BAC Information

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BAC

Clone NameB6Ng01-232D21
Chromosome17 (Build37)
Map Location 61,598,290 - 61,599,430
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043549, LOC433129, EG620725
Downstream geneLOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232D21.bB6Ng01-232D21.g
ACCGA044629GA044630
length1,140968
definitionB6Ng01-232D21.b B6Ng01-232D21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaatactccaacagacttcacctttttaaaaatactgataga
ctgtcagttgtggtatgtcatgtttgtaattcgaagtcttgggaggctaa
tgtagaaggataatgattttaagacaagcctgggctacagtgcaatttat
atggccccttgagttatatagagatggattaaattcttctacaaagcaac
cactcaacaaatgtaaactctattttcctgtgtttatataaatcactgaa
tcacaaagcaatttaccaagagatatgaagttctcactgaatgttaatag
cttaaatgctgtttgtagtatttaccaaatgcatgaggaaggagatgggt
gagaagatggtattattagttgacttttatttagtacacccttattaaga
acctactgtcctatagatctgctttaaaacatacatgagaaatataagtt
aggaagttaaaacaatcaaagaagtaagcatagaaaagcttcagtttcca
tagctacaatccaattgagtcacttgccttgtcctggatcccaaggatag
tctgaattggcacagatagtttaacttcattagtaaaatttgcagagttt
ccatattatctttgtagtcacatacatggtcatattttctgttcttgtct
atcacacgtttcacaacaaggccggaaatattttgaaatctgtcatgggt
ggaagtgattctctgtcagttttaaatagtcacattaccattatctatct
gcatgtaataacagcttcatggaaaacttctccgaacctgtataaaataa
acaaaacaaaatgtattataataccatgaagattatgatataacttaaag
gcagtaatagtgtcaggccttgggacctcccctttgagctggatccctct
ttgggcctgtcactggaccttcttttcctcagcacctctccatttccatt
cctgtaattcttttcagacatgagcaattatggtcagagttttgactatg
ggatgctgcccatcccctcattgatgacctgtcttccttttggagttagg
ctctacatgtttctcttctgtacctgtggggattcatcttaagtctttcc
cttgagtctggagagaactctaacctactaggagtctcta

gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattgggcatagtactaccggaggatcccacaataccactcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgcttcactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtatatttacacaatg
gaatactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcttgagtgaggtaacccaatcacaaagg
aactcgcacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacacatgaaattcaaga
agaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatagaaggagttacagagacaaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
aggacccagatataactcttctcttgtgagactattgccaggggcctagc
aacacagaagtgggatgatcacagtcagctattgggatggggtcacaagg
gactccaaatgggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61598290_61599430
seq2: B6Ng01-232D21.b_44_1183 (reverse)

seq1  TAGAGA--CCTGGTAGGTGAGAG-TCTCTCAGGACTCAAAGGGAAGGACC  47
      ||||||  ||| |||||| |||| ||||||  ||||| ||||||| ||| 
seq2  TAGAGACTCCTAGTAGGTTAGAGTTCTCTCCAGACTC-AAGGGAAAGACT  49

seq1  TTAGATGAAATCCCCAACAGTACAGAGAAGGAACATGTAGAGCCTAACTC  97
      | ||||| ||||||||   |||||||  || |||||||||||||||||||
seq2  TAAGATG-AATCCCCACAGGTACAGAAGAGAAACATGTAGAGCCTAACTC  98

seq1  CAAAAGGAAGACAGGTCATCAAATGAGGGGATGGGGCAGCATCCCATAGT  147
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  CAAAAGGAAGACAGGTCATC-AATGAGGGGAT-GGGCAGCATCCCATAGT  146

seq1  CAAAACTCTGACCCATAATTGCTCATGTCTG-AAAGAATTACAGGGATGG  196
      ||||||||||| ||||||||||||||||||| ||||||||||||| ||||
seq2  CAAAACTCTGA-CCATAATTGCTCATGTCTGAAAAGAATTACAGGAATGG  195

seq1  AAATGGAGAGGTGCCTGAGGAAAAGAAGGTCCAGTGACAGGCCCAAAGAG  246
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGAGGTG-CTGAGGAAAAGAAGGTCCAGTGACAGGCCCAAAGAG  244

seq1  GGATCCAGCTC-AAGGGGAGGTCCCAAGGCCTGACACTATTACTGCCTTT  295
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGATCCAGCTCAAAGGGGAGGTCCCAAGGCCTGACACTATTACTGCCTTT  294

seq1  AAGTTATATCATAATCTTCATGGTATTATAATACATTTTGTTTTGTTTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATATCATAATCTTCATGGTATTATAATACATTTTGTTTTGTTTAT  344

seq1  TTTATACAGGTTCGGAGAAGTTTTCCATGAAGCTGTTATTACATGCAGAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACAGGTTCGGAGAAGTTTTCCATGAAGCTGTTATTACATGCAGAT  394

seq1  AGATAATGGTAATGTGACTATTTAAAACTGACAGAGAATCACTTCCACCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGGTAATGTGACTATTTAAAACTGACAGAGAATCACTTCCACCC  444

seq1  ATGACAGATTTCAAAATATTTCCGGCCTTGTTGTGAAACGTGTGATAGAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGATTTCAAAATATTTCCGGCCTTGTTGTGAAACGTGTGATAGAC  494

seq1  AAGAACAGAAAATATGACCATGTATGTGACTACAAAGATAATATGGAAAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGAAAATATGACCATGTATGTGACTACAAAGATAATATGGAAAC  544

seq1  TCTGCAAATTTTACTAATGAAGTTAAACTATCTGTGCCAATTCAGACTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAATTTTACTAATGAAGTTAAACTATCTGTGCCAATTCAGACTAT  594

seq1  CCTTGGGATCCAGGACAAGGCAAGTGACTCAATTGGATTGTAGCTATGGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGATCCAGGACAAGGCAAGTGACTCAATTGGATTGTAGCTATGGA  644

seq1  AACTGAAGCTTTTCTATGCTTACTTCTTTGATTGTTTTAACTTCCTAACT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGCTTTTCTATGCTTACTTCTTTGATTGTTTTAACTTCCTAACT  694

seq1  TATATTTCTCATGTATGTTTTAAAGCAGATCTATAGGACAGTAGGTTCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTCATGTATGTTTTAAAGCAGATCTATAGGACAGTAGGTTCTT  744

seq1  AATAAGGGTGTACTAAATAAAAGTCAACTAATAATACCATCTTCTCACCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGGTGTACTAAATAAAAGTCAACTAATAATACCATCTTCTCACCC  794

seq1  ATCTCCTTCCTCATGCATTTGGTAAATACTACAAACAGCATTTAAGCTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTCCTCATGCATTTGGTAAATACTACAAACAGCATTTAAGCTAT  844

seq1  TAACATTCAGTGAGAACTTCATATCTCTTGGTAAATTGCTTTGTGATTCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTCAGTGAGAACTTCATATCTCTTGGTAAATTGCTTTGTGATTCA  894

seq1  GTGATTTATATAAACACAGGAAAATAGAGTTTACATTTGTTGAGTGGTTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTATATAAACACAGGAAAATAGAGTTTACATTTGTTGAGTGGTTG  944

seq1  CTTTGTAGAAGAATTTAATCCATCTCTATATAACTCAAGGGGCCATATAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGAAGAATTTAATCCATCTCTATATAACTCAAGGGGCCATATAA  994

seq1  ATTGCACTGTAGCCCAGGCTTGTCTTAAAATCATTATCCTTCTACATTAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACTGTAGCCCAGGCTTGTCTTAAAATCATTATCCTTCTACATTAG  1044

seq1  CCTCCCAAGACTTCGAATTACAAACATGACATACCACAACTGACAGTCTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAAGACTTCGAATTACAAACATGACATACCACAACTGACAGTCTA  1094

seq1  TCAGTATTTTTAAAAAGGTGAAGTCTGTTGGAGTATTAGAGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATTTTTAAAAAGGTGAAGTCTGTTGGAGTATTAGAGAATTC  1140


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