BAC Information

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BAC

Clone NameB6Ng01-214H20
Chromosome17 (Build37)
Map Location 14,770,328 - 14,771,383
singlet/doubletsinglet
Overlap genenone
Upstream geneTcte2, Mllt4, LOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik, Dact2, Smoc2, LOC664856
Downstream geneThbs2, LOC100041236, Wdr27, LOC664893, 1600012H06Rik, Phf10, LOC100041586, LOC100041574, LOC100041289, LOC100041639, LOC100041621, LOC100041301, 9030025P20Rik, Tcte3, C330048F19, LOC664953, Dll1, LOC100041314, 4932442K08Rik, Psmb1, Tbp, Pdcd2, LOC636398, Prdm9, EG626573, LOC665017, LOC100041775
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214H20.bB6Ng01-214H20.g
ACCGA031723GA031724
length1,0531,229
definitionB6Ng01-214H20.b B6Ng01-214H20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaattcattgtttttaatagctgagtagtactccattgtgt
aaatgtaccacatattctatatccattcttctgttgaggggcatctgggt
tctttccagcttctggctattataaataaggctgctatgaacatagtgga
gcatgtgttctcattatcaattggaacttctgggtatatacccaagagag
gcatatacaatttgccatcttaatgcaggtcagcacatgtgaaatgcaca
gtgtcattggtgtagtgaaactgctgcctttcctttagggagctcttccc
tccttgaaaatgccctctcccatggctcccccttcaagcctggctctagg
aaaactcacagtgctttctaccgaaagtatcctcttgtatctctattgga
gatgaagtctcatctgtgttctttctaacattgtaatagtttcaaatcat
ttttataacagtgtggtccaatagtttcagtgttatttatcttcattgca
ttgcatggtaaatgatgccactcctactagcatggtatgaccaataggcc
atcagtattctggccacccatggccagggtgcctgtacagctgacaactg
gctcaataccagactttcctataatctgaatattgaggatgtggttacat
aaataagcatacggaaacattttcatgtatctcgtgattaaacagcatct
aaaaatgtgacgtataatcaataaatattcacagaatagctcaatcaaca
aatacaatagttaccgatagtcaaaagtaatttagtcatttttagattta
acaggaaaatcctttaataataaaatttttaaaatttatttgagtaactc
attggctgactctatagtcctacttgttctgaaaatgtcttttcactcaa
caacactctccgtcatacatatagattttaattggcagcctctacccaca
aaagttcagtgtgaggggaagcacctagcctggcagagacttgagtgcca
gggtttgggggacacccagggcccccactgctcagaggagaggagagaga
aat
gaattccaggcctgctatgatgaaggttttggctcagttcattccaatgt
tgtccctacttgggagacacctctcatgggccccttggaggagactgggg
tgtttcagagccagttttgttctttctgtgcagatttcctatggctgatg
tgcctcaacctgtacttttgccccagccttggtgtgaatctctggatgac
ttgactgtgtaaagatacaaccctccggcttggttttctctatcctctcc
atctttctgtgggacttcactgtgggactctcctgggctgtagaatgtct
tttaaccctatttattttctcaatctgtccaaaagctttttggtttgctg
taactccgtttcaacttttgcttcttgccagtccttttggggtcacagtc
aaaacctcagcggctcagatcatttatctggagcattttcccccttggtt
tcctctaggagctttaggaatttgatctgcactctccgatcgttttgtgt
tgacttttacatgatctgagagtaaggggcggaattcatcgttttacata
tgctagtagtgtactgtccctccagcaccagccatcggatcaattttgtt
gatcaatattgacattaaactttacatttcctcaagatccaaaattcata
ggctggaaaaacacaagaatctattcatgtcttctgatcatccatttttc
tgctataatagactttaataatctatatttctgtgttatcaatgataatg
tatcctgttttaggtatataaattgatgtaattgcttctttcttttttct
ttgtttatctaaatgtttagtgattttgtgtttacaaatttctgatttat
tgattttttatattatccctttagtctcaattttacttaattctgctctg
atatttattatttattaatttttaggtttcaattattcttttatttagtt
gtttgggttgtacttatgtcttaactagggtttaactgatgtgaacagac
accatggccaagcaactcttataaggacagcatttaactggagcttggat
tcaaggtcagaggtttcagttcattatcattcaagcatgagcttgccaca
ttcttaggccaggcatggggccaggaggagacctggaaagttctacactc
tccattgaggcggtatgaagaaacatgcctctccagtggtttgaagacag
aaggtctccaattgctcatcactctccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_14770328_14771383
seq2: B6Ng01-214H20.b_46_1098

