BAC Information

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BAC

Clone NameB6Ng01-221A14
Chromosome17 (Build37)
Map Location 78,373,441 - 78,374,054
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545234, LOC100043887
Downstream geneLOC668795, LOC383275, Crim1, Fez2, LOC100043888, Hdac1-ps, Vit, Strn, Heatr5b, 2310002B06Rik, EG625054, Eif2ak2, 2410078J06Rik, Cebpz, 2410091C18Rik, Prkcn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221A14.bB6Ng01-221A14.g
ACCGA036441GA036442
length977614
definitionB6Ng01-221A14.b B6Ng01-221A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggctatttgatt
ttctggagtctaccttcttgagttctttatattatctttatattggatat
tagtcccctatctgatttgggataggtaaagatactttcccaatctgttg
gtggtctttttgttttattgacggtgtcttttgccttgcagaagctttgc
aattttatgaggtctcatttatcgattctcaatcttacagcacaagccat
tgctgttctattcaggaatatcccgcctgtacctatatcttcgaggcttt
tccctactttctcctctataagtttcagtgtctctggttttatgtggagt
tctttaatccacttagatttgaccttagtacaaggagatagaaatggatc
aattcgcaatcttctacacgataacagccggttgtgccagcaccatttgt
tgaaaatgctgtcttttttccactggatggttttagctcccttgtcaaag
atcaagtgaccataggtgtgtgggttcatctctaggtcttcaattctgtt
ccattggtctacttgtctgtcactataccagtaccatgcagttttttttt
tatcacaattgctctttagtacagctttaggtcaggcatggtgattccac
cagaggttcttttatccttaagaagagtttttgctatcctaggttttttg
ttattccagatgaatctgcctattgccctttctaattcgttgaagaattg
agttggaattttgatggggattgcgttgaatctgtagattgcttttggca
agatagccatttttattataatgatcctgccaatccatgagcatgggagg
ttttccatcttctgagatcttttttaatttctttgtcatagacatgaagt
tcttatcatacagatcttcactttcttagagtcacgcccaggtatttata
ctattgtgactatgagaagggtgtttg
gaattctctcttcctggtctgctttacatcaggttcttcatgggattttg
agacacagacaggaaacctctgagcactttgcccttgactgagaaaacat
tcattcctgtccctgtgaccttggctctttctgggttttcactggtactc
ttgctacatacggtcatatctctgctagatgggacagactcaggatgaga
ggaaataaactttgcagagatgtctatttttatcatttttgtagatctgg
agttcctgaattaaaattagaaaaaaaaatctccttatagaatttcttaa
acatttttcttggtctagaatgcattattttttttatcactaccttatct
tgtcatctagaaatttctgaaatctcactttacaggtccaattcaaagaa
ccttcagcttggaacctaagcattccatttctatgtcaaaaaggggaggg
ggagggtcctctttttctctagatacattcctagtgattgccaagtgatt
tcttctgaagagtaatgaacttgggtctcattgtgaacttctgattaaac
ttatgtggcagggaataagaacattactccctgaggatctggtgagggtg
tggtggtgatgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_78373441_78374054
seq2: B6Ng01-221A14.g_67_680

seq1  GAATTCTCTCTTCCTGGTCTGCTTTACATCAGGTTCTTCATGGGATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTCCTGGTCTGCTTTACATCAGGTTCTTCATGGGATTTTG  50

seq1  AGACACAGACAGGAAACCTCTGAGCACTTTGCCCTTGACTGAGAAAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGACAGGAAACCTCTGAGCACTTTGCCCTTGACTGAGAAAACAT  100

seq1  TCATTCCTGTCCCTGTGACCTTGGCTCTTTCTGGGTTTTCACTGGTACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGTCCCTGTGACCTTGGCTCTTTCTGGGTTTTCACTGGTACTC  150

seq1  TTGCTACATACGGTCATATCTCTGCTAGATGGGACAGACTCAGGATGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACATACGGTCATATCTCTGCTAGATGGGACAGACTCAGGATGAGA  200

seq1  GGAAATAAACTTTGCAGAGATGTCTATTTTTATCATTTTTGTAGATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAAACTTTGCAGAGATGTCTATTTTTATCATTTTTGTAGATCTGG  250

seq1  AGTTCCTGAATTAAAATTAGAAAAAAAAATCTCCTTATAGAATTTCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTGAATTAAAATTAGAAAAAAAAATCTCCTTATAGAATTTCTTAA  300

seq1  ACATTTTTCTTGGTCTAGAATGCATTATTTTTTTTATCACTACCTTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTCTTGGTCTAGAATGCATTATTTTTTTTATCACTACCTTATCT  350

seq1  TGTCATCTAGAAATTTCTGAAATCTCACTTTACAGGTCCAATTCAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTAGAAATTTCTGAAATCTCACTTTACAGGTCCAATTCAAAGAA  400

seq1  CCTTCAGCTTGGAACCTAAGCATTCCATTTCTATGTCAAAAAGGGGAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCTTGGAACCTAAGCATTCCATTTCTATGTCAAAAAGGGGAGGG  450

seq1  GGAGGGTCCTCTTTTTCTCTAGATACATTCCTAGTGATTGCCAAGTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTCCTCTTTTTCTCTAGATACATTCCTAGTGATTGCCAAGTGATT  500

seq1  TCTTCTGAAGAGTAATGAACTTGGGTCTCATTGTGAACTTCTGATTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGAAGAGTAATGAACTTGGGTCTCATTGTGAACTTCTGATTAAAC  550

seq1  TTATGTGGCAGGGAATAAGAACATTACTCCCTGAGGATCTGGTGAGGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGGCAGGGAATAAGAACATTACTCCCTGAGGATCTGGTGAGGGTG  600

seq1  TGGTGGTGATGAAG  614
      ||||||||||||||
seq2  TGGTGGTGATGAAG  614