BAC Information

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BAC

Clone NameB6Ng01-235A16
Chromosome17 (Build37)
Map Location 22,205,011 - 22,205,539
singlet/doubletsinglet
Overlap geneEG665844
Upstream geneLOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010
Downstream geneEG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235A16.bB6Ng01-235A16.g
ACCGA046624GA046625
length7151,182
definitionB6Ng01-235A16.b B6Ng01-235A16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgatgaatactaagactgcctttatgggaaaagtatttttca
cattcactacatttgtaaggcttctctcctgtatgaattctctgatgact
tctaaggctgcttttaaacctaaaccatttgtcacattcattacatttgt
aaggtttctctcctgtatgaattctctcatgtcttctaagatcaccaact
agattgaaacatttcttacattcactacatttgtaagttttcttgcctgt
atgacgcatctgatgaatactaagactgcttttttggttaaaggatttgc
cacattcactacatttgtaaggtttctctcctgtatgaattctctgatgt
gctctaaacgagcatttctgggcaaaacatttgtcacattcactacattt
gtaaggtttctctcctgtatgaattctctgatgtcttctaagatcaccaa
cttgactgaaacatttctcacattcactacatttgtaaggtttcttgcct
gcatgacgcatctgatgaatactaagactgcctttttgggtaaaggattt
gtcacattcactacatttgtaaggtttctctcctgtatgagttatctgat
gttttctaaaaaagtattttcttggcaaaacattttgcacattcactaca
tttgtaggtttctttccacttttgggtttgtttcacatgaggatttcttt
agagtcaaaaacatc
gaattcatacaggagagaaaccttacaaatgtagtgaatgtgacaaaagc
tttacccaaaaaggcagtcttagtattcatcagagaattcatgcaggaga
gaaaccttacagatgtagtgaatgtgacaaaggctttactctaaaatgca
gtcttatcattcatcaaataattcatacaggagagaaagcttacaaatgt
agtgaatgtgacaaatgcttttccctcaaaagtgatcttagtattcatca
aagaattcatacaggagaaaaactttatagatgtagtgagtgtgataaat
gctttacaaagaaatatcgtcttagaagtcatcagacaattcatacagga
gagaaaccttacaagtgcagtgaatgtgacaaatcttttaccctgaaagg
ccatcttagaattcatcaacgaattcatacaggagagaaaccttacaaat
gtaatgaatgtgacaaatgctttactcaaaaatgcagtcttattattcat
cacagaattcatgccggagaaaaaccctacaaatgtagtgaatgtgacaa
atactacactcgaaaaagccatcttattgttcatcagcgcattcacatag
gagaaaaaccttacaaatgcagtgaatgtaacaaatgctttaccaacaaa
tattgtcttagaactcatcagagaatacattcagctaataagccttacaa
atgtagtgaatgtgacaaatcttttgccctgaatgccaggctcaggtgtc
atcggattattcatacaggagaaaaaccatacaaatgtagtaaatgtggc
aaatactttacccaaaaaggaagtcttataattcatcagagaattcatac
aggagagaaaccttacaaatgtagtgaatgtgacaagtactttacccgaa
aagcagtcttaatgtgcaccagagagttcatacaggagagaaaccttaca
aatgtagtgaatgtgacaaatgcttttcccataaggtgatcttagaaaca
tcagagaatcataacagagaaagacctacagaatatgatgtaacatgtgc
ttacctaaaattcatgtcatctcatagagatcatacaggagagaagccta
caaatatagtgaatgtgacatgctaacctgcaagcagtctttaaaattcc
atccagagaaatcactgtgcagctagatacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22205011_22205539
seq2: B6Ng01-235A16.b_232_760

seq1  TAAGATCACCAACTAGATTGAAACATTTCTTACATTCACTACATTTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCACCAACTAGATTGAAACATTTCTTACATTCACTACATTTGTAA  50

seq1  GTTTTCTTGCCTGTATGACGCATCTGATGAATACTAAGACTGCTTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTGCCTGTATGACGCATCTGATGAATACTAAGACTGCTTTTTTG  100

seq1  GTTAAAGGATTTGCCACATTCACTACATTTGTAAGGTTTCTCTCCTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGGATTTGCCACATTCACTACATTTGTAAGGTTTCTCTCCTGTAT  150

seq1  GAATTCTCTGATGTGCTCTAAACGAGCATTTCTGGGCAAAACATTTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATGTGCTCTAAACGAGCATTTCTGGGCAAAACATTTGTCA  200

seq1  CATTCACTACATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTACATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGTCT  250

seq1  TCTAAGATCACCAACTTGACTGAAACATTTCTCACATTCACTACATTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGATCACCAACTTGACTGAAACATTTCTCACATTCACTACATTTGT  300

seq1  AAGGTTTCTTGCCTGCATGACGCATCTGATGAATACTAAGACTGCCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCTTGCCTGCATGACGCATCTGATGAATACTAAGACTGCCTTTT  350

seq1  TGGGTAAAGGATTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAAGGATTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGT  400

seq1  ATGAGTTATCTGATGTTTTCTAAAAAAGTA-TTTCTTGGCAAAACATTTT  449
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGAGTTATCTGATGTTTTCTAAAAAAGTATTTTCTTGGCAAAACATTTT  450

seq1  GCACATTCACTACATTTGTAAGGTTTCTTTCCACTTTT-GGTTTGTTTCA  498
      ||||||||||||||||||| |||||||||||||||||| |||||||||| 
seq2  GCACATTCACTACATTTGT-AGGTTTCTTTCCACTTTTGGGTTTGTTTC-  498

seq1  ACATGAGGATTTCTTTAGAGTCAAAAACATC  529
      |||||||||||||||||||||||||||||||
seq2  ACATGAGGATTTCTTTAGAGTCAAAAACATC  529