seq1  GAATTCCATAAATTCATTGTTTTTAATAGCTGAGTAGTACTCCATTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAATTCATTGTTTTTAATAGCTGAGTAGTACTCCATTGTGT  50

seq1  AAATGTACCACATATTCTATATCCATTCTTCTGTTGAGGGGCATCTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACCACATATTCTATATCCATTCTTCTGTTGAGGGGCATCTGGGT  100

seq1  TCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGA  150

seq1  GCATGTGTTCTCATTATCAATTGGAACTTCTGGGTATATACCCAAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTTCTCATTATCAATTGGAACTTCTGGGTATATACCCAAGAGAG  200

seq1  GCATATACAATTTGCCATCTTAATGCAGGTCAGCACATGTGAAATGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATACAATTTGCCATCTTAATGCAGGTCAGCACATGTGAAATGCACA  250

seq1  GTGTCATTGGTGTAGTGAAACTGCTGCCTTTCCTTTAGGGAGCTCTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATTGGTGTAGTGAAACTGCTGCCTTTCCTTTAGGGAGCTCTTCCC  300

seq1  TCCTTGAAAATGCCCTCTCCCATGGCTCCCCCTTCAAGCCTGGCTCTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAAAATGCCCTCTCCCATGGCTCCCCCTTCAAGCCTGGCTCTAGG  350

seq1  AAAACTCACAGTGCTTTCTACCGAAAGTATCCTCTTGTATCTCTATTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCACAGTGCTTTCTACCGAAAGTATCCTCTTGTATCTCTATTGGA  400

seq1  GATGAAGTCTCATCTGTGTTCTTTCTAACATTGTAATAGTTTCAAATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGTCTCATCTGTGTTCTTTCTAACATTGTAATAGTTTCAAATCAT  450

seq1  TTTTATAACAGTGTGGTCCAATAGTTTCAGTGTTATTTATCTTCATTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAACAGTGTGGTCCAATAGTTTCAGTGTTATTTATCTTCATTGCA  500

seq1  TTGCATGGTAAATGATGCCACTCCTACTAGCATGGTATGACCAATAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGGTAAATGATGCCACTCCTACTAGCATGGTATGACCAATAGGCC  550

seq1  ATCAGTATTCTGGCCACCCATGGCCAGGGTGCCTGTACAGCTGACAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATTCTGGCCACCCATGGCCAGGGTGCCTGTACAGCTGACAACTG  600

seq1  GCTCAATACCAGACTTTCCTATAATCTGAATATTGAGGATGTGGTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATACCAGACTTTCCTATAATCTGAATATTGAGGATGTGGTTACAT  650

seq1  AAATAAGCATACGGAAACATTTTCATGTATCTCGTGATTAAACAGCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCATACGGAAACATTTTCATGTATCTCGTGATTAAACAGCATCT  700

seq1  AAAAATGTGACGTATAATCAATAAATATTCACAGAATAGCTCAATCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTGACGTATAATCAATAAATATTCACAGAATAGCTCAATCAACA  750

seq1  AATACAATAGTTACCGATAGTCAAAAGTAATTTAGTCATTTTTAGATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATAGTTACCGATAGTCAAAAGTAATTTAGTCATTTTTAGATTTA  800

seq1  ACAGGAAAATCCTTTAATAATAAAATTTTTAAAATTTATTTGAGTAACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAATCCTTTAATAATAAAATTTTTAAAATTTATTTGAGTAACTC  850

seq1  ATTGGCTGACTCTATAGTCCTACTTGTTCTGAAAATGTCTTTTCACTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTGACTCTATAGTCCTACTTGTTCTGAAAATGTCTTTTCACTCAA  900

seq1  CAACACTCTCCGTCATACATATAGATTTTAATTGGCAGCCTCTACCCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTCTCCGTCATACATATAGATTTTAATTGGCAGCCTCTACCCACA  950

seq1  AAAG-TCAGTGTGAGGGGAAGCACCTAGCCTGGCAGAGACTTGAAGTGCC  999
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAGTTCAGTGTGAGGGGAAGCACCTAGCCTGGCAGAGACTTG-AGTGCC  999

seq1  AGGG-TTGGGGGACACCCAGGGGCCCCCACCTGCTCAGAGGAGAAGGAGA  1048
      |||| |||||||||||||| ||||||||| ||||||||||||| ||||||
seq2  AGGGTTTGGGGGACACCCA-GGGCCCCCA-CTGCTCAGAGGAG-AGGAGA  1046

seq1  GAAGAAAT  1056
      | ||||||
seq2  G-AGAAAT  1053