BAC Information

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BAC

Clone NameB6Ng01-231E10
Chromosome17 (Build37)
Map Location 39,107,602 - 39,108,719
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297, LOC100043300, EG668200, LOC672857, LOC627695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231E10.bB6Ng01-231E10.g
ACCGA043921GA043922
length1,2031,119
definitionB6Ng01-231E10.b B6Ng01-231E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaacaaactttcagaaacagccaataaaatactaagcaaactgt
tccaaagaataaaaataaatggaacactcaaaatagtttctatgaggtca
catttacttctttatttaaaccacacaactcaacaaagaataagaacttt
agatcaatttctgttttgatcattgatgaaaaaccctcagtaaataattg
taaactgactgcaggaccacatcaaagacaccagccatcaagagttaaca
agaatagttgaaaagaaaacaaaaacccttcaacataatccacacaaaaa
gaagctgatagaaaaaaagaatcatatgattgtctcactaggcttggaaa
atgtcttttaaacatatccaagccacatgcaggttccatgtattagagaa
atcattgtacatggcacgtacctatgcttgataaaaaacaatatacagca
agccattaggcaacataaaacaaaatagagagtatctttaagaagttaca
ctatcggctggggaggcggcctaagccacagcagcagcggtcgccatctt
ggtccgagacccgccgaacttaggaaattagtctgaacaggtgagagggt
gcgccagagaacctgacagcttctggaacaggcagaagcacagaggcgct
gaggcagcaccctgtgtgggccggggacagccggccaccttccagaccgg
aggacaggtgcccacccagctggggaggcggcctaagccacagcagcagc
ggtcgccatcttggtccgggacccgccgaacttaggaaattagtctgaac
aggtgagagggtgcgccagagaacctgacagcctctggaacaggcagaag
cacagaggggctgaggcagcaccctgtgtgggccggggacagccggccac
ctttccggaccggaggacaggtgcccgcccggctggggaggcgacctaag
ccacagcagcagcggtcgccatcttggttcccagacccgccgaacttagg
aaattagtctgaacagtggagagggtgcgccagaagaccctgacagcttc
tggaacagcagaagcacagagcgctgagctagcacccctgtgtggtcgga
cagcgcaacttcagaaccggagacgtgccactcgctgggagcgactagct
agcagcacggtcgccatcatgttccgggaactctccagaaacgtatagta
aat
gaattcatttaaatttctctccatttaaattgatattatctatgtaattg
ctgtaaactacacattgaaaataagactcacttctcaaattgagattgga
tgtatttattccgtatccattttttagacattcaaataaaattgagcagt
aagaatctagtgattttttaacccatagtgctgtgatacaacagcattta
tcagagtgttacattggccacatgaaatgtaggtagactgcaatgtggta
gcattattttcttcccatgctttatttttaacaaataaataaatcaccac
tgttcttgtctaactgagatcactgccttgttctctttctgggcctcagt
cactactgactttattgtaaacctttgttttcttttcattgtaaatatgg
tttcttccagtttctgatcagactgcttatgccatctgttcctattgaaa
tcttgccaagtttaaaacggagtatcacttcagaggtatccacactctct
gtgaaatggaaacctacattgatatcaagagtgtttgagcagggcagtgg
tggtgcacacctttatactagcacttgggaggcagaggcaggcacatatc
tgagttcaaggtctgcctagtataaagagtgacctaaatgccttagaaca
ctcaccagagtcctcaagaggaatggtaaaggtcattattgttatcaagg
ttactcgtggaaactacaaaagatacagaactatttggtacttaaaattt
aaagatgtgaaaaaggagatatttgcagatactaaaaattgatcatgata
gcctgagtattttaaatgtatgtactgaaatgctctggaaatagatcaat
attatggaaagttgtcttaattgagttgttaacgaggcatgcttgtataa
tgacccgaaagtctctcttttgatgtagttgctatgttgtaaaaacgatc
cataggaattctaggattcagcatgcattctgttcaggattgcccctttg
tatcctgaataatgctagtaaatatgttttattgttcccactgtggatat
ttgtgatcataaagaatatatttgagacccacctaatacagtctgggtca
catatccagagaatgctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39107602_39108719
seq2: B6Ng01-231E10.g_66_1184 (reverse)

seq1  AGAGCATCTTCTGGATATGTGACCAGGACTGTA-TAGTTGGGTCTCAAAT  49
      |||||||  |||||||||||||||  ||||||| ||| ||||||||||||
seq2  AGAGCATTCTCTGGATATGTGACCCAGACTGTATTAGGTGGGTCTCAAAT  50

seq1  ATATTCTTTATGATCACAAATATCCACAGTGGGAACAATAAAACATATTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTTATGATCACAAATATCCACAGTGGGAACAATAAAACATATTT  100

seq1  ACTAGCATTAATTCAGGATACAAAGGGGCAAT-CTGAACAGAATGCATGC  148
      ||||||||| |||||||||||||||||||||| |||||||||||||||||
seq2  ACTAGCATT-ATTCAGGATACAAAGGGGCAATCCTGAACAGAATGCATGC  149

seq1  TGAATCCTAGAATTCCTATGGATCGTTTTTACAACATAGCAACTACATCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTAGAATTCCTATGGATCGTTTTTACAACATAGCAACTACATCA  199

seq1  AAAGAGAGACTTTCGGGTCATTATACAAGCATGCCTCGTTAACAACTCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGACTTTCGGGTCATTATACAAGCATGCCTCGTTAACAACTCAA  249

seq1  TTAAGACAACTTTCCATAATATTGATCTATTTCCAGAGCATTTCAGTACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACAACTTTCCATAATATTGATCTATTTCCAGAGCATTTCAGTACA  299

seq1  TACATTTAAAATACTCAGGCTATCATGATCAATTTTTAGTATCTGCAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTAAAATACTCAGGCTATCATGATCAATTTTTAGTATCTGCAAAT  349

seq1  ATCTCCTTTTTCACATCTTTAAATTTTAAGTACCAAATAGTTCTGTATCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTTTTCACATCTTTAAATTTTAAGTACCAAATAGTTCTGTATCT  399

seq1  TTTGTAGTTTCCACGAGTAACCTTGATAACAATAATGACCTTTACCATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTTTCCACGAGTAACCTTGATAACAATAATGACCTTTACCATTC  449

seq1  CTCTTGAGGACTCTGGTGAGTGTTCTAAGGCATTTAGGTCACTCTTTATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGGACTCTGGTGAGTGTTCTAAGGCATTTAGGTCACTCTTTATA  499

seq1  CTAGGCAGACCTTGAACTCAGATATGTGCCTGCCTCTGCCTCCCAAGTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGACCTTGAACTCAGATATGTGCCTGCCTCTGCCTCCCAAGTGC  549

seq1  TAGTATAAAGGTGTGCACCACCACTGCCCTGCTCAAACACTCTTGATATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAAAGGTGTGCACCACCACTGCCCTGCTCAAACACTCTTGATATC  599

seq1  AATGTAGGTTTCCATTTCACAGAGAGTGTGGATACCTCTGAAGTGATACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGGTTTCCATTTCACAGAGAGTGTGGATACCTCTGAAGTGATACT  649

seq1  CCGTTTTAAACTTGGCAAGATTTCAATAGGAACAGATGGCATAAGCAGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTTAAACTTGGCAAGATTTCAATAGGAACAGATGGCATAAGCAGTC  699

seq1  TGATCAGAAACTGGAAGAAACCATATTTACAATGAAAAGAAAACAAAGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGAAACTGGAAGAAACCATATTTACAATGAAAAGAAAACAAAGGT  749

seq1  TTACAATAAAGTCAGTAGTGACTGAGGCCCAGAAAGAGAACAAGGCAGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAAAGTCAGTAGTGACTGAGGCCCAGAAAGAGAACAAGGCAGTG  799

seq1  ATCTCAGTTAGACAAGAACAGTGGTGATTTATTTATTTGTTAAAAATAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTTAGACAAGAACAGTGGTGATTTATTTATTTGTTAAAAATAAA  849

seq1  GCATGGGAAGAAAATAATGCTACCACATTGCAGTCTACCTACATTTCATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGAAGAAAATAATGCTACCACATTGCAGTCTACCTACATTTCATG  899

seq1  TGGCCAATGTAACACTCTGATAAATGCTGTTGTATCACAGCACTATGGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAATGTAACACTCTGATAAATGCTGTTGTATCACAGCACTATGGGT  949

seq1  TAAAAAATCACTAGATTCTTACTGCTCAATTTTATTTGAATGTCTAAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATCACTAGATTCTTACTGCTCAATTTTATTTGAATGTCTAAAAA  999

seq1  ATGGATACGGAATAAATACATCCAATCTCAATTTGAGAAGTGAGTCTTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATACGGAATAAATACATCCAATCTCAATTTGAGAAGTGAGTCTTAT  1049

seq1  TTTCAATGTGTAGTTTACAGCAATTACATAGATAATATCAATTTAAATGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATGTGTAGTTTACAGCAATTACATAGATAATATCAATTTAAATGG  1099

seq1  AGAGAAATTTAAATGAATTC  1118
      ||||||||||||||||||||
seq2  AGAGAAATTTAAATGAATTC  1119