BAC Information

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BAC

Clone NameB6Ng01-224G14
Chromosome17 (Build37)
Map Location 39,829,430 - 39,830,550
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043297, LOC100043300, EG668200
Downstream geneLOC672857, LOC627695, LOC634967, Pgk2, Crisp3, Crisp1, LOC668229, LOC100043756, EG433107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224G14.bB6Ng01-224G14.g
ACCGA038880GA038881
length1,1491,120
definitionB6Ng01-224G14.b B6Ng01-224G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgattgttccaagtcttttatcatgaatggctgttggattttg
tcaaatgccttctttgcttctaactagatgatcatgtgttttttgtcttt
gagtttgtttatataatgaattatgtagatggatttccgtatattaaacc
ctccctgcatccatggaataaaacctactttgtcaggatggatgattgtt
ttaatgtgttcttggattcagatagcgagaattttattgagtatttttgc
atagatattcataagggaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagattaattgcggcttcatagaatgagttg
ggtagaatatcttctacttctattttgttgaatagtttgtgcagaactgg
aattagatcttctttgaaagtctgatagaactctgcaataaacccatctg
gtcctatgtttttttttttggttgggagactgttaatgactgtgtttatt
tctttaggggatattggactgtttagatcattaacttgatcctggtttaa
ctttggaacctggtgtgtgtctagaaatttgtccatttcgtccaggattt
ccatttttgttgagtatagccttttgtagaaggatcttatggtgttttgg
atttcttcaggatctgttgttatgtctagcttttcatttctgattttgtt
aattaggatgctgtctctgtgccctctagtgagtctggctaagggtttat
ctatcttgttgattttctcaaagaaccagctcttcctttggttgattctt
tgaataattcttcttgtttccacttggttgattttgcccctgagtttgtt
tatttccttctatctactcctcttgagtgaatttgctttcttattttcta
gagcttttaggtatgttgtcaacctgctagtgtatgctaatctataggtt
tctttttggagcactcacagctatgagtttccctctttgaaatgctttca
ttgtgtcccaatatgtttgggttatgttgtggctttattttcattaactc
taaaagtcttttaatttctttcttaatttttccttgaccaagtatcgttg
agagatgtgttcagttccacgtgactgttgcttccatttactatgttgt
gaattccaagggaggggatggatcataatcctgctggccacctcaggggt
tccaagctgctccagttacttatgaagttcctttacatgttgcactgggc
acagcagatcccctaacagaacttttagactttaagttctgttgacctgg
gtggggcagatctcctgggagtccttcagaacttgaatcaatttcataca
ccctacatttaactggtcatgattcttccaattgtttaactacatctttt
cccgattgtacctttctgcagtgagatgcaccctctccaaattcatttta
cgtttgttctactgtcccagattaaatactacataccttaacattttgca
ttaaacttgcttccttcatttttagtctaattttaacacaaataatgggt
aaatgtggcaccatacacaaggaaggaaacagcattcatcagaagtgatt
tttgttacttttctgtttctgggaaacatcattcaggataatttattcag
ggttcttccatttttctgaagatcatgcaacttaatttttctttatgttt
tatgaatatctaatggtgtatatagaacccatttttatgtcttattcagg
tgatggacacctatatattgcttctattttctgcctattatgaacaagaa
ataagcatggatatacaaatattaatacagaggaggaaagagaccttgac
atatttggccaaaggtgatgtcaatggatcacatggtattcctaatctga
tattttgacaactcaaggactgagcacaaaacttgctgtgtttgcagtct
acaaaccatgttttaagttctgtgtccatctaatatcctttgtggatagg
atctattgaaagtattgtgtgaattttttgttgtgttatggaatatcttg
atttctccatctacgttgattgagagtttgctgggtagagtagcctgggc
tgttctattatgtaatcttaagttctggatgacaatctgtacagaatctt
ctggcttttatagtctcttggtgagaagtatgctgtaatcctaataagtc
tgcttaatatgtacctgacctttcctcctcttagtacttttaaaattttt
gattgtttgttgttcaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39829430_39830550
seq2: B6Ng01-224G14.g_68_1187 (reverse)

seq1  GCATTGAACAAACAAACAAACAAAAATATTAAAAGTACTAAGAG--AGAA  48
      ||||||||| ||||||||| ||||||| ||||||||||||||||   |||
seq2  GCATTGAAC-AACAAACAATCAAAAATTTTAAAAGTACTAAGAGGAGGAA  49

seq1  AGGTCAGGTAACATATAAAGCAGACCTATTAGAATAACAGCATACTTCTC  98
      ||||||||| |||||| |||||||| |||||| || ||||||||||||||
seq2  AGGTCAGGT-ACATATTAAGCAGACTTATTAGGATTACAGCATACTTCTC  98

seq1  ACC-AGAGACTATAAAAGCCAGAAGATTCTGTACAGA-TGTCATCCAGAA  146
      ||| ||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCAAGAGACTATAAAAGCCAGAAGATTCTGTACAGATTGTCATCCAGAA  148

seq1  CTTAAGATTACATAATAG-ACAGCCCAGGCTACTCTACCCAGCAAAACTC  195
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  CTTAAGATTACATAATAGAACAGCCCAGGCTACTCTACCCAGC-AAACTC  197

seq1  TCAATCAACGTAGATGGAGAAATCAAGATATTCCATAACAACAACAAAAA  245
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  TCAATCAACGTAGATGGAGAAATCAAGATATTCCATAAC-ACAAC-AAAA  245

seq1  AATTCACACAATACTTTCAATAGATCCTATCCACAAAGGATATTAGATGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACACAATACTTTCAATAGATCCTATCCACAAAGGATATTAGATGG  295

seq1  ACACAGAACTTAAAACATGGTTTGTAGACTGCAAAACACAGCAAGTTTTG  345
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACACAGAACTTAAAACATGGTTTGTAGACTGC-AAACACAGCAAGTTTTG  344

seq1  TGCTCAGTCCTTGAGTTGTCAAAATATCAGATTAGGAATACCATGTGATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGTCCTTGAGTTGTCAAAATATCAGATTAGGAATACCATGTGATC  394

seq1  CATTGACATCACCTTTGGCCAAATATGTCAAGGTCTCTTTCCTCCTCTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGACATCACCTTTGGCCAAATATGTCAAGGTCTCTTTCCTCCTCTGT  444

seq1  ATTAATATTTGTATATCCATGCTTATTTCTTGTTCATAATAGGCAGAAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATTTGTATATCCATGCTTATTTCTTGTTCATAATAGGCAGAAAA  494

seq1  TAGAAGCAATATATAGGTGTCCATCACCTGAATAAGACATAAAAATGGGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCAATATATAGGTGTCCATCACCTGAATAAGACATAAAAATGGGT  544

seq1  TCTATATACACCATTAGATATTCATAAAACATAAAGAAAAATTAAGTTGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATACACCATTAGATATTCATAAAACATAAAGAAAAATTAAGTTGC  594

seq1  ATGATCTTCAGAAAAATGGAAGAACCCTGAATAAATTATCCTGAATGATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTCAGAAAAATGGAAGAACCCTGAATAAATTATCCTGAATGATG  644

seq1  TTTCCCAGAAACAGAAAAGTAACAAAAATCACTTCTGATGAATGCTGTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGAAACAGAAAAGTAACAAAAATCACTTCTGATGAATGCTGTTT  694

seq1  CCTTCCTTGTGTATGGTGCCACATTTACCCATTATTTGTGTTAAAATTAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTGTGTATGGTGCCACATTTACCCATTATTTGTGTTAAAATTAG  744

seq1  ACTAAAAATGAAGGAAGCAAGTTTAATGCAAAATGTTAAGGTATGTAGTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAATGAAGGAAGCAAGTTTAATGCAAAATGTTAAGGTATGTAGTA  794

seq1  TTTAATCTGGGACAGTAGAACAAACGTAAAATGAATTTGGAGAGGGTGCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTGGGACAGTAGAACAAACGTAAAATGAATTTGGAGAGGGTGCA  844

seq1  TCTCACTGCAGAAAGGTACAATCGGGAAAAGATGTAGTTAAACAATTGGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGCAGAAAGGTACAATCGGGAAAAGATGTAGTTAAACAATTGGA  894

seq1  AGAATCATGACCAGTTAAATGTAGGGTGTATGAAATTGATTCAAGTTCTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCATGACCAGTTAAATGTAGGGTGTATGAAATTGATTCAAGTTCTG  944

seq1  AAGGACTCCCAGGAGATCTGCCCCACCCAGGTCAACAGAACTTAAAGTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTCCCAGGAGATCTGCCCCACCCAGGTCAACAGAACTTAAAGTCT  994

seq1  AAAAGTTCTGTTAGGGGATCTGCTGTGCCCAGTGCAACATGTAAAGGAAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTGTTAGGGGATCTGCTGTGCCCAGTGCAACATGTAAAGGAAC  1044

seq1  TTCATAAGTAACTGGAGCAGCTTGGAACCCCTGAGGTGGCCAGCAGGATT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGTAACTGGAGCAGCTTGGAACCCCTGAGGTGGCCAGCAGGATT  1094

seq1  ATGATCCATCCCCTCCCTTGGAATTC  1121
      ||||||||||||||||||||||||||
seq2  ATGATCCATCCCCTCCCTTGGAATTC  1120