaagacatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_29065031_29065992
seq2: B6Ng01-211F24.g_64_1031 (reverse)

seq1  CCATGTCTTGGTCA-CCCATGA-GGACAATGACAACAATCA-CCTAT-CG  46
      |||||||||||||| ||| ||| |||||||||||||||||| ||||| ||
seq2  CCATGTCTTGGTCACCCCTTGAGGGACAATGACAACAATCACCCTATCCG  50

seq1  AGGTCACATGGGGTTGTCACGAGCTGCTGTGA-CACCGTTCATTTAAAGA  95
      |||||||| ||||||||||||||||||||||| ||||||||||||||  |
seq2  AGGTCACAAGGGGTTGTCACGAGCTGCTGTGACCACCGTTCATTTAAGAA  100

seq1  GCATTGT-CCGGCATCAAGATGCTTTCCAAGATAAACAGTCTAGCCAATG  144
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTCCCGGCATCAAGATGCTTTCCAAGATAAACAGTCTAGCCAATG  150

seq1  CTTGTAAATGCCTGGCAGGAGCCCAGCGCACAGAGGACACAGCCAATGGC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAATGCCTGGCAGGAGCCCAGCGCACAGAGGACACAGCCAATGGC  200

seq1  GGTGTGGCAGGTGTCTGCTCCCCTAACTTGTTACAGCAGGAAACATGGGT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGCAGGTGTCTGCTCCCCTAACTTGTTACAGCAGGAAACATGGGT  250

seq1  TCCCCAGAGTTAAACTCCACCACTACCCGCCGGGGTTCACCCCACACCAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGAGTTAAACTCCACCACTACCCGCCGGGGTTCACCCCACACCAG  300

seq1  CCCTGTGACAGTGACAGTTTTTTTTTTTTCTCTCTCTCTCTGAAAAATTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGACAGTGACAGTTTTTTTTTTTTCTCTCTCTCTCTGAAAAATTC  350

seq1  TTCTGCATTCTACCTTCCATCCCTGGAATATACTTTCCTATTGTCCTTTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTCTACCTTCCATCCCTGGAATATACTTTCCTATTGTCCTTTC  400

seq1  TGTTGTTAAAGACTGATTTTTTTTTAAACCATTATAATTTTCTGTGTGTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTAAAGACTGATTTTTTTTTAAACCATTATAATTTTCTGTGTGTG  450

seq1  TAAGCACATGTGTGTTCTTGCAGGCGTCTTTGGAGGCTGAGATGGTGCAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACATGTGTGTTCTTGCAGGCGTCTTTGGAGGCTGAGATGGTGCAT  500

seq1  ACCCTGCAGCTAGAATCACAGGGCCCTCGCGAGCCGCCCAGTGTGGGCTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCAGCTAGAATCACAGGGCCCTCGCGAGCCGCCCAGTGTGGGCTC  550

seq1  TGGTCCTCTAGAGCAGCTCACACTTTCACCACGGAGCCAGCTCCCCTGCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTCTAGAGCAGCTCACACTTTCACCACGGAGCCAGCTCCCCTGCC  600

seq1  CCCTTTCTCTTTTTTGAGATGGAATCTCACGTAGCCCAGGTTAGCCTTGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTCTTTTTTGAGATGGAATCTCACGTAGCCCAGGTTAGCCTTGA  650

seq1  ACCTGCTGCCTGCCAAGGGCATATGTCTGAAACAGATGAACAAACACCTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTGCCTGCCAAGGGCATATGTCTGAAACAGATGAACAAACACCTT  700

seq1  TGTGTCTCTCCCATGTCAGGATCTGTTGGGTAACACTGAATCTACAAGCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCTCCCATGTCAGGATCTGTTGGGTAACACTGAATCTACAAGCT  750

seq1  TAGCAGTTTGTCAGCATCCATTTGCCAGGTAATCCTGTTTCCCTTGATGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTTGTCAGCATCCATTTGCCAGGTAATCCTGTTTCCCTTGATGG  800

seq1  CTCGTGCCACAGTGTCTAGAGGGCAGAAGAAGATTTTTGTGAGTCCTCTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCCACAGTGTCTAGAGGGCAGAAGAAGATTTTTGTGAGTCCTCTC  850

seq1  TCACCCCTCCTGGGATTGAACCCGCGGCTTCAGGCTTGGTGGCAAGCACC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCTCCTGGGATTGAACCCGCGGCTTCAGGCTTGGTGGCAAGCACC  900

seq1  TTTCACCCTAGAGACATCTTCACCCCTATTACATTTTTTTTCTTTTTTTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCCTAGAGACATCTTCACCCCTATTACATTTTTTTTCTTTTTTTA  950

seq1  AGATAGGGCCTAGAATTC  962
      ||||||||||||||||||
seq2  AGATAGGGCCTAGAATTC  968