BAC Information

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BAC

Clone NameB6Ng01-229C18
Chromosome17 (Build37)
Map Location 91,844,240 - 91,845,377
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235
Downstream geneLOC100043741, LOC100043742, EG640442, LOC627395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229C18.bB6Ng01-229C18.g
ACCGA042394GA042395
length1,1921,145
definitionB6Ng01-229C18.b B6Ng01-229C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtattttgccttgcagaaactttggagtttcat
taggtcccatttgtcaatcctcgatcttacagcacaagccattgatgttc
tgttcaggaatttttcccccgtgcccatatcttcaaggcttttccccagt
ttctcttatataagtttcgttgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaagtagataagtatggaatgattcact
ctcttctacatgataacaaccagttgtgtcagtaccaattgttgaaaatg
ctgtctttcttccactggatggttttagcttccttgtcgaagatcaagtg
accataggtgtgtggattcatttctgggtcttcaattctattccattggt
ctacttgtctgtctcaataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctagttcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccaattt
tacaatgttgatcctgccaatccataagcatgggagatctttccatcttc
tgagatcttctttaatttctttcatcagagacttgaagtttttatcatac
agatctttcacttcctttagttagagtcacgccaagatatttttatatta
tttgtgactattgagaaggttgttgttccctaatttctttctcagcccgt
tatttcttgatagagaaggcatgacttgtttgagtttatttatatcagct
actttcacttaggctgttttatcagttaggagttctctggtgaacttttt
aggtccactattattactatccatttcactctgcaaaacggattggacta
ccttcagtgtaatccctggtatccttgtgtggtggccagatg

gaattcaacttgacagtcttagacaatgttcaaaatgcatgtgtgtgtgt
gtcattgtgtgtaacctcaggctgtagggatttgagttaacatataaagg
gtgttttgtttatagatttgattggcttggcacaaaattatagctattta
ctattgatgaatgtagtaacaacatagtcttgatgaataaacagttgttt
aaaagcaagtgtttgggtcttagtagaaactaaaatcttgtctttaccta
gtgaattaattattatagtttaataattgtttgcatagggctggaaagat
gctcagtcattaaagggtaggctcacaaccaaaaatataagaattgtttg
aataaatggaatttggtaaatttgtaaaaattaataagaaaattgtctgt
tatttggtatctgtctcattataaaaacattttttgaaatgaatcataga
caaatattaattcagagactatgttttttatcttaataatgttataagct
tacaatatctctattttctttactgaaattgcattatctctaaaaaccga
cacaacactgtgtagagatatatcagagactataataaggaacatagaac
tcagattatctaaagaaaactgagtttaattgaaaaatgaaaaaaatgaa
tgttacatgcatatggcataatgtagtcactgttacaccctaacactaat
ctccctagacattaaacctgagttaggtgtagccaacagttgaagcaggg
agaatgcttttactttgattttttactaaagtatgagaacatgagtgctg
tgatggatactattcttagcccactgagcccaaagaaagtgaggtggaag
acagagtaactttccaaggaacagcaatgggtgaagctttgcctacattt
ttgttacctttaattacttcttagatgtgaagggagaactgtgcatgcag
gaatagcatggccagaggttcccatcatgacttcagccttgtgaatatat
gcatggtaatcatttaggggtctggagcccggagtaaaccacatgctcac
atcattcttctatttacattttatctgagtgaggagatgttttagatctt
ttcattcaaaaaccatacaaatatacttgatgaggtaggaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91844240_91845377
seq2: B6Ng01-229C18.g_64_1208

seq1  GAATTCAACTTGACAGTCTTAGACAATGTTCAAAATGCATGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTGACAGTCTTAGACAATGTTCAAAATGCATGTGTGTGTGT  50

seq1  GTCATTGTGTGTAACCTCAGGCTGTAGGGATTTGAGTTAACATATAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTGTGTAACCTCAGGCTGTAGGGATTTGAGTTAACATATAAAGG  100

seq1  GTGTTTTGTTTATAGATTTGATTGGCTTGGCACAAAATTATAGCTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGTTTATAGATTTGATTGGCTTGGCACAAAATTATAGCTATTTA  150

seq1  CTATTGATGAATGTAGTAACAACATAGTCTTGATGAATAAACAGTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGATGAATGTAGTAACAACATAGTCTTGATGAATAAACAGTTGTTT  200

seq1  AAAAGCAAGTGTTTGGGTCTTAGTAGAAACTAAAATCTTGTCTTTACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAGTGTTTGGGTCTTAGTAGAAACTAAAATCTTGTCTTTACCTA  250

seq1  GTGAATTAATTATTATAGTTTAATAATTGTTTGCATAGGGCTGGAAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTAATTATTATAGTTTAATAATTGTTTGCATAGGGCTGGAAAGAT  300

seq1  GCTCAGTCATTAAAGGGTAGGCTCACAACCAAAAATATAAGAATTGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTCATTAAAGGGTAGGCTCACAACCAAAAATATAAGAATTGTTTG  350

seq1  AATAAATGGAATTTGGTAAATTTGTAAAAATTAATAAGAAAATTGTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGGAATTTGGTAAATTTGTAAAAATTAATAAGAAAATTGTCTGT  400

seq1  TATTTGGTATCTGTCTCATTATAAAAACATTTTTTGAAATGAATCATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGTATCTGTCTCATTATAAAAACATTTTTTGAAATGAATCATAGA  450

seq1  CAAATATTAATTCAGAGACTATGTTTTTTATCTTAATAATGTTATAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTAATTCAGAGACTATGTTTTTTATCTTAATAATGTTATAAGCT  500

seq1  TACAATATCTCTATTTTCTTTACTGAAATTGCATTATCTCTAAAAACCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATCTCTATTTTCTTTACTGAAATTGCATTATCTCTAAAAACCGA  550

seq1  CACAACACTGTGTAGAGATATATCAGAGACTATAATAAGGAACATAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACACTGTGTAGAGATATATCAGAGACTATAATAAGGAACATAGAAC  600

seq1  TCAGATTATCTAAAGAAAACTGAGTTTAATTGAAAAATGAAAAAAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTATCTAAAGAAAACTGAGTTTAATTGAAAAATGAAAAAAATGAA  650

seq1  TGTTACATGCATATGGCATAATGTAGTCACTGTTACACCCTAACACTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATGCATATGGCATAATGTAGTCACTGTTACACCCTAACACTAAT  700

seq1  CTCCCTAGACATTAAACCTGAGTTAGGTGTAGCCAACAGTTGAAGCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGACATTAAACCTGAGTTAGGTGTAGCCAACAGTTGAAGCAGGG  750

seq1  AGAATGCTTTTACTTTGATTTTTTACTAAAGTATGAGAACATGAGTGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCTTTTACTTTGATTTTTTACTAAAGTATGAGAACATGAGTGCTG  800

seq1  TGATGGATACTATTCTTAGCCCACTGAGCCCAAAGAAAGTGAGGTGGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGATACTATTCTTAGCCCACTGAGCCCAAAGAAAGTGAGGTGGAAG  850

seq1  ACAGAGTAAC-TTCCAAGGAACAGCAATGGGTGAAGC-TTGGCTACATTT  898
      |||||||||| |||||||||||||||||||||||||| ||| ||||||||
seq2  ACAGAGTAACTTTCCAAGGAACAGCAATGGGTGAAGCTTTGCCTACATTT  900

seq1  TTGTTACC-TTAATTACTTCTTAGATGTGAAGGGAGAACTGTGCATGCAG  947
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACCTTTAATTACTTCTTAGATGTGAAGGGAGAACTGTGCATGCAG  950

seq1  GAATAGCATGGCCAGAGGTTCCCATCATGACTTCAGCCTTGTGAATATAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCATGGCCAGAGGTTCCCATCATGACTTCAGCCTTGTGAATATAT  1000

seq1  GCATGGTAATCATTAAGGGGTCTGGAGCCCGGAGTAAA-CACATGCTCAC  1046
      |||||||||||||| ||||||||||||||||||||||| |||||||||| 
seq2  GCATGGTAATCATTTAGGGGTCTGGAGCCCGGAGTAAACCACATGCTCA-  1049

seq1  CATCA-TCTTCTATTTACATTTTATCTGAGGTGAAGAGATG-TTTAGATC  1094
      ||||| ||||||||||||||||||||||| |||| |||||| ||||||||
seq2  CATCATTCTTCTATTTACATTTTATCTGA-GTGAGGAGATGTTTTAGATC  1098

seq1  TTTTCA-TCAAAA--CATACCAATATACCTGATGAAGTAGAAAAGGA  1138
      |||||| ||||||  ||||| ||||||| |||||| |||| ||||||
seq2  TTTTCATTCAAAAACCATACAAATATACTTGATGAGGTAGGAAAGGA  1145


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