BAC Information

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BAC

Clone NameB6Ng01-217O12
Chromosome17 (Build37)
Map Location 19,595,069 - 19,596,151
singlet/doubletsinglet
Overlap genenone
Upstream geneVmn2r-ps114, EG433070, Vmn2r-ps115, Vmn2r-ps117, LOC100042183, EG627367, EG224552, LOC665344, LOC627466, LOC627476, EG665371, EG665376
Downstream geneEG627537, EG627576, EG224572, EG627618, EG627636, LOC100042273, LOC210465, LOC670534, EG627664, V2r7, LOC100041856, EG545190, Fpr-rs7, Fpr-rs6, EG627743, EG224576, V2r6, EG637720, EG665525, EG627805
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217O12.bB6Ng01-217O12.g
ACCGA034175GA034176
length1,0771,195
definitionB6Ng01-217O12.b B6Ng01-217O12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatatcaccttggattttagcttggttactcatggagcactgtt
gagaaactgagcattaaagaagttttgtctgtgtacttgaatcgagtggc
ttcttttcccttgttttaagattttattttcatttgcttttccctggtga
ctgaagactttgataatttctttaactgcttcttggcccttgaggttcct
ctgttgagaattctgtttagctctgtatgtgaccatttttaatttgggtt
atttagattgtccatgtttaaaattttagttcttcaaattttttggatat
tagcccaatgactgatgcagggtggatgaagttcccttcacaatttatgt
tcttatgttttgtcctatgcacagtgtcctttgtcttacagaaaatttgc
aatataatgatatgctacttctcactttttgtcttaaacgctgagccatt
tttattcttttcaggaaattgtctattatactaatgcattcaaggttttt
tttctctctttcccttctaacagatttattggaccaaatttttattttgg
tcattgatccacttgaacatgaaatttgcagagggtgacaaacatgtatc
tattttcattcttctacatgtagacttccagtaatactagtaccattttt
ttatgatactctatttttttctgtgtatgtttttgttttcttcatcaaaa
tcaagtgtcgccaggtatgggcatctatttctgggccacttacacaaatt
cattgatcactgtctgttttctgtaccaatactctgtatttttattacta
ttgttctgtagagctgcttgaaattagcaatgttcaatttacacaagtta
ttttatttttcaagatgattttgtttatatgaagtttgggttttgttgtt
gttgtggttgttgttgctgttgtttcccaaaagagtttgacattctgaat
ttgaatctacaatcaatggagatgaggaaggtagaggactctcatgagag
acagattctgggatctcagagcatccagaatcaatggggggtgtcgataa
tgtgattcacaacatggggcaatggac
gaattcattcaattttattaatcaaagtatctatgtatataccaatatca
tacatataatttttattgctctatagttcagtttgatattagaattgtca
tacctctttaagtattgtgtagtattgtagatgtctcaattatttgtttt
tcaatgtgactcagaacgtttttccaggcatataataaattgtgctggaa
ttttggtgggaattgaatctgtagtattcccttggtaggattactattat
tattattttttaatcctttcaattcatgatgggaaaatcttcccatattc
tgatatcaatactttctttcttcaatgacttgaagatcatgtcacacttg
atttacacttctttggttagagttccaacagatactttcatattatttgt
agctactgtgaagggtgttctttcgttgattttatttaaagtccattaac
catttgtataaaggagagccacaaataattttgagataactttgtatcag
tatactgtactgaaaatgtttttcagatttggtaggtcctaggttagatt
tttgctttggttcatttatattattatatcatctgcaacttgctgtactt
tgactcatttttaaaaaaaaaatatttgtattttccttgtcttatggctc
tatctaaaacatagagttctatattgaatgcacattgtgtgaaaagactt
gtcttatccctgattttgatggagttcttttacatttatctccctttaat
tgatgttggttcttggtttgttgtatattgctgcaatttagaataggtat
gtacattttatctctaatatgttcaagaagtttatgatcaaatggaccta
acttttgcaaaaattattttcaccatctaatggtgtttgtcattttctcc
agtttgattatatggtggattacattgaccacattttttttcaacctaca
tctctagtatgaggagctatcctttgatcatggtagatatttttttatat
gttcctagattccatttgttatttttttatggagtacatttctatcatat
catgaggaccataaatctggaagtccaccttctttcctgatcttttgatg
ttcgaatatcagtgttaaattgcgtcagtagaaactatttgcactctctg
gtactggttatggtaactcaatagatgcggtgatatgtctactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_19595069_19596151
seq2: B6Ng01-217O12.b_49_1125

seq1  GAATTCCATATCACCTTGGATTTTAGCTTGGTTACTCATGGAGCACTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATCACCTTGGATTTTAGCTTGGTTACTCATGGAGCACTGTT  50

