BAC Information

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BAC

Clone NameB6Ng01-231G23
Chromosome17 (Build37)
Map Location 77,093,825 - 77,094,968
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043885, LOC100043886
Downstream geneEG624348, LOC545234, LOC100043887
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231G23.bB6Ng01-231G23.g
ACCGA044039GA044040
length1,1531,080
definitionB6Ng01-231G23.b B6Ng01-231G23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcatagatcagtgtgggttggaaaatgtaggcagaaagcttg
gttcttatgaaaaaatttcagtttgctgaaggatgacatttagaaatttt
gtattggttatatatttcttgaatttctcagcagacaggaagatttcata
aatacaaacttaattaagtctgaagactccgtggtggatttcagatgaga
ggtgggaagagtttgcactgctacgttctccaatgaaccagtttcgttaa
acaaatgtgaaagtcataataaatcactgctaaatttcaggctatatttt
aagaaagtgctgcatccaattaaaatactgattcctctacttcttcctaa
gaattaatcaacagaattttccttatatcttggaacttgaactttttata
aagttaatagctttttggtactaataaaaattatcactctctactgataa
aagtaactgttcatccattcaaagaactttgactgttttctctaatctac
cactgtgtcacagcaaaggtaaccaaagggtgaaatctgtgatgtaactg
aaaataaagactaatatcacatgtgcacctgtgtgcttatttatctttat
tttttaaattttttgctatcaacatttttggcatttttattagatatttt
cttcatttacacttcaaatgctatccccaaagccccctattccctccccc
tgccctgctccccaactcaccctctcccacttcttggccctggcattccc
ctgtactggggcatatgatcttcgcaataccaagggcctctcctaccatt
gattgcccactaggccatcttctgctacatatgcaactagagacacaact
cagggggggggtactggttggttcatattgttgttccttctataggattg
cagacccctttagctccttgtgtattttctctagcctcttcaataagggg
ctcggtgttccatccatagatgactgttgagcatccaacttcttgtattt
gtcaggcattggcatagccctcaccagagacagctattgttcaggtcttg
cataagttcttcagtaactgcctatattccttcaatttatggaattctaa
aaaatgcataatcataaccaagtgcttcttgcacaaaggatcattttctg
act

gaattctgctcagctggctaccttcacttccctcatgatctaagaattgc
atgaaaactctaaggggcttccagttcctcactggccctcacaatagtag
ggttagatctctttcaggcattgctgctggaacagattaatgattcaatc
accatcctagaaaagaacatagccatgtagattgtcagctttgaccacca
ctcttagaaatatttttggaaaaataaaattgtttatgagggtaggttaa
gatgttttcactattggctctgatgtagcaaatcttagggaatgatttga
agttcagaaagcacacttttttaaaaatttttttattaggtattttcttc
atttacatttccagtgctaccccaaaagtctccccataccctcttcccca
ctccccacccccccacactcccacttcttggcgctggtgttcccctgtac
tgaggtatataaagttgcaagaccaatgtgcctctctttccaatgatgag
ctaaggactttttatggtcagggaacaagaacaatggcagcactggctaa
tatgactctcactaaggctgtattggtgatggttgatatcctatacccat
ttttgccctcagctacttgatatgatttaataagaattgctcaggagtag
atatgcactatgtgaatttaaaatagacatgacttggttttatataaaag
tttagacttgtggttcttttaagatttttatgagattacttttaaagata
aataacaaaataattaatcctttctgtgtcaccacaaatttctaccttcc
ggtaagagaaactagagaaatctatcttgcttgcttacactttgttaatc
tacaagtagcttagtttataaatgtatgtgggttcttagaataatttgtt
tacctgtactaagtaacattatttcttataaggtattggggaacatattg
tgttttcatagtccttcaccagaaaaaatctaaaatatatttcatacatc
ctgagagatttgcttgaacttataaaaacatagaaaaaagaataagttgt
tggaaacattgatctttcgaatcctcctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77093825_77094968
seq2: B6Ng01-231G23.b_50_1202 (reverse)

seq1  AGTCAG-AAATGATCCTTTGTTGCAAG-AGCACTTTGTTATGA-TATGCA  47
      |||||| ||||||||||||| |||||| ||||||| ||||||| ||||||
seq2  AGTCAGAAAATGATCCTTTG-TGCAAGAAGCACTTGGTTATGATTATGCA  49

seq1  TTTTTTTAGAA-TCCATTAA-TGAAGGAATTAATA-GCAGTTACTGAGGA  94
       |||||||||| ||||| || |||||||||  ||| ||||||||||| ||
seq2  -TTTTTTAGAATTCCATAAATTGAAGGAAT--ATAGGCAGTTACTGAAGA  96

seq1  ACTTATGCAGACCCTGA--CATAGCTGTCTCTTGTGA-GGCTATGCCAAT  141
      |||||||||   |||||   |||||||||||| |||| ||||||||||||
seq2  ACTTATGCAAGACCTGAACAATAGCTGTCTCTGGTGAGGGCTATGCCAAT  146

seq1  GCCTGACAAATAC-AGAAG-TGGATGCTC-ACAGTCATCTATTGGATGGA  188
      ||||||||||||| ||||| ||||||||| ||||||||||| ||||||||
seq2  GCCTGACAAATACAAGAAGTTGGATGCTCAACAGTCATCTA-TGGATGGA  195

seq1  ACACCGAGCCCC-TAATGAAGAGGCTAGAG-AAATACACAAGGAGCTAAA  236
      |||||||||||| || |||||||||||||| |||||||||||||||||||
seq2  ACACCGAGCCCCTTATTGAAGAGGCTAGAGAAAATACACAAGGAGCTAAA  245

seq1  GGGGTCTGCAATCCTATAGAAGGAACAACAATATGAACCAACCAGTACCC  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGCAATCCTATAGAAGGAACAACAATATGAACCAACCAGTACCC  295

seq1  CCCCCCTGAGTTGTGTCTCTAGTTGCATATGTAGCAGAAGATGGCCTAGT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTGAGTTGTGTCTCTAGTTGCATATGTAGCAGAAGATGGCCTAGT  345

seq1  GGGCAATCAATGGTAGGAGAGGCCCTTGGTATTGCGAAGATCATATGCCC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATCAATGGTAGGAGAGGCCCTTGGTATTGCGAAGATCATATGCCC  395

seq1  CAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGAGGGTGAGTTGGGGA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGAGGGTGAGTTGGGGA  445

seq1  GCAGGGCAGGGGGAGGGAATAGGGGGCTTTGGGGATAGCATTTGAAGTGT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCAGGGGGAGGGAATAGGGGGCTTTGGGGATAGCATTTGAAGTGT  495

seq1  AAATGAAGAAAATATCTAATAAAAATGCCAAAAATGTTGATAGCAAAAAA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGAAAATATCTAATAAAAATGCCAAAAATGTTGATAGCAAAAAA  545

seq1  TTTAAAAAATAAAGATAAATAAGCACACAGGTGCACATGTGATATTAGTC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAATAAAGATAAATAAGCACACAGGTGCACATGTGATATTAGTC  595

seq1  TTTATTTTCAGTTACATCACAGATTTCACCCTTTGGTTACCTTTGCTGTG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCAGTTACATCACAGATTTCACCCTTTGGTTACCTTTGCTGTG  645

seq1  ACACAGTGGTAGATTAGAGAAAACAGTCAAAGTTCTTTGAATGGATGAAC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGGTAGATTAGAGAAAACAGTCAAAGTTCTTTGAATGGATGAAC  695

seq1  AGTTACTTTTATCAGTAGAGAGTGATAATTTTTATTAGTACCAAAAAGCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTTTATCAGTAGAGAGTGATAATTTTTATTAGTACCAAAAAGCT  745

seq1  ATTAACTTTATAAAAAGTTCAAGTTCCAAGATATAAGGAAAATTCTGTTG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTTATAAAAAGTTCAAGTTCCAAGATATAAGGAAAATTCTGTTG  795

seq1  ATTAATTCTTAGGAAGAAGTAGAGGAATCAGTATTTTAATTGGATGCAGC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCTTAGGAAGAAGTAGAGGAATCAGTATTTTAATTGGATGCAGC  845

seq1  ACTTTCTTAAAATATAGCCTGAAATTTAGCAGTGATTTATTATGACTTTC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTAAAATATAGCCTGAAATTTAGCAGTGATTTATTATGACTTTC  895

seq1  ACATTTGTTTAACGAAACTGGTTCATTGGAGAACGTAGCAGTGCAAACTC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTTTAACGAAACTGGTTCATTGGAGAACGTAGCAGTGCAAACTC  945

seq1  TTCCCACCTCTCATCTGAAATCCACCACGGAGTCTTCAGACTTAATTAAG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCTCTCATCTGAAATCCACCACGGAGTCTTCAGACTTAATTAAG  995

seq1  TTTGTATTTATGAAATCTTCCTGTCTGCTGAGAAATTCAAGAAATATATA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTATGAAATCTTCCTGTCTGCTGAGAAATTCAAGAAATATATA  1045

seq1  ACCAATACAAAATTTCTAAATGTCATCCTTCAGCAAACTGAAATTTTTTC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATACAAAATTTCTAAATGTCATCCTTCAGCAAACTGAAATTTTTTC  1095

seq1  ATAAGAACCAAGCTTTCTGCCTACATTTTCCAACCCACACTGATCTATGA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACCAAGCTTTCTGCCTACATTTTCCAACCCACACTGATCTATGA  1145

seq1  AAGAATTC  1144
      ||||||||
seq2  AAGAATTC  1153


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