BAC Information

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BAC

Clone NameB6Ng01-218N19
Chromosome17 (Build37)
Map Location 76,410,397 - 76,543,719
singlet/doubletdoublet
Overlap genenone
Upstream geneLtbp1, EG621988, Rasgrp3, 2810405J04Rik, LOC668787, LOC100043885
Downstream geneLOC100043886, EG624348
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218N19.bB6Ng01-218N19.g
ACCGA034873GA034874
length1,0251,091
definitionB6Ng01-218N19.b B6Ng01-218N19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,410,397 - 76,411,406)(76,542,631 - 76,543,719)
sequence
gaattctctttttagctcagtaccccattttaaaattgggctatttggat
tgttggtgtctattttcttgtgttcgttaaatattttgaatattagccgt
ctgtcagattggtgtcagggttggtgaaatcctttccccaaatatcccag
ggtggggtggtactcaagggggctccccttctctgaggagaaggggggca
atacggggaaggatttgtaagggttgcactgagaagaggagggagggggc
tgtgattgagaaataaagtgaataaaaatttgttttaagccaaccagttt
gacgatttatatggcaacgctatgcatctaatagaaatgtcatttacaaa
tattttgaacacatgtttaaccttgccttgacaactctgaaaaatatttg
ttcaacaagaaaatgacaatagcccagtgaacttaagggttagtctatgg
tttcatgcctaggcaattcagaagtcttagttaaattatttctttccctt
ttctctccctcttttcctctctccctcttttcaattcttcctctctccct
cattcttctttccttcctccttttgtttttatactttaggttttgtcttt
gtctgtctctttgcctctgtctgtctctctttttctctgtttctctctct
ctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtaatgcatg
atctcatgtcatgtcacaaatatgcaggtcagaggacaacatgcaggagt
cacttctgtttcttcccatcatgtgactccctgggatagaactcaggtta
tcaagccttggaggacatacacatttattctgctgagcctttttcactga
cccctaactcaatttcccgtcggcctctaaaaactccaattttcctactg
gtcctacggtcattctcagtgtgatctagaatgattgaaaaggtgcacag
atattgatcattcacactcaaaagcaatcttcattggttccaatttcagt
gtttcatgctctatcgccgacattc

gaattcctaaagtgcagggtctagtacacaggcaaattgtggaagagata
tatggagtagaaactgaagggaatctatctccaccgtgattggttattct
tgctatgggcttcttaacgttgaggctattcattgctttattgactaaga
gttcaaaaagtttcagtatcgaaaaaagaaaagtttgtttttctttcttt
ctttctttctttcttcctttcttcctttcttttcttttcttttcttttct
ttcttttctttctttcttcctttcttttcttcttttctttcattcgttca
gtgaagctcttaaaaatagagaaaactaaaaggctgcagacaaaaagtga
aaagaaagaaacacaagcagatcgcttgaacaaatttatgtaaaaagcaa
tgggaaagagactgtccaaaaaagtactggaagaagaggtaagaagccat
tccctctcatgtgccatgtcatagaaatatcacagccaggcctgtaccat
ggttaactagaaaagcatagcaaactattatctgtaaaataatggtagac
acaaaatccttcaggaatgtctggaactccataacctggataaggaattt
gttgctacacaagtggacttatgttgacacagtggactaaatcccattta
gagtacaaaacaaagactcacaaatgtaaaaatagagaaaccgtaccatt
tgtagaatggaaaactttcacttgatagtacagaataaattggaaagagt
taatatgtatttagagttcttaatatgccaaatattattagttctatgaa
tccatacaataatccgttaaaatgttattagtttggttttgtaaataata
aattaatgtaggataaaacacatgttcaaaaggttgaacatagatatatc
aacccatatcccataatggtactaaagacacagctcattggatcaaacag
atgtgcaaaggaggagacttgaattcacaacttagcaccacttaaaacct
gggcacaggcttgaaagtgataatgcaaattagtatgggaaatgagcaca
gctgcatgtgtcttccatcccacttagggagtggccaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76410397_76411406
seq2: B6Ng01-218N19.b_43_1067

seq1  GAATTCTCTTTTTAGCTCAGTACCCCATTTTAAAATTGGGCTATTTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTTAGCTCAGTACCCCATTTTAAAATTGGGCTATTTGGAT  50

seq1  TGTTGGTGTCTATTTTCTTGTGTTCGTTAAATATTTTGAATATTAGCCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTGTCTATTTTCTTGTGTTCGTTAAATATTTTGAATATTAGCCGT  100

seq1  CTGTCAGATTGGTGTCAGGGTTGGTGAAATCCTTTCCCCAAATATCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGATTGGTGTCAGGGTTGGTGAAATCCTTTCCCCAAATATCCCAG  150

seq1  GGTGGGGTGGTACTCAAGGGGGCTCCCCTTCTCTGAGGAGAAGGGGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTGGTACTCAAGGGGGCTCCCCTTCTCTGAGGAGAAGGGGGGCA  200

seq1  ATACGGGGAAGGATTTGTAAGGGTTGCACTGAGAAGAGGAGGGAGGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGGGGAAGGATTTGTAAGGGTTGCACTGAGAAGAGGAGGGAGGGGGC  250

seq1  TGTGATTGAGAAATAAAGTGAATAAAAATTTGTTTTAAGCCAACCAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGAGAAATAAAGTGAATAAAAATTTGTTTTAAGCCAACCAGTTT  300

seq1  GACGATTTATATGGCAACGCTATGCATCTAATAGAAATGTCATTTACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATTTATATGGCAACGCTATGCATCTAATAGAAATGTCATTTACAAA  350

seq1  TATTTTGAACACATGTTTAACCTTGCCTTGACAACTCTGAAAAATATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAACACATGTTTAACCTTGCCTTGACAACTCTGAAAAATATTTG  400

seq1  TTCAACAAGAAAATGACAATAGCCCAGTGAACTTAAGGGTTAGTCTATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAAGAAAATGACAATAGCCCAGTGAACTTAAGGGTTAGTCTATGG  450

seq1  TTTCATGCCTAGGCAATTCAGAAGTCTTAGTTAAATTATTTCTTTCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCCTAGGCAATTCAGAAGTCTTAGTTAAATTATTTCTTTCCCTT  500

seq1  TTCTCTCCCTCTTTTCCTCTCTCCCTCTTTTCAATTCTTCCTCTCTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCCTCTTTTCCTCTCTCCCTCTTTTCAATTCTTCCTCTCTCCCT  550

seq1  CATTCTTCTTTCCTTCCTCCTTTTGTTTTTATACTTTAGGTTTTGTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTTTCCTTCCTCCTTTTGTTTTTATACTTTAGGTTTTGTCTTT  600

seq1  GTCTGTCTCTTTGCCTCTGTCTGTCTCTCTTTTTCTCTGTTTCTCTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTCTTTGCCTCTGTCTGTCTCTCTTTTTCTCTGTTTCTCTCTCT  650

seq1  CTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTAATGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTAATGCATG  700

seq1  ATCTCATGTCATGTCACAAATATGCAGGTCAGAGGACAACATGCAGGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGTCATGTCACAAATATGCAGGTCAGAGGACAACATGCAGGAGT  750

seq1  CACTTCTG-TTCTT-CCATCATGTGACTCCCTGGGATAGAACTCAGGTTA  798
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTTTCTTCCCATCATGTGACTCCCTGGGATAGAACTCAGGTTA  800

seq1  TC-AGCCTTGGA-GACATACACATTTA-TCTGCTGAGCC-TTTTCACTGA  844
      || ||||||||| |||||||||||||| ||||||||||| ||||||||||
seq2  TCAAGCCTTGGAGGACATACACATTTATTCTGCTGAGCCTTTTTCACTGA  850

seq1  CCCCTAACTCAATTTCCCGTCGGCCTCT-AAAACTCCA--TTTCCTACT-  890
      |||||||||||||||||||||||||||| |||||||||  ||||||||| 
seq2  CCCCTAACTCAATTTCCCGTCGGCCTCTAAAAACTCCAATTTTCCTACTG  900

seq1  GTCCTACGTTCATTCTCAGTGTGA-CTAGAATGA-TGAAAAGGTGCACAG  938
      |||||||| ||||||||||||||| ||||||||| |||||||||||||||
seq2  GTCCTACGGTCATTCTCAGTGTGATCTAGAATGATTGAAAAGGTGCACAG  950

seq1  ATATTG-TCATTCACACTC-AAAGCAGTCTTCATTGG-TCCCATTTCAGT  985
      |||||| |||||||||||| |||||| |||||||||| ||| ||||||||
seq2  ATATTGATCATTCACACTCAAAAGCAATCTTCATTGGTTCCAATTTCAGT  1000

seq1  GTTCCATGCTCTATCGCCAACATTC  1010
      ||| |||||||||||||| ||||||
seq2  GTTTCATGCTCTATCGCCGACATTC  1025


seq1: chr17_76542631_76543719
seq2: B6Ng01-218N19.g_63_1153 (reverse)

seq1  TTTTTG--CACTCCCT-AGTGGGGTTGAAGGCACATGCAGCTGTGCTCAT  47
      ||||||  |||||||| |||||| | |||| |||||||||||||||||||
seq2  TTTTTGGCCACTCCCTAAGTGGGATGGAAGACACATGCAGCTGTGCTCAT  50

seq1  TT-CCATACTTAATTTGCA-TATCACTTTCAAGCCTGTGCCCAGGTTTTA  95
      || |||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  TTCCCATAC-TAATTTGCATTATCACTTTCAAGCCTGTGCCCAGGTTTTA  99

seq1  AGTTGGTGCTAAGTTGTGAATTCAAGTCCTCTTCTTTGCACATCTGTTTG  145
      || |||||||||||||||||||||||||  || |||||||||||||||||
seq2  AG-TGGTGCTAAGTTGTGAATTCAAGTCTCCTCCTTTGCACATCTGTTTG  148

seq1  ATCCAATGAGCTGTGTCTTTAGTACCATTATGGGATATTGGGTTGATATA  195
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCCAATGAGCTGTGTCTTTAGTACCATTATGGGATA-TGGGTTGATATA  197

seq1  TCTATGTTCAACCTTTTGAACATGTGTTTTATCCTACATTAATTTATTAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTCAACCTTTTGAACATGTGTTTTATCCTACATTAATTTATTAT  247

seq1  TTACAAAACCAAACTAATAACATTTTAACGGATTATTGTATGGATTCATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAACCAAACTAATAACATTTTAACGGATTATTGTATGGATTCATA  297

seq1  GAACTAATAATATTTGGCATATTAAGAACTCTAAATACATATTAACTCTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAATAATATTTGGCATATTAAGAACTCTAAATACATATTAACTCTT  347

seq1  TCCAATTTATTCTGTACTATCAAGTGAAAGTTTTCCATTCTACAAATGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTTATTCTGTACTATCAAGTGAAAGTTTTCCATTCTACAAATGGT  397

seq1  ACGGTTTCTCTATTTTTACATTTGTGAGTCTTTGTTTTGTACTCTAAATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTTCTCTATTTTTACATTTGTGAGTCTTTGTTTTGTACTCTAAATG  447

seq1  GGATTTAGTCCACTGTGTCAACATAAGTCCACTTGTGTAGCAACAAATTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAGTCCACTGTGTCAACATAAGTCCACTTGTGTAGCAACAAATTC  497

seq1  CTTATCCAGGTTATGGAGTTCCAGACATTCCTGAAGGATTTTGTGTCTAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCAGGTTATGGAGTTCCAGACATTCCTGAAGGATTTTGTGTCTAC  547

seq1  CATTATTTTACAGATAATAGTTTGCTATGCTTTTCTAGTTAACCATGGTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTACAGATAATAGTTTGCTATGCTTTTCTAGTTAACCATGGTA  597

seq1  CAGGCCTGGCTGTGATATTTCTATGACATGGCACATGAGAGGGAATGGCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTGGCTGTGATATTTCTATGACATGGCACATGAGAGGGAATGGCT  647

seq1  TCTTACCTCTTCTTCCAGTACTTTTTTGGACAGTCTCTTTCCCATTGCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTCTTCTTCCAGTACTTTTTTGGACAGTCTCTTTCCCATTGCTT  697

seq1  TTTACATAAATTTGTTCAAGCGATCTGCTTGTGTTTCTTTCTTTTCACTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATAAATTTGTTCAAGCGATCTGCTTGTGTTTCTTTCTTTTCACTT  747

seq1  TTTGTCTGCAGCCTTTTAGTTTTCTCTATTTTTAAGAGCTTCACTGAACG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGCAGCCTTTTAGTTTTCTCTATTTTTAAGAGCTTCACTGAACG  797

seq1  AATGAAAGAAAAGAAGAAAAGAAAGGAAGAAAGAAAGAAAAGAAAGAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGAAAAGAAGAAAAGAAAGGAAGAAAGAAAGAAAAGAAAGAAAA  847

seq1  GAAAAGAAAAGAAAAGAAAGGAAGAAAGGAAGAAAGAAAGAAAGAAAGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAGAAAAGAAAGGAAGAAAGGAAGAAAGAAAGAAAGAAAGAA  897

seq1  AGAAAAACAAACTTTTCTTTTTTCGATACTGAAACTTTTTGAACTCTTAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAAACTTTTCTTTTTTCGATACTGAAACTTTTTGAACTCTTAG  947

seq1  TCAATAAAGCAATGAATAGCCTCAACGTTAAGAAGCCCATAGCAAGAATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAAGCAATGAATAGCCTCAACGTTAAGAAGCCCATAGCAAGAATA  997

seq1  ACCAATCACGGTGGAGATAGATTCCCTTCAGTTTCTACTCCATATATCTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCACGGTGGAGATAGATTCCCTTCAGTTTCTACTCCATATATCTC  1047

seq1  TTCCACAATTTGCCTGTGTACTAGACCCTGCACTTTAGGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAATTTGCCTGTGTACTAGACCCTGCACTTTAGGAATTC  1091


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