BAC Information

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BAC

Clone NameB6Ng01-214P03
Chromosome17 (Build37)
Map Location 77,584,602 - 77,585,755
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043886, EG624348
Downstream geneLOC545234, LOC100043887, LOC668795, LOC383275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214P03.bB6Ng01-214P03.g
ACCGA032055GA032056
length1,1531,141
definitionB6Ng01-214P03.b B6Ng01-214P03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgacatatatccttgctccccaagtgacagggagcacttgac
atcaggctccctctggaactttgtacaacaaagttgagcaagagctctgt
ggcaagtcaccaacaccttctgtctttcttatcctgatgttcagtgttcc
tccctctcatacttctctcctcagagcatcccctaaaatcacagaagtct
cttgattgtcacatcttttaggttgcccttcaaaggatgcttgcattccc
cttcactccacacaaaattattttttcttggaacccatgaacaattgatt
tttacatttgtaggtccctgaaacataactcctaatcctcagattccaga
gaactcattaaaatgggcatggggcaagagccagaggatcaggaagtttg
ctgagaaattctgtcttgtagcaatggcagaaaagtaaccccatgattat
acaacaatataattgtctaaataagattgtgataacgacaatatcaatag
atacactaacatggaaggaggtaaatctcagggtacactgtccctagaca
atgaactagagacaactaaaaactgttgagaggggaaaaaaaaaacaagt
cttaaacaagaatgagctccacatttagttgagctattaaaacctgctgt
gtgctgaatttatattgccagtcctaactattttcttcaaattcaggctt
gttcaaattatgcctatcagttttttttcaatttgaaagtctttattttt
attttttttaattaggtattttcttcatttacattaccagtgctatccca
aaagtcccccataacctcccccccggcactcctctccccacccactccat
tgttcattgggatgctctccctgtgccctctagtgagtctggctaaaggg
tttatctatcttgttgattttctcaaagaaccagctccttgtttggtgat
tctttgaatagttctctggtttccactggttgatttcgccctgagttgga
ttatttctgccatcatacctcctctgggtgaattgctgcctttttctaga
gccttaggtgggttgtgagctgcctaagtgtggtgctttctctagttttc
ttttggagttacttcagaaagcctatgggatttcctctgagaatgctttc
ata

gaattctgtactgaacccatctggtcctaggctttttttggttgtaagac
ttttaatgagagcttctatttctttaggatttatggaactgtttagatgg
tttatctgatcctgatttaactttggtatttggtatcattctagacaatt
gtccatttcatccagattttcaatttttgttgagtataggcttttgtagt
aggatctgataattttttgaatttcctcaatttctgttgttatgtctccc
ttttcctttctgattttgttaatttggacactatctctgattcttctggt
gagtctgcctaagggtttacccattttgctgatttttctctaagaaccag
ctcctgtttcagttaattctttgtatagtctttttgtttctagttggttg
atttcatcccttagtttattatttttctgccttttaaacctcttgagtgt
atttctttttgttttagagctttcaggtgtgccatcaagctgctagtata
tgctctttccattttccttttggaggcacttggagctatgaattttcctc
ttagcactgttttattgtgtcccataaatttgggtacgttgtgcttcatt
ttcattaaattctaaaaagtctttaattactttcttttaaaatttaaaat
ttttaatttcttccttgaccaagttatctttgaggatagagttattcagc
ttccatgtgtatttgggttttcttgttttactagactccagagaaccaaa
taatcctattaaaaatggtgaacagagtgaaccagacaatactcaactaa
gcacctaaagaaatgttcaatatcttttgtcataagggaaatgcaaatca
aaatgaccaacatttacacagtggagaggagtgccagggaggttgtcagg
cagcaggagttgggggctccttggtgtcaggcttgagcatgtctgtctgg
gagaatgttccattccttgtaagaatttctactgaatctctggagtagtc
tcgttcaaccagaaaacagctgcattcaccagtccaataggtggtgaagc
cagagcagttagggtggtgagggaaccccctcatagactaggtaatgggc
attgggatagggcttcaagatgcaaagagggataaggataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77584602_77585755
seq2: B6Ng01-214P03.b_47_1199

seq1  GAATTCAGTGACATATATCCTTGCTCCCCAAGTGACAGGGAGCACTTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGACATATATCCTTGCTCCCCAAGTGACAGGGAGCACTTGAC  50

seq1  ATCAGGCTCCCTCTGGAACTTTGTACAACAAAGTTGAGCAAGAGCTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCTCCCTCTGGAACTTTGTACAACAAAGTTGAGCAAGAGCTCTGT  100

seq1  GGCAAGTCACCAACACCTTCTGTCTTTCTTATCCTGATGTTCAGTGTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTCACCAACACCTTCTGTCTTTCTTATCCTGATGTTCAGTGTTCC  150

seq1  TCCCTCTCATACTTCTCTCCTCAGAGCATCCCCTAAAATCACAGAAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCATACTTCTCTCCTCAGAGCATCCCCTAAAATCACAGAAGTCT  200

seq1  CTTGATTGTCACATCTTTTAGGTTGCCCTTCAAAGGATGCTTGCATTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTGTCACATCTTTTAGGTTGCCCTTCAAAGGATGCTTGCATTCCC  250

seq1  CTTCACTCCACACAAAATTATTTTTTCTTGGAACCCATGAACAATTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTCCACACAAAATTATTTTTTCTTGGAACCCATGAACAATTGATT  300

seq1  TTTACATTTGTAGGTCCCTGAAACATAACTCCTAATCCTCAGATTCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTGTAGGTCCCTGAAACATAACTCCTAATCCTCAGATTCCAGA  350

seq1  GAACTCATTAAAATGGGCATGGGGCAAGAGCCAGAGGATCAGGAAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCATTAAAATGGGCATGGGGCAAGAGCCAGAGGATCAGGAAGTTTG  400

seq1  CTGAGAAATTCTGTCTTGTAGCAATGGCAGAAAAGTAACCCCATGATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAATTCTGTCTTGTAGCAATGGCAGAAAAGTAACCCCATGATTAT  450

seq1  ACAACAATATAATTGTCTAAATAAGATTGTGATAACGACAATATCAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATATAATTGTCTAAATAAGATTGTGATAACGACAATATCAATAG  500

seq1  ATACACTAACATGGAAGGAGGTAAATCTCAGGGTACACTGTCCCTAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTAACATGGAAGGAGGTAAATCTCAGGGTACACTGTCCCTAGACA  550

seq1  ATGAACTAGAGACAACTAAAAACTGTTGAGAGGGGAAAAAAAAAACAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAGAGACAACTAAAAACTGTTGAGAGGGGAAAAAAAAAACAAGT  600

seq1  CTTAAACAAGAATGAGCTCCACATTTAGTTGAGCTATTAAAACCTGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACAAGAATGAGCTCCACATTTAGTTGAGCTATTAAAACCTGCTGT  650

seq1  GTGCTGAATTTATATTGCCAGTCCTAACTATTTTCTTCAAATTCAGGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGAATTTATATTGCCAGTCCTAACTATTTTCTTCAAATTCAGGCTT  700

seq1  GTTCAAATTATGCCTATCAGTTTTTTTTCAATTTGAAAGTCTTTATTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATTATGCCTATCAGTTTTTTTTCAATTTGAAAGTCTTTATTTTT  750

seq1  ATTTTTTTTAATTAGGTATTTTCTTCATTTACATTACCAGTGCTATCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTAATTAGGTATTTTCTTCATTTACATTACCAGTGCTATCCCA  800

seq1  AAAGTCCCCCATAACCTCCCCCCCGGCACTCCTCTCCCCACCCACTCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCCCATAACCTCCCCCCCGGCACTCCTCTCCCCACCCACTCCAT  850

seq1  TGTTCATTGGGATGCTCTCCCTGTGCCCTCTAGTGAGTCTGGCT-AAGGG  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTTCATTGGGATGCTCTCCCTGTGCCCTCTAGTGAGTCTGGCTAAAGGG  900

seq1  TTTATCTATCTTGTTGATTTTCTCAAAGAACCAGCTCCTTGTTTGGTTGA  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTATCTATCTTGTTGATTTTCTCAAAGAACCAGCTCCTTGTTTGG-TGA  949

seq1  TTCTTTGAATAGTTCTTCTTGTTTCCACCTGGTTGATTTCGCCCCTGAGT  999
      ||||||||||||||| ||| ||||||| ||||||||||||| ||||||||
seq2  TTCTTTGAATAGTTC-TCTGGTTTCCA-CTGGTTGATTTCG-CCCTGAGT  996

seq1  TTGATTATTTCCTGCCATC-TA-CTCCTCTTGGGTGAATTTGCTGCCTTT  1047
      | |||||||| |||||||| || |||||| |||||||| |||||||| ||
seq2  TGGATTATTT-CTGCCATCATACCTCCTC-TGGGTGAA-TTGCTGCC-TT  1042

seq1  TTTCTAGAGCTTTTAGGTTGGTTGTGAAGCTGC--TAGTGT-GTGCTTTC  1094
      ||||||||||  |||||| ||||||| ||||||   ||||| ||||||||
seq2  TTTCTAGAGC-CTTAGGTGGGTTGTG-AGCTGCCTAAGTGTGGTGCTTTC  1090

seq1  TCTAGTTTCTTTTTGGAGGTAC-TCAGA---GCTATGGGTTTCCCTCTTA  1140
      ||||||||  |||||||| ||| |||||    ||||||| || ||||| |
seq2  TCTAGTTTTCTTTTGGAGTTACTTCAGAAAGCCTATGGGATTTCCTCTGA  1140

seq1  GAAATGCTTTCATA  1154
      | ||||||||||||
seq2  G-AATGCTTTCATA  1153


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