BAC Information

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BAC

Clone NameB6Ng01-219A13
Chromosome17 (Build37)
Map Location 59,837,239 - 59,838,432
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219A13.bB6Ng01-219A13.g
ACCGA034995GA034996
length9371,176
definitionB6Ng01-219A13.b B6Ng01-219A13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctcaggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaatacattgaagaattgagttggaatttt
gatggggattgcattgaatctgtacattgcttttggccagatagccattt
ttacagtattgatcctgccaatccatgagcatgggagatctttcatcctc
tgagatcttcttaatttctttcttcagagacttgagtttatatcatacag
atctttcacttccttagttagagtcacgccgagatat

gaattccatttgtgaatggtctttggtgatgtttaaggtttaagttcttc
aatttctaaggaaaactaaagtccgaaaacatttgaacacaggaaaattc
attccagttgaaggcaaaagaacggctttttatttgctttgtaattagag
cataaagtgtgtaatggattcatatgccaattagttttacttagacagca
catatagtggtacccagaatttatttcagaaatacttagttcttacattt
aagcatgcatgataaatagatttagattcattcttgcagccctacagttc
tctttttacaaacaagtgatgatttcaatttcttatactgtaacctatca
tttcgaagatacattttagaagtgaaatggatggcaacaatactaaattg
agatatctaatattattagttttattggctttattcatctttgtacacca
ctaaaataaagagcctcatttttatttttcccttttttttccaggactct
gcacctccagtggcaattcagaaaattgcgagcaaatcattaaattgcaa
taaattattagatacaatcctcttttatgacattttccctagtctttaaa
aagaaatgtgcatttgaaacctttgctgctatatgtaattatattactca
gaatggattattgaacaccaattatcttaaacatgaaagatagtatttca
aaaaattggtggtataatggatgatatttttttataaggctccttttatg
gatgctttgttttgctataccttctattttgttagtatgaaaagcatata
tgtataaccatattaagagtgcatatttattaataagaagcatgtaatca
atataagccaacctagcaatcaatgttacatgggccctcatgccacactt
tgagaaacaagcacagactgggtttaaattgctacccatttttcaacatc
catgggaagagataaatacagtgatacacagtacttgtgaaaactttcag
aaagggaagcttcagcatcgttgcaaaatgagaaatttggggaggttgca
ctttcatcatcaacaaaagcttgttttttactgacaaagagaatgaaact
tttcattatttagctcttctggaaggtgtaagggtcctgtcatgaagacg
taggaagactgttcatagatcctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59837239_59838432
seq2: B6Ng01-219A13.g_60_1235 (reverse)

seq1  CAAAGGATCTATGAACAGCTCTTCCTTTACGTCTTTCATGACAGGACCTT  50
      |||||||||||||||||| ||||||  |||||| |||||||||||||| |
seq2  CAAAGGATCTATGAACAG-TCTTCC--TACGTC-TTCATGACAGGACCCT  46

seq1  TACAACCTTTCCACGAAGAGCTAAATAAATGAAAAGTTTTTCATTTCTTC  100
      ||||  | ||||| |||||||||||| |||||||||  |||||||   ||
seq2  TACA--CCTTCCA-GAAGAGCTAAAT-AATGAAAAG--TTTCATT--CTC  88

seq1  TTTGGTCAGAAAAAAAAAAAAAAAAAGCTTTTGTTGATGATGAAAAGTGC  150
      ||| |||||        |||||| |||||||||||||||||| |||||||
seq2  TTT-GTCAG-------TAAAAAACAAGCTTTTGTTGATGATG-AAAGTGC  129

seq1  AACCT-CCCAAATTTCTCATTTTTCCACGATGCTGAAGCTTCCCTTTCTG  199
      ||||| ||||||||||||||||| | ||||||||||||||||||||||||
seq2  AACCTCCCCAAATTTCTCATTTTGCAACGATGCTGAAGCTTCCCTTTCTG  179

seq1  AAGGTTTTCACAAGTACTGTGTATCACTGTATTTATCTCTT-CCATGGAT  248
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAGTTTTCACAAGTACTGTGTATCACTGTATTTATCTCTTCCCATGGAT  229

seq1  GTTGAAAAATGGGTAGCAATTTAAACCCAGTCTGTGCTTGTTTCTCAAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAAATGGGTAGCAATTTAAACCCAGTCTGTGCTTGTTTCTCAAAG  279

seq1  TGTGGCATGAGGG-CCATGTAACATTGATTGCTAGGTTGGCTTATATTGA  347
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTGGCATGAGGGCCCATGTAACATTGATTGCTAGGTTGGCTTATATTGA  329

seq1  TTACATGCTTCTTATTAATAAATATGCACTCTTAATATGGTTATACATAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGCTTCTTATTAATAAATATGCACTCTTAATATGGTTATACATAT  379

seq1  ATGCTTTTCATACTAACAAAATAGAAGGTATAGCAAAACAAAGCATCCAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTCATACTAACAAAATAGAAGGTATAGCAAAACAAAGCATCCAT  429

seq1  AAAAGGAGCCTTATAAAAAAATATCATCCATTATACCACCAATTTTTTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGCCTTATAAAAAAATATCATCCATTATACCACCAATTTTTTGA  479

seq1  AATACTATCTTTCATGTTTAAGATAATTGGTGTTCAATAATCCATTCTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTATCTTTCATGTTTAAGATAATTGGTGTTCAATAATCCATTCTGA  529

seq1  GTAATATAATTACATATAGCAGCAAAGGTTTCAAATGCACATTTCTTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATAATTACATATAGCAGCAAAGGTTTCAAATGCACATTTCTTTTT  579

seq1  AAAGACTAGGGAAAATGTCATAAAAGAGGATTGTATCTAATAATTTATTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTAGGGAAAATGTCATAAAAGAGGATTGTATCTAATAATTTATTG  629

seq1  CAATTTAATGATTTGCTCGCAATTTTCTGAATTGCCACTGGAGGTGCAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAATGATTTGCTCGCAATTTTCTGAATTGCCACTGGAGGTGCAGA  679

seq1  GTCCTGGAAAAAAAAGGGAAAAATAAAAATGAGGCTCTTTATTTTAGTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAAAAAAAAGGGAAAAATAAAAATGAGGCTCTTTATTTTAGTGG  729

seq1  TGTACAAAGATGAATAAAGCCAATAAAACTAATAATATTAGATATCTCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAAGATGAATAAAGCCAATAAAACTAATAATATTAGATATCTCAA  779

seq1  TTTAGTATTGTTGCCATCCATTTCACTTCTAAAATGTATCTTCGAAATGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATTGTTGCCATCCATTTCACTTCTAAAATGTATCTTCGAAATGA  829

seq1  TAGGTTACAGTATAAGAAATTGAAATCATCACTTGTTTGTAAAAAGAGAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTACAGTATAAGAAATTGAAATCATCACTTGTTTGTAAAAAGAGAA  879

seq1  CTGTAGGGCTGCAAGAATGAATCTAAATCTATTTATCATGCATGCTTAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGGCTGCAAGAATGAATCTAAATCTATTTATCATGCATGCTTAAA  929

seq1  TGTAAGAACTAAGTATTTCTGAAATAAATTCTGGGTACCACTATATGTGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAACTAAGTATTTCTGAAATAAATTCTGGGTACCACTATATGTGC  979

seq1  TGTCTAAGTAAAACTAATTGGCATATGAATCCATTACACACTTTATGCTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAGTAAAACTAATTGGCATATGAATCCATTACACACTTTATGCTC  1029

seq1  TAATTACAAAGCAAATAAAAAGCCGTTCTTTTGCCTTCAACTGGAATGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACAAAGCAAATAAAAAGCCGTTCTTTTGCCTTCAACTGGAATGAA  1079

seq1  TTTTCCTGTGTTCAAATGTTTTCGGACTTTAGTTTTCCTTAGAAATTGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTGTTCAAATGTTTTCGGACTTTAGTTTTCCTTAGAAATTGAA  1129

seq1  GAACTTAAACCTTAAACATCACCAAAGACCATTCACAAATGGAATTC  1194
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAAACCTTAAACATCACCAAAGACCATTCACAAATGGAATTC  1176


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