seq1  GAGAAACTGAGCATTAAAGAAGTTTTGTCTGTGTACTTGAATCGAGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTGAGCATTAAAGAAGTTTTGTCTGTGTACTTGAATCGAGTGGC  100

seq1  TTCTTTTCCCTTGTTTTAAGATTTTATTTTCATTTGCTTTTCCCTGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCCCTTGTTTTAAGATTTTATTTTCATTTGCTTTTCCCTGGTGA  150

seq1  CTGAAGACTTTGATAATTTCTTTAACTGCTTCTTGGCCCTTGAGGTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACTTTGATAATTTCTTTAACTGCTTCTTGGCCCTTGAGGTTCCT  200

seq1  CTGTTGAGAATTCTGTTTAGCTCTGTATGTGACCATTTTTAATTTGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAGAATTCTGTTTAGCTCTGTATGTGACCATTTTTAATTTGGGTT  250

seq1  ATTTAGATTGTCCATGTTTAAAATTTTAGTTCTTCAAATTTTTTGGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATTGTCCATGTTTAAAATTTTAGTTCTTCAAATTTTTTGGATAT  300

seq1  TAGCCCAATGACTGATGCAGGGTGGATGAAGTTCCCTTCACAATTTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCAATGACTGATGCAGGGTGGATGAAGTTCCCTTCACAATTTATGT  350

seq1  TCTTATGTTTTGTCCTATGCACAGTGTCCTTTGTCTTACAGAAAATTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGTTTTGTCCTATGCACAGTGTCCTTTGTCTTACAGAAAATTTGC  400

seq1  AATATAATGATATGCTACTTCTCACTTTTTGTCTTAAACGCTGAGCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATGATATGCTACTTCTCACTTTTTGTCTTAAACGCTGAGCCATT  450

seq1  TTTATTCTTTTCAGGAAATTGTCTATTATACTAATGCATTCAAGGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTTTTCAGGAAATTGTCTATTATACTAATGCATTCAAGGTTTTT  500

seq1  TTTCTCTCTTTCCCTTCTAACAGATTTATTGGACCAAATTTTTATTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTTTCCCTTCTAACAGATTTATTGGACCAAATTTTTATTTTGG  550

seq1  TCATTGATCCACTTGAACATGAAATTTGCAGAGGGTGACAAACATGTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGATCCACTTGAACATGAAATTTGCAGAGGGTGACAAACATGTATC  600

seq1  TATTTTCATTCTTCTACATGTAGACTTCCAGTAATACTAGTACCATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATTCTTCTACATGTAGACTTCCAGTAATACTAGTACCATTTTT  650

seq1  TTATGATACTCTATTTTTTTCTGTGTATGTTTTTGTTTTCTTCATCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATACTCTATTTTTTTCTGTGTATGTTTTTGTTTTCTTCATCAAAA  700

seq1  TCAAGTGTCGCCAGGTATGGGCATCTATTTCTGGGCCACTTACACAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGTCGCCAGGTATGGGCATCTATTTCTGGGCCACTTACACAAATT  750

seq1  CATTGATCACTGTCTGTTTTCTGTACCAATACTCTGTATTTTTATTACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATCACTGTCTGTTTTCTGTACCAATACTCTGTATTTTTATTACTA  800

seq1  TTGTTCTGTAGAGCTGCTTGAAATTAGCAATGTTCAATTTACACAAAGTT  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGTTCTGTAGAGCTGCTTGAAATTAGCAATGTTCAATTTACAC-AAGTT  849

seq1  ATTTTATTTTTCAAGATGATTTTGTTTATATGAAGTTTGGTTTTTGTTGT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTTTATTTTTCAAGATGATTTTGTTTATATGAAGTTTGGGTTTTGTTGT  899

seq1  TGTTGTGGTTGTTGTTGCTGTTGTTT-CCAAAAGAGTTTGACATTCTGAA  949
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGTTGTGGTTGTTGTTGCTGTTGTTTCCCAAAAGAGTTTGACATTCTGAA  949

seq1  TTTGAATCTACAATCAATGGAGATGAGG-AGGTAGAGGGACTCTCCATGA  998
      |||||||||||||||||||||||||||| ||||||| ||||||| |||| 
seq2  TTTGAATCTACAATCAATGGAGATGAGGAAGGTAGA-GGACTCT-CATG-  996

seq1  AGAGACAGAATCCTGGGATCTCAGAGGCATCCAAGAATCAAT-GGGGGTG  1047
      |||||||| || ||||||||||||| |||||| ||||||||| |||||||
seq2  AGAGACAG-ATTCTGGGATCTCAGA-GCATCC-AGAATCAATGGGGGGTG  1043

seq1  TCGTTAAATGTGATTCACAACATTGGGGCAATGGAC  1083
      ||| | |||||||||||||||| |||||||||||||
seq2  TCGAT-AATGTGATTCACAACA-TGGGGCAATGGAC  1077