BAC Information

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BAC

Clone NameB6Ng01-222F11
Chromosome17 (Build37)
Map Location 91,386,680 - 91,387,883
singlet/doubletsinglet
Overlap geneNrxn1
Upstream genenone
Downstream geneEG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222F11.bB6Ng01-222F11.g
ACCGA037388GA037389
length1,180978
definitionB6Ng01-222F11.b B6Ng01-222F11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatttggcctttttaaacagcttaatacttccaatttttggcat
ataggagttaaggaaattagaaaaatctggcagaaatcacagagacacca
tgtgacatggtagagctggatttcatggaggtcatataactgttgtctca
ttaacagaatgttttaaaataaaatgttgttatttttctctgtggcagaa
agtgacattaaaaatttgaaaaccaacctatcaaagggctcatccctgga
aaaaaataaattttgccttttccagttactatcagttgcctgatctcttt
tcttttaagtgtgaagactatgagaactaaatattataatatcttgacca
catttttctttagtgactctctggtaaagataacagaaatgatgtcttac
tgatccattggttagtagacaaatagctttaggatgaaattcaaagacaa
ttacacgtttacagaaggagacaaacacattctgtagaacctcttgctag
tttcttatggttacttaaaaaagatgtcatcccttttctcttttactttg
tctaaataaatctcacgaagttgaaagatgctccttctagctcaaggtgg
cattctgtatatactgatgtcataaaaatggcaaacttacagtaaggcaa
aaatgtcctggaaatgtaatggtcaacaaaacacatgacgtgcctgccag
catggagcttaccgctttcataggtaaaggagacatgagaaagatcagaa
tacacaagtgcataattatagctacatgctgtgaaggaaaacacaaacct
atcttaagggcatagacatgtaactagtattagtaatcttctcttcagct
actcaccagcaatcacagctggatttgcgtgtgtactttattcctgttat
tctttatttaaagtcattctttcagaaaaatagtagagcaaactccaaat
aaataaattaaaaataaacattgttgaagtattctgaacagtttcacaga
cacacatatgcacatgcacctgtgcacttgtgcacacgtgacctcacacc
acacacacacactactacatcactctcacatacgaatagagggaggcagc
cactaatttctagaaagtgttaattagattctagcaaactgataaataaa
catgttagtatgctaactatgccatggata
gaattcactttgtagaccaggctggcctcaaactcagaaatccgcctgcc
tctgcctcccaagtgctgggattaaaggcatgcgccactaccgcccctct
gtatgtactccactttttaatagggtatttggttctctggagtcttccat
cttgagttctttgtatattttggatattagccctctactgcatgtagggt
tggtaaatatcttttctcaacctgggggttgttttgtcctattaatagtg
ccccttgatttacagaagcgtatcaattttataaggtcccatttgtcgat
tgttgcataagccattggtgttctgctcagtaagttttcccttgtgctca
agttcttgaggctcttccccactttctcttctgttagattcagtgtatct
ggttttatgtggaggtttttgatccacttggacttgagctttgtgcaagg
agatagatatggatgaatttgcattcttctacgtgcagttaagccagtgc
caactggcttgaaaattgttgaaaatgctgtcttttatccactgaatgat
tttagtttctttttcaaagatcaagtgactataggtgtgtgggttcattt
ctgggtcttcaattctagtccattgatctacttgcctgtttctgtaccaa
taccatgcagtttctctatagtacagcttgaggtcagggatggtgatttc
ccccagacgtttttttattgttaagaataggtttcactatcctaggtttt
ttgttactccaaatgaatttgagaattgctctttctaagtctatgaagaa
ttgagttgaaattttgatgggggattgcattgaatctgtagattactttc
ggaatgatggtcactttttactatattaatcctaccaatccatgagcata
agaaatctttccatcttctgagatcttcttcgatttctttcttcagagac
ttgaagttcttgccaaagaagatcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91386680_91387883
seq2: B6Ng01-222F11.b_48_1227

seq1  GAATTCAATTTGGCCTTTTTAAACAGCTTAATACTTCCAATTTTTGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTGGCCTTTTTAAACAGCTTAATACTTCCAATTTTTGGCAT  50

seq1  ATAGGAGTTAAGGAAATTAGAAAAATCTGGCAGAAATCACAGAGACACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGTTAAGGAAATTAGAAAAATCTGGCAGAAATCACAGAGACACCA  100

seq1  TGTGACATGGTAGAGCTGGATTTCATGGAGGTCATATAACTGTTGTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATGGTAGAGCTGGATTTCATGGAGGTCATATAACTGTTGTCTCA  150

seq1  TTAACAGAATGTTTTAAAATAAAATGTTGTTATTTTTCTCTGTGGCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGAATGTTTTAAAATAAAATGTTGTTATTTTTCTCTGTGGCAGAA  200

seq1  AGTGACATTAAAAATTTGAAAACCAACCTATCAAAGGGCTCATCCCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATTAAAAATTTGAAAACCAACCTATCAAAGGGCTCATCCCTGGA  250

seq1  AAAAAATAAATTTTGCCTTTTCCAGTTACTATCAGTTGCCTGATCTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAATTTTGCCTTTTCCAGTTACTATCAGTTGCCTGATCTCTTT  300

seq1  TCTTTTAAGTGTGAAGACTATGAGAACTAAATATTATAATATCTTGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAGTGTGAAGACTATGAGAACTAAATATTATAATATCTTGACCA  350

seq1  CATTTTTCTTTAGTGACTCTCTGGTAAAGATAACAGAAATGATGTCTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTTTAGTGACTCTCTGGTAAAGATAACAGAAATGATGTCTTAC  400

seq1  TGATCCATTGGTTAGTAGACAAATAGCTTTAGGATGAAATTCAAAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCATTGGTTAGTAGACAAATAGCTTTAGGATGAAATTCAAAGACAA  450

seq1  TTACACGTTTACAGAAGGAGACAAACACATTCTGTAGAACCTCTTGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACGTTTACAGAAGGAGACAAACACATTCTGTAGAACCTCTTGCTAG  500

seq1  TTTCTTATGGTTACTTAAAAAAGATGTCATCCCTTTTCTCTTTTACTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATGGTTACTTAAAAAAGATGTCATCCCTTTTCTCTTTTACTTTG  550

seq1  TCTAAATAAATCTCACGAAGTTGAAAGATGCTCCTTCTAGCTCAAGGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATAAATCTCACGAAGTTGAAAGATGCTCCTTCTAGCTCAAGGTGG  600

seq1  CATTCTGTATATACTGATGTCATAAAAATGGCAAACTTACAGTAAGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTATATACTGATGTCATAAAAATGGCAAACTTACAGTAAGGCAA  650

seq1  AAATGTCCTGGAAATGTAATGGTCAACAAAACACATGACGTGCCTGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCTGGAAATGTAATGGTCAACAAAACACATGACGTGCCTGCCAG  700

seq1  CATGGAGCTTACCGCTTTCATAGGTAAAGGAGACATGAGAAAGATCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCTTACCGCTTTCATAGGTAAAGGAGACATGAGAAAGATCAGAA  750

seq1  TACACAAGTGCATAATTATAGCTACATGCTGTGAAGGAAAACACAAACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAGTGCATAATTATAGCTACATGCTGTGAAGGAAAACACAAACCT  800

seq1  ATCTTAAGGGCATAGACATGTAACTAGTATTAGTAATCTTCTCTTCAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAGGGCATAGACATGTAACTAGTATTAGTAATCTTCTCTTCAGCT  850

seq1  ACTCACCAGCAATCACAGCTGGATTTGCGTGTGTACTTTATTCCTGTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCAGCAATCACAGCTGGATTTGCGTGTGTACTTTATTCCTGTTAT  900

seq1  TCTTTATTTAAAGTCATTCTTTCAGAAAAATAGTAGAGCAAACTCCAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTAAAGTCATTCTTTCAGAAAAATAGTAGAGCAAACTCCAAAT  950

seq1  AAATAAATTAAAAAATAAACAATTGTTGAAGTATTCTGAACAGTTTCACA  1000
      ||||||||| |||||||||| |||||||||||||||||||||||||||| 
seq2  AAATAAATT-AAAAATAAAC-ATTGTTGAAGTATTCTGAACAGTTTCAC-  997

seq1  AGACACACATATGCACATGCAACCTGTGCACTTGTGCACACGTGAACACA  1050
      |||||||||||||||||||| |||||||||||||||||||||||| | ||
seq2  AGACACACATATGCACATGC-ACCTGTGCACTTGTGCACACGTGACCTCA  1046

seq1  CACACACACACACACACACACACACACACACACACACATACAGAAATAGA  1100
      |||   |||||||||||||    |||  ||| | |||||||   ||||||
seq2  CAC---CACACACACACACTACTACA-TCACTCTCACATAC--GAATAGA  1090

seq1  GGGAGGGAAGCACTAAATTTCTAGGAAAGTTGGTAAATTAAGATTCTAAG  1150
      |||||| |  |||| |||||||| ||||||  || |||| ||||||| ||
seq2  GGGAGGCAGCCACT-AATTTCTA-GAAAGT--GTTAATT-AGATTCT-AG  1134

seq1  CAAAAACTGGATAAATAAACATGTTTAGTGATGCTAAACATAATGCCATT  1200
      |  ||||| |||||||||||||| ||||| ||||||   |  ||||||| 
seq2  C--AAACT-GATAAATAAACATG-TTAGT-ATGCTA---ACTATGCCATG  1176

seq1  GATA  1204
      ||||
seq2  GATA  1180