BAC Information

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BAC

Clone NameB6Ng01-218D24
Chromosome17 (Build37)
Map Location 38,308,181 - 38,458,608
singlet/doubletdoublet
Overlap geneOlfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1
Upstream geneLOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133
Downstream geneOlfr136, LOC626985, LOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218D24.bB6Ng01-218D24.g
ACCGA034427GA034428
length1,1261,166
definitionB6Ng01-218D24.b B6Ng01-218D24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,308,181 - 38,309,305)(38,457,427 - 38,458,608)
sequence
gaattctttcccagggaattttgtctaggcaatgaggacaagggtaaatg
agttgtccgtgaaaacaatgaacaggactcttgggaatagcaaagaaaca
tgatgacataaaagccttcttggtgttctctattatcatttccctaatgt
gagctttccctccttttggcttctttagtatgaactaaaaacctgagagt
tctgaagcaaatcttaaactatcaccttcatactagaatatccctgtcct
gtgaaaacgaaaaactgtaatatcttcccttgtaactatttttttaaaca
aataaagggagtttatcaaaataaggtaagtgagacacctgtatttccta
ggaaaaggatactgcagtcctagaaaaggtggaaagtgtgggctgcagta
tctaattagtacacaggaaagacagcttcatttcaaaaagcctttcataa
actttggctatacctatttcagtggttctaggaacaactagacttttaag
ttttaacacatttctttctcattctatcactgaagccaaaagaatcattt
aagtttctataagcaatatatttctcataggttgattacctgagagaagt
attaatgtttagccatttgatcatataaaaacatgtttaaaataagatta
atcttgtttatttgtttcatctaatgcttttgtgtatggtaaaattattt
tttaattaagggtgtttaaaactaaagacagctttttgcaacatacaaag
gccaaaatactgtaaatataagcaaaatggtgtgtgtcttatcaagcaga
atatgaatgtaatatgttggtataaaaatgcaatttggcatatggacagc
attcaacagaaatacagcctgattttgatcagtgattttaaacactcctg
gatggatatatccctgtgagttgaaattgttgcatcactgaacaagaaaa
ttaaaggttctcttctttctcccattccagtccacctacaaaatctattc
cattttccattcccagggaatattacgcatcttgccttagaccattcctc
tttatctaacttctctgggatctggtggattattagtggtatcctttact
gacagtattatccaggtattgttgaa
gaattcagacttcagtgaaaatgaaggcagaacatacccaaatttatggg
aaacaaagaaagccgtgctaagaagaaagttatagtagtaagtgcctctg
gaaagaaattagagagttgtcttaccaacaatttaaaagtacatctgaac
actctaagaaagtgtaaacacacagaagaggataagatggcaggaaataa
tcagaatctgggcagaaatcatactaagttttaaaaaaacaaaacaaaac
aaaatggtaacactacaaagaatcaacaaaggtaagacctggatttctga
gaaatttaataagataaacaaagataaacaaagccttgaatttccaccgc
actctggtagagtcagcttgacgggcagtgatgcctaaaaaccactcatg
aggcaaagagttttaaggaagctctcctcctggagttttggcattctcat
tctcattttgttgttttccttggaaggccttctattttctcataaagaaa
cacaatatatcatgaataatactgtcgcctttacaatgtttacaaagaag
taattgaaagatgcttgaaatttaatgttaagtattctgacaaagctgga
attaaataattctactaaaaaatccaactaactaaagcgaaaataaaaac
agactaacaaaaccagttctttccattagtttatgttcccacacatgtcc
atcaacagcttatgtagttcacattcttaaaacattttctcatcattttt
ttttttaaataaaattgcattaacttttctttctagtttaagagtacata
gtccgagatttgaaaatataaaaacattcatagatttgaaagtactctgg
cactttattaccatggattaattcatccaaatcaattaaaaatgaactct
gaatacataatgtaagctttcaaaagaagtagtcaagtaacagccctacc
atattttgatgcctatgaatcaatgattaatgtggtagaatagccctaaa
gtgcagtagtggcagatatcttggtggttaacaatcagctcttctaatga
ttaagcctcactcactagaaaaaatcacacttgattcttgaaatctagct
attactcagtggagagaagaagtattaataattcttccaatgtataaatt
gaacttggggaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38308181_38309305
seq2: B6Ng01-218D24.b_43_1168

seq1  GAATTCTTTCCCAGGGAATTTTGTCTAGGCAATGAGGACAAGGGTAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCAGGGAATTTTGTCTAGGCAATGAGGACAAGGGTAAATG  50

seq1  AGTTGTCCGTGAAAACAATGAACAGGACTCTTGGGAATAGCAAAGAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCGTGAAAACAATGAACAGGACTCTTGGGAATAGCAAAGAAACA  100

seq1  TGATGACATAAAAGCCTTCTTGGTGTTCTCTATTATCATTTCCCTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACATAAAAGCCTTCTTGGTGTTCTCTATTATCATTTCCCTAATGT  150

seq1  GAGCTTTCCCTCCTTTTGGCTTCTTTAGTATGAACTAAAAACCTGAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTCCCTCCTTTTGGCTTCTTTAGTATGAACTAAAAACCTGAGAGT  200

seq1  TCTGAAGCAAATCTTAAACTATCACCTTCATACTAGAATATCCCTGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCAAATCTTAAACTATCACCTTCATACTAGAATATCCCTGTCCT  250

seq1  GTGAAAACGAAAAACTGTAATATCTTCCCTTGTAACTATTTTTTTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAACGAAAAACTGTAATATCTTCCCTTGTAACTATTTTTTTAAACA  300

seq1  AATAAAGGGAGTTTATCAAAATAAGGTAAGTGAGACACCTGTATTTCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGGAGTTTATCAAAATAAGGTAAGTGAGACACCTGTATTTCCTA  350

seq1  GGAAAAGGATACTGCAGTCCTAGAAAAGGTGGAAAGTGTGGGCTGCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGATACTGCAGTCCTAGAAAAGGTGGAAAGTGTGGGCTGCAGTA  400

seq1  TCTAATTAGTACACAGGAAAGACAGCTTCATTTCAAAAAGCCTTTCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTAGTACACAGGAAAGACAGCTTCATTTCAAAAAGCCTTTCATAA  450

seq1  ACTTTGGCTATACCTATTTCAGTGGTTCTAGGAACAACTAGACTTTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCTATACCTATTTCAGTGGTTCTAGGAACAACTAGACTTTTAAG  500

seq1  TTTTAACACATTTCTTTCTCATTCTATCACTGAAGCCAAAAGAATCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACACATTTCTTTCTCATTCTATCACTGAAGCCAAAAGAATCATTT  550

seq1  AAGTTTCTATAAGCAATATATTTCTCATAGGTTGATTACCTGAGAGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTATAAGCAATATATTTCTCATAGGTTGATTACCTGAGAGAAGT  600

seq1  ATTAATGTTTAGCCATTTGATCATATAAAAACATGTTTAAAATAAGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGTTTAGCCATTTGATCATATAAAAACATGTTTAAAATAAGATTA  650

seq1  ATCTTGTTTATTTGTTTCATCTAATGCTTTTGTGTATGGTAAAATTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTTATTTGTTTCATCTAATGCTTTTGTGTATGGTAAAATTATTT  700

seq1  TTTAATTAAGGGTGTTTAAAACTAAAGACAGCTTTTTGCAACATACAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAAGGGTGTTTAAAACTAAAGACAGCTTTTTGCAACATACAAAG  750

seq1  GCCAAAATACTGTAAATATAAGCAAAATGGTGTGTGTCTTATCAAGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATACTGTAAATATAAGCAAAATGGTGTGTGTCTTATCAAGCAGA  800

seq1  ATATGAATGTAATATGTTGGTATAAAAATGCAATTTGGCATATGGACAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAATGTAATATGTTGGTATAAAAATGCAATTTGGCATATGGACAGC  850

seq1  ATTCAACAGAAATACAGCCTGATTTTGATCAGTGATTTTAAACACTCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACAGAAATACAGCCTGATTTTGATCAGTGATTTTAAACACTCCTG  900

seq1  GATGGATATATCCCTGTGAGTTGAAATTGTTGCATCACTGAACAAGAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATATATCCCTGTGAGTTGAAATTGTTGCATCACTGAACAAGAAAA  950

seq1  TTAAAGGTTCTCTTCTTTCTCCCATTCCAGTCCACCTACAAAATCTATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTTCTCTTCTTTCTCCCATTCCAGTCCACCTACAAAATCTATTC  1000

seq1  CATTTTCCATTCCCAGGGAATATTACGCATC-TGCCTTAGACCATTCCTC  1049
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATTTTCCATTCCCAGGGAATATTACGCATCTTGCCTTAGACCATTCCTC  1050

seq1  TTTATCTAACTTCTCT-GGATCT-GTGGATTATAAGTGTTATTCTTTACT  1097
      |||||||||||||||| |||||| ||||||||| |||| ||| |||||| 
seq2  TTTATCTAACTTCTCTGGGATCTGGTGGATTATTAGTGGTATCCTTTAC-  1099

seq1  TGACAGTTATTATCCAGTTATTGTTGAA  1125
      |||||| |||||||||| ||||||||||
seq2  TGACAG-TATTATCCAGGTATTGTTGAA  1126

seq1: chr17_38457427_38458608
seq2: B6Ng01-218D24.g_64_1229 (reverse)

seq1  AAAAATCCCCAAGTACAATTTTTATACATTATGAAAAGAAATTTATTTAA  50
      |||| ||||||||| |||  ||||||||||     |||||  |||||  |
seq2  AAAATTCCCCAAGTTCAA--TTTATACATT---GGAAGAA--TTATT--A  41

seq1  TTACCT-TTCTCTCTCACTGAGTAATTAGCTAGATTTCAAGTATCAAGTG  99
       ||| | ||||||| |||||||||| ||||||||||||||| ||||||||
seq2  ATACTTCTTCTCTC-CACTGAGTAA-TAGCTAGATTTCAAGAATCAAGTG  89

seq1  TGATTTTTTTTTCTAGTTGAGTGAGCCTTAAATCCAATTAG-AGAGCTGA  148
      |||   |||||||||| |||||||| ||| ||||  ||||| ||||||||
seq2  TGA---TTTTTTCTAG-TGAGTGAGGCTT-AATC--ATTAGAAGAGCTGA  132

seq1  TTGTT-ACCACCAAGATATCTGGCCACTACTGCACCTTTAGGGCTATTCT  197
      ||||| ||||||||||||||| |||||||||||| |||||||||||||||
seq2  TTGTTAACCACCAAGATATCT-GCCACTACTGCA-CTTTAGGGCTATTCT  180

seq1  ACCACATTAATCATTGATTCATAGGCATCAAAATATGGTAGGGCTGTTAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTAATCATTGATTCATAGGCATCAAAATATGGTAGGGCTGTTAC  230

seq1  TTGACTACTTCTTTTGGAAGCTTACATTATGTATTCAGAGTTCATTTTTA  297
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGACTACTTCTTTTGAAAGCTTACATTATGTATTCAGAGTTCATTTTTA  280

seq1  ATTGATTTGGATGAATTAATCCATGGTAATAAAGTGCCAGAGTACTTTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTGGATGAATTAATCCATGGTAATAAAGTGCCAGAGTACTTTCA  330

seq1  AATCTATGAATGTTTTTATATTTTCAAATCTCGGACTATGTACTCTTAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATGAATGTTTTTATATTTTCAAATCTCGGACTATGTACTCTTAAA  380

seq1  CTAGAAAGAAAAGTTAATGCAATTTTATTT-AAAAAAAAAATGATGAGAA  446
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTAGAAAGAAAAGTTAATGCAATTTTATTTAAAAAAAAAAATGATGAGAA  430

seq1  AATGTTTTAAGAATGTGAACTACATAAGCTGTTGATGGACATGTGTGGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTAAGAATGTGAACTACATAAGCTGTTGATGGACATGTGTGGGA  480

seq1  ACATAAACTAATGGAAAGAACTGGTTTTGTTAGTCTGTTTTTATTTTCGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACTAATGGAAAGAACTGGTTTTGTTAGTCTGTTTTTATTTTCGC  530

seq1  TTTAGTTAGTTGGATTTTTTAGTAGAATTATTTAATTCCAGCTTTGTCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTAGTTGGATTTTTTAGTAGAATTATTTAATTCCAGCTTTGTCAG  580

seq1  AATACTTAACATTAAATTTCAAGCATCTTTCAATTACTTCTTTGTAAACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTAACATTAAATTTCAAGCATCTTTCAATTACTTCTTTGTAAACA  630

seq1  TTGTAAAGGCGACAGTATTATTCATGATATATTGTGTTTCTTTATGAGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGGCGACAGTATTATTCATGATATATTGTGTTTCTTTATGAGAA  680

seq1  AATAGAAGGCCTTCCAAGGAAAACAACAAAATGAGAATGAGAATGCCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGGCCTTCCAAGGAAAACAACAAAATGAGAATGAGAATGCCAAA  730

seq1  ACTCCAGGAGGAGAGCTTCCTTAAAACTCTTTGCCTCATGAGTGGTTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGGAGGAGAGCTTCCTTAAAACTCTTTGCCTCATGAGTGGTTTTT  780

seq1  AGGCATCACTGCCCGTCAAGCTGACTCTACCAGAGTGCGGTGGAAATTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCACTGCCCGTCAAGCTGACTCTACCAGAGTGCGGTGGAAATTCA  830

seq1  AGGCTTTGTTTATCTTTGTTTATCTTATTAAATTTCTCAGAAATCCAGGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGTTTATCTTTGTTTATCTTATTAAATTTCTCAGAAATCCAGGT  880

seq1  CTTACCTTTGTTGATTCTTTGTAGTGTTACCATTTTGTTTTGTTTTGTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTTTGTTGATTCTTTGTAGTGTTACCATTTTGTTTTGTTTTGTTT  930

seq1  TTTTAAAACTTAGTATGATTTCTGCCCAGATTCTGATTATTTCCTGCCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAACTTAGTATGATTTCTGCCCAGATTCTGATTATTTCCTGCCAT  980

seq1  CTTATCCTCTTCTGTGTGTTTACACTTTCTTAGAGTGTTCAGATGTACTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCTCTTCTGTGTGTTTACACTTTCTTAGAGTGTTCAGATGTACTT  1030

seq1  TTAAATTGTTGGTAAGACAACTCTCTAATTTCTTTCCAGAGGCACTTACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTGTTGGTAAGACAACTCTCTAATTTCTTTCCAGAGGCACTTACT  1080

seq1  ACTATAACTTTCTTCTTAGCACGGCTTTCTTTGTTTCCCATAAATTTGGG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAACTTTCTTCTTAGCACGGCTTTCTTTGTTTCCCATAAATTTGGG  1130

seq1  TATGTTCTGCCTTCATTTTCACTGAAGTCTGAATTC  1182
      ||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTGCCTTCATTTTCACTGAAGTCTGAATTC  1166