BAC Information

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BAC

Clone NameB6Ng01-231H12
Chromosome17 (Build37)
Map Location 19,228,671 - 19,229,271
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665210, Vmn2r92, EG665227, EG627132, LOC100041612, Vmn2r95, Vmn2r-ps114, EG433070, Vmn2r-ps115, Vmn2r-ps117, LOC100042183, EG627367, EG224552
Downstream geneLOC665344, LOC627466, LOC627476, EG665371, EG665376, EG627537, EG627576, EG224572, EG627618, EG627636, LOC100042273, LOC210465, LOC670534, EG627664, V2r7, LOC100041856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231H12.bB6Ng01-231H12.g
ACCGA044063GA044064
length965960
definitionB6Ng01-231H12.b B6Ng01-231H12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaagcacaaaaggaattttagtctttagaatgatacttaccagg
agagtcagaatctgtgttcatctgacgaattaatctctctggcagctacc
gcgatccatcttcatctcgtgaaaaaacacaaactgagcccctaccccaa
attagaactggatctggacccttccattcattagtcagggggtccttcca
ttttaccaatgcataagaattagaagtaactggatgccagtggcgatccg
ctgcagactggcccttgatatcggtgtgcaagaaatttaggacaaataag
gtgaaggcaaggtgggcctttggtgaccttgggggatatagctgcccctc
ttttgttttaaaaagccaattctttaaggtgcgatgagcacgttcaacta
tttcttgtcccatggggttgtaaggaattctagttttatgtttaataccg
aattctttacagaatgaaataaagtttttactggaataagatggcccatt
gtctgttttaataagtttaggcaatcccatggcattaaatgcttgtaggc
aatgatcaattacgttttttgaagcttctcctgtatgcagagaagcaaaa
agaaatcctgaacaagtatcaatgcaaacatgtatatattttagttttcc
aaattctgcataatgggttatatccatttgccaaatatgattaggcataa
gacctctaggattaacttctagatgcggcactggagataaagtaatacat
ttaggacattgttttacaatcattctcgcttgctcctttgtgatcttatg
tcggagccttagggtatggctagagagatgaaacctttcatgatcacgtt
gggccaaagcaacccgatctgaaactaaggcttctcttatcagagctctg
tcaatgcgatcattaccctctgccagaggtctaggaagaccagagtgaga
ccgtatgtggccaat
gaattcctccctatatcagaggaggggggcaggtatggtcaatagagcaa
aggagataagatgtggggactgataagagaggaggaaggggaagctataa
taaggaccgaaatgttatataatttaaccaataaaatataatgccaaaaa
agaaagaataaccctataaaaagataccattgtttcaagtatgttttcca
attagttcttcaataaattaaaaggcatttgtaataaaaacaaagaattc
aaaagaaaagcacagttattcacttccttcaataagctggggagctattt
caatgatgatgacaatagcagatcatgccctaccctttactgactaaagg
actctgaaaagaagaacttctaccccacattattatcacagtagaaatta
tactactggtgtggataaagttgagcagcctgtaacatgtgattacatgt
cattggccctataatttatttactttgccttgttgtgggccatggaggtc
tgtaattagctgcttccttcccaccaactatgtcagacaagatagttggc
ctgagataatgagatcaagatgttcctgtctctgcctggctacaacattt
ggaagagcatggccaggatctattcttgtgaacccagtagagttggtcct
ggccctttatattgtgaaagagatagcccttaggacatgagagcaggagt
gttttatctgtcaatggctggttgaacattagatatggtagccaggatgt
acttggggagctcactctgtcaatatggctgtgactcaacaattacccat
tcacagattgatcttgaatcttgagttgatcctctcacacatttattttt
ttatctgctggagtacatgaaaggcccagatctgcagatccaaagctgca
ggatgtcaatgacaccagactagaatttgatattgcagagcagtcctagt
aagtattaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_19228671_19229271
seq2: B6Ng01-231H12.g_66_666 (reverse)

seq1  CAAATGTTGTAGCCAGGCAGAGACAGGAACATCTTGATCTCATTATCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTGTAGCCAGGCAGAGACAGGAACATCTTGATCTCATTATCTCA  50

seq1  GGCCAACTATCTTGTCTGACATAGTTGGTGGGAAGGAAGCAGCTAATTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACTATCTTGTCTGACATAGTTGGTGGGAAGGAAGCAGCTAATTAC  100

seq1  AGACCTCCATGGCCCACAACAAGGCAAAGTAAATAAATTATAGGGCCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCCATGGCCCACAACAAGGCAAAGTAAATAAATTATAGGGCCAAT  150

seq1  GACATGTAATCACATGTTACAGGCTGCTCAACTTTATCCACACCAGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTAATCACATGTTACAGGCTGCTCAACTTTATCCACACCAGTAGT  200

seq1  ATAATTTCTACTGTGATAATAATGTGGGGTAGAAGTTCTTCTTTTCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTACTGTGATAATAATGTGGGGTAGAAGTTCTTCTTTTCAGAG  250

seq1  TCCTTTAGTCAGTAAAGGGTAGGGCATGATCTGCTATTGTCATCATCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAGTCAGTAAAGGGTAGGGCATGATCTGCTATTGTCATCATCATT  300

seq1  GAAATAGCTCCCCAGCTTATTGAAGGAAGTGAATAACTGTGCTTTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCTCCCCAGCTTATTGAAGGAAGTGAATAACTGTGCTTTTCTTT  350

seq1  TGAATTCTTTGTTTTTATTACAAATGCCTTTTAATTTATTGAAGAACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTTTGTTTTTATTACAAATGCCTTTTAATTTATTGAAGAACTAA  400

seq1  TTGGAAAACATACTTGAAACAATGGTATCTTTTTATAGGGTTATTCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAACATACTTGAAACAATGGTATCTTTTTATAGGGTTATTCTTTC  450

seq1  TTTTTTGGCATTATATTTTATTGGTTAAATTATATAACATTTCGGTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGCATTATATTTTATTGGTTAAATTATATAACATTTCGGTCCTT  500

seq1  ATTATAGCTTCCCCTTCCTCCTCTCTTATCAGTCCCCACATCTTATCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGCTTCCCCTTCCTCCTCTCTTATCAGTCCCCACATCTTATCTCC  550

seq1  TTTGCTCTATTGACCATACCTGCCCCCCTCCTCTGATATAGGGAGGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTATTGACCATACCTGCCCCCCTCCTCTGATATAGGGAGGAATT  600

seq1  C  601
      |
seq2  C  601