MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-238M17
Chromosome	17 (Build37)
Map Location	78,330,432 - 78,485,814
singlet/doublet	doublet
Overlap gene	none
Upstream gene	EG624348, LOC545234, LOC100043887
Downstream gene	LOC668795, LOC383275, Crim1, Fez2, LOC100043888, Hdac1-ps, Vit, Strn, Heatr5b, 2310002B06Rik, EG625054, Eif2ak2, 2410078J06Rik, Cebpz, 2410091C18Rik, Prkcn, LOC675425, Qpct
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG624348 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624348 MGI:3647560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC545234 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC100043887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC668795 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668795
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC383275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Crim1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50766 MGI:1354756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fez2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225020 MGI:2675856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Hdac1-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:15181
definition	gene_synonym : HD1; Hdac1; RPD3 note : histone deacetylase 1 pseudogene pseudo : _no_value

name	Vit (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74199 MGI:1921449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Strn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268980 MGI:1333757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Heatr5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320473 MGI:2444098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310002B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53951 MGI:1858435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625054 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625054 MGI:3644071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Eif2ak2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19106 MGI:1353449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410078J06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73671 MGI:1920921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins

name	Cebpz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12607 MGI:109386
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410091C18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73694 MGI:1920944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Prkcn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75292 MGI:1922542
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675425 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675425
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Qpct (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70536 MGI:1917786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crim1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131067 GeneID:50766 MGI:1354756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine rich transmembrane BMP regulator 1 (chordin like) transcript_id : NM_015800.2

name	Fez2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130929 GeneID:225020 MGI:2675856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fasciculation and elongation protein zeta 2 (zygin II) transcript_id : NM_199448.2

name	LOC100043888 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268917 GeneID:100043888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043888 transcript_id : XM_001481193.1

name	Vit (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037354 GeneID:74199 MGI:1921449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vitrin transcript_id : NM_028813.1

name	Strn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098077 GeneID:268980 MGI:1333757
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : striatin, calmodulin binding protein transcript_id : NM_011500.2

name	Heatr5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487156 GeneID:320473 MGI:2444098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 5B transcript_id : NM_001081179.1

name	2310002B06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130682 GeneID:53951 MGI:1858435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310002B06 gene transcript_id : NM_181649.4

name	Eif2ak2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227203 GeneID:19106 MGI:1353449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2-alpha kinase 2 transcript_id : NM_011163.3

name	2410078J06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268919 GeneID:73671 MGI:1920921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : RIKEN cDNA 2410078J06 gene, transcript variant 1 transcript_id : XM_356960.5

name	Cebpz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95006993 GeneID:12607 MGI:109386
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCAAT/enhancer binding protein zeta transcript_id : NM_001024806.2

name	2410091C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385424 GeneID:73694 MGI:1920944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410091C18 gene transcript_id : NM_028611.2

name	2410091C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450839 GeneID:73694 MGI:1920944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410091C18 gene transcript_id : NM_144760.1

name	Prkcn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753988 GeneID:75292 MGI:1922542
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, nu transcript_id : NM_029239.2

name	Qpct (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353769 GeneID:70536 MGI:1917786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaminyl-peptide cyclotransferase (glutaminyl cyclase) transcript_id : NM_027455.2

name	Crim1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71895029 CCDS:CCDS28976.1 GeneID:50766 MGI:1354756
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : cysteine-rich motor neuron 1 product : cysteine rich transmembrane BMP regulator 1 (chordin like) protein_id : NP_056615.1

name	Fez2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789098 CCDS:CCDS28977.1 GeneID:225020 MGI:2675856
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : zygin 2 product : fasciculation and elongation protein zeta 2 (zygin II) protein_id : NP_955519.1

name	LOC100043888 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268918 GeneID:100043888
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481243.1

name	Vit (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037355 GeneID:74199 MGI:1921449
definition	codon_start : 1 product : vitrin protein_id : NP_083089.1

name	Strn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098078 CCDS:CCDS28978.1 GeneID:268980 MGI:1333757
definition	GO_function : GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 product : striatin, calmodulin binding protein protein_id : NP_035630.2

name	Heatr5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487157 GeneID:320473 MGI:2444098
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : HEAT repeat containing 5B protein_id : NP_001074648.1

name	2310002B06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62461575 CCDS:CCDS28979.1 GeneID:53951 MGI:1858435
definition	codon_start : 1 product : hypothetical protein LOC53951 protein_id : NP_857632.2

name	Eif2ak2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755160 CCDS:CCDS28980.1 GeneID:19106 MGI:1353449
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006412 - protein biosynthesis [Evidence IDA]; GO:0009615 - response to virus [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006926 - virus-infected cell apoptosis [Evidence IDA] codon_start : 1 note : protein kinase, interferon inducible double stranded RNA dependent; T-cell viral integration site; eukaryotic translation initiation factor 2 alpha kinase 2; eIF-2 alpha; dsRNA-activated kinase; IFN- type I-induced and dsRNA-activated kinase; IFN-induced and double-stranded RNA-activated kinase product : protein kinase, interferon-inducible double stranded RNA dependent protein_id : NP_035293.1

name	2410078J06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268920 GeneID:73671 MGI:1920921
definition	codon_start : 1 product : hypothetical protein LOC73671 isoform 1 protein_id : XP_356960.5

name	Cebpz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67188876 CCDS:CCDS28981.1 GeneID:12607 MGI:109386
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CCAAT/enhancer binding protein alpha (C/EBP) related sequence 1; CCAAT-binding factor product : CCAAT/enhancer binding protein zeta protein_id : NP_001019977.1

name	2410091C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229156 CCDS:CCDS28982.1 GeneID:73694 MGI:1920944
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC73694 isoform 1 protein_id : NP_082887.1

name	2410091C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450840 GeneID:73694 MGI:1920944
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC73694 isoform 2 protein_id : NP_658905.1

name	Prkcn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753989 GeneID:75292 MGI:1922542
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : protein kinase D3 protein_id : NP_083515.2

name	Qpct (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625782 CCDS:CCDS28983.1 GeneID:70536 MGI:1917786
definition	GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016603 - glutaminyl-peptide cyclotransferase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : glutaminyl-peptide cyclotransferase (glutaminyl cyclase) protein_id : NP_081731.1

name	EG624348 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624348
definition	number : 1 pseudo : _no_value

name	LOC545234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:545234
definition	number : 1 pseudo : _no_value

name	LOC100043887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043887
definition	number : 1 pseudo : _no_value

name	LOC668795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668795
definition	number : 1 pseudo : _no_value

name	LOC383275 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383275
definition	number : 1 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 1 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 2 pseudo : _no_value

name	LOC675425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675425
definition	number : 3 pseudo : _no_value

name	EG625054 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:126090591 GeneID:625054 MGI:3644071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG625054 pseudo : _no_value transcript_id : NR_003363.1

clone name	MSMg01-360F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-237L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-329E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-238M17.b	B6Ng01-238M17.g
ACC	GA049396	GA049397
length	1,085	1,134
definition	B6Ng01-238M17.b	B6Ng01-238M17.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(78,330,432 - 78,331,526)	(78,484,693 - 78,485,814)
sequence	gaattcagtaccatccatagagcgttatttgtattctccatcattttggt ctaattcctactcagagtgttttcttgggtttcgagcaccaggagaataa tccacctacagacttgaccatatgggatgcagtgcatattctccagtggc ctgggtctaatcctaattgtcaccagcaaagccaaaatgtgtcactccaa acatgggcagggatgctcttgggcattcataaaatgcttaatggagcatt caggctgctgctgctgacggggtgtgttttaattagacttctaagtgcgc atctatttgtcccactagaccagccctatagtcaggtgaaagagagtccc catggctgtaggtgtcaaacagtgcctaggaagcctgaccatcttaacag acatgtagggtaggtatttaaaagcctaatttgaagaaaattgcccacct gacagtgatgtcatcaccttgtacttttctacttttacccctagaccttt tctcttggaaactggtagctgtcttcaattagcctcttcggattggttca gtgtcaattttgctattgaatgtgttccacctttctatgtatatactata attcaaatgtttacaaaatgcaaagcttgccaaaacaaaaagcacttctg ggcccaatttggctgacagactagcagtctataaactttgtcttatatgg gttattgatatatttctctccatcaaacaggacctgacgttattataaaa agggaagccgtgatgtctttacttagcaattaattcccagaaagattctt gctatgaattaaaatggagtaggatggagatggattcagactggggagat atcagaatgaagttttgtagttgctgaattagaagtgaaagtaaggccat tgaactttatctttgaaataatggcctctgaaattacagtgagcacagcg tgtgtataatgtgaagaaaggagtttgaaacagaataatagtctcttctc gagtgtgcgcaataatattggcttcagatttttttttctaacttagttct gagaggaagatctttaaatcacttcatgaaatttc	gaattcaaggggaactcaattccaacaccctgtcccaccttggcagagaa agacagtagatgaagacccaaactcaacccttcggtgtctttgttattgt catagacttgaaacagaaacttgaacaaatatacttctctcatctgttta tttgaatcagaaatatgaaggaacgttgccagaaaagcttagagccttcg gtcaagaaggcagaatgttcagagttgtagcaaacttacaagccagtata aaccatagaagatcaggattctcttctgagaagagccaaaaatgaagcaa gcattcagagggaaattgagatgccccgagagagagattataggacttcc ttgcttctagtttcctgaaatctcttgaaaatatatctctagtcctgaga tttgagatgcttgcagtgtccctacatacggtccactcccaatgctgttt atgcttgttacagcccagctagctaagctaatagttgtctctaagcacaa atgactatctcaagtatgtggtcagagagcgatgtttctcattctttatt ttactgcttccttttattcctttaagaaataggtttctttctgaaatata atattcccttctaatgtgactgcttcaaaggatatgtgctagtgatggac atctctgaaaaagccacaatcaagatattggaatattttgatccaaaccc atacacttgaatataattttccttctagtaactccatgtttgacatgctt tttttctaagttataatgaacaatctccaatgattttcagagatataata ataagcaattcaacaagaaaggggaaatgggtattattggaatgtgtaga agcaactagacattgaactcaactttcaaatgtgtatgtttagatatctc cttaccaacttgaacaagatatcgtttaattttacagaataccaacttaa gcactggagaatttatgtgcttgattttaaagtgtactattactctaatc cagattaccttctctgtