BAC Information

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BAC

Clone NameB6Ng01-215H02
Chromosome17 (Build37)
Map Location 37,916,567 - 37,917,512
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122
Downstream geneOlfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215H02.bB6Ng01-215H02.g
ACCGA032410GA032411
length1,204971
definitionB6Ng01-215H02.b B6Ng01-215H02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaagaggaaaactcatagctctgagtgccgccaaaaagaagct
agagagagtatacaccagcagcttgacagcacacttaaaagctcaatcaa
aagaaagcaaattcacccaagaggtgtagacagcaggaaataatcaaact
tagggctgaaatcaaccaagtggaaacaaaaagaactatacaaagaatca
accaaccccggagctgtttttcttttgagaaaatcaacaagatagataaa
accttagccaaactaactagagggcacaggaacagtatggtaattaacaa
aatcagaaataaaaaaggagacataacaacagaacatgaggaaatccaaa
acatcatcagatcctactacaaaaggctatactcaacaaaactggaaacc
ttggatgcaatggacaattttgtagacagataccaggtaccatagttaaa
tcaggatcagattaacaatctaaacaggcccatttcccctaaagaaataa
aagctgtcattaatcatctccctaccaaaagaatatcccaggaccagatg
ggtttagtgcagagttctatcagaccttcagagaagacctatttgcaata
ctcctcaaactattccacaaaataaaaagagaaggtactctacccaattc
attctatgaagccacattactctgatacctaaaccacaaaaagacccaac
aaagaaagagaacttcagaccaatttcccttatgaacatccatgcaaaaa
taataaaattctcacaaaccgaatccaagaacacatcaaaatgatcatcc
aacatgatcaagtaggcttcatcccagggatgcacggatggtttaatata
tggaaatctatcaacgcaatccagtatataaacaaacgcaaagacaaacc
cacatgatcatctcattagatgatgagaaaccatttgacaaaattcaaca
cccattcatgataaaaagtcttggaaagatcagaattcaaggctcatatc
taaacataataaaagcaatatgcagccaacagttagtcacattcaaggta
aatgggaggagagctgtagcatccacttaaaattcagggactagacaggc
tgcccacttcctcttacctatccataagaacctgagcttatttgcgaatt
gtgggattcttgccttaacttatgggagggaaactagagagcactatgag
ctgg
gaattcaaagtacttttttagtttacagatgatattatttgacatataaa
atgctctgaaacttctaccagaaaactcctacaggtaataaacattcctc
caaggagcaggatgtaaaattattacacaaacaatagtaactttctctat
acagatggcagatatactgagaaagaaatcatgaaaaataccattcacaa
tagtccttaaactattatggaataaatctaaaaagtgatatatttttaca
gtgaaaaatttaagacacagaggaaaaaaatgaagaaactaccagaagat
gaaaagaccttatttcatattctgaaaaagccattctatcaaaagcaatc
tccagatttaatgcaatttcaatcaagtatgtctttatacaaatctagca
tatatattttgtgtttgctgttttcacagtttgcatacatattttatttc
atgtaatgggtcaataaatattttatattgttttacatctatattttgct
ttcctctttaaaccactctgctgaaatagtttattcagtttgttcttttt
gattagttatattatctaaatttcttcttacagatataaagtcagaatta
tcagtaaggatgactcaaagaaataatgaccaaatccaattttagcagcc
caatatgttttcagattaccaggctttctctgaccatctttagctggact
aaaactcttttttctggccacctcggtcattgacattgtgatgctgacac
agaacacaatgatcatacttgtgtcattttttaaactccagacttccaaa
acaccccatgtacttctttccttctccaattttttttcctagatttttgt
ttttatgacaaaatgtttctttagaatagtctagactttccaaagggccc
aagagaaagaatcactccatggctgtgcaatccatgtctaacatttggtt
ctgtggactgggacttcacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37916567_37917512
seq2: B6Ng01-215H02.g_66_1036 (reverse)

seq1  TTGTGAAGT-CCAGT-CACAGAAC--AATG-TAGACATGGATTGCACAG-  44
      ||||||||| ||||| ||||||||  |||| |||||||||||||||||| 
seq2  TTGTGAAGTCCCAGTCCACAGAACCAAATGTTAGACATGGATTGCACAGC  50

seq1  CAT-GAGTGAT--CTTCTCT--GGGCCTTTGG-AAGTCTAGACTA-TCTA  87
      ||| |||||||   ||||||  || ||||||| |||||||||||| ||||
seq2  CATGGAGTGATTCTTTCTCTTGGGCCCTTTGGAAAGTCTAGACTATTCTA  100

seq1  AAG-AACA-TTTGTCAT-AAAACATAAATCTAGGAAGAAAAAATTGGAGA  134
      ||| |||| |||||||| |||||| ||||||||||| |||||||||||||
seq2  AAGAAACATTTTGTCATAAAAACAAAAATCTAGGAA-AAAAAATTGGAGA  149

seq1  --GGAAGAAGTACAT-GGGTGTTT--GGAGTCTGGAGTTT-AAAAATGAC  178
        | ||||||||||| ||||||||  | |||||||||||| |||||||||
seq2  AGGAAAGAAGTACATGGGGTGTTTTGGAAGTCTGGAGTTTAAAAAATGAC  199

seq1  ACAAGTATGATCATTGTGTTCTGTGTCAGCATCACAATGTCAATGACCGA  228
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATGATCATTGTGTTCTGTGTCAGCATCACAATGTCAATGACCGA  249

seq1  GGTGGCCAG-AAAAAGAG-TTTAGTCCAGCTAAAGATGGTCAGAG-AAGC  275
      ||||||||| |||||||| |||||||||||||||||||||||||| ||||
seq2  GGTGGCCAGAAAAAAGAGTTTTAGTCCAGCTAAAGATGGTCAGAGAAAGC  299

seq1  CTGGTAATCTG-AAACATATTGGGCTGCTAAAATTGGATTTGGTCATTAT  324
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATCTGAAAACATATTGGGCTGCTAAAATTGGATTTGGTCATTAT  349

seq1  TTCTTTGAGTCATCCTTACTGATAATTCTGACTTTATATCTGTAAGAAGA  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGTCATCCTTACTGATAATTCTGACTTTATATCTGTAAGAAGA  399

seq1  AATTTAGATAATATAACTAATCAAAAAGAACAAACTGAATAAACTATTTC  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGATAATATAACTAATCAAAAAGAACAAACTGAATAAACTATTTC  449

seq1  AGCAGAGTGGTTTAAAGAGGAAAGCAAAATATAGATGTAAAACAATATAA  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTGGTTTAAAGAGGAAAGCAAAATATAGATGTAAAACAATATAA  499

seq1  AATATTTATTGACCCATTACATGAAATAAAATATGTATGCAAACTGTGAA  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTATTGACCCATTACATGAAATAAAATATGTATGCAAACTGTGAA  549

seq1  AACAGCAAACACAAAATATATATGCTAGATTTGTATAAAGACATACTTGA  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAACACAAAATATATATGCTAGATTTGTATAAAGACATACTTGA  599

seq1  TTGAAATTGCATTAAATCTGGAGATTGCTTTTGATAGAATGGCTTTTTCA  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTGCATTAAATCTGGAGATTGCTTTTGATAGAATGGCTTTTTCA  649

seq1  GAATATGAAATAAGGTCTTTTCATCTTCTGGTAGTTTCTTCATTTTTTTC  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGAAATAAGGTCTTTTCATCTTCTGGTAGTTTCTTCATTTTTTTC  699

seq1  CTCTGTGTCTTAAATTTTTCACTGTAAAAATATATCACTTTTTAGATTTA  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTCTTAAATTTTTCACTGTAAAAATATATCACTTTTTAGATTTA  749

seq1  TTCCATAATAGTTTAAGGACTATTGTGAATGGTATTTTTCATGATTTCTT  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAATAGTTTAAGGACTATTGTGAATGGTATTTTTCATGATTTCTT  799

seq1  TCTCAGTATATCTGCCATCTGTATAGAGAAAGTTACTATTGTTTGTGTAA  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTATATCTGCCATCTGTATAGAGAAAGTTACTATTGTTTGTGTAA  849

seq1  TAATTTTACATCCTGCTCCTTGGAGGAATGTTTATTACCTGTAGGAGTTT  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTACATCCTGCTCCTTGGAGGAATGTTTATTACCTGTAGGAGTTT  899

seq1  TCTGGTAGAAGTTTCAGAGCATTTTATATGTCAAATAATATCATCTGTAA  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAGAAGTTTCAGAGCATTTTATATGTCAAATAATATCATCTGTAA  949

seq1  ATTAAAAAAGTACTTTGAATTC  946
      | ||||||||||||||||||||
seq2  ACTAAAAAAGTACTTTGAATTC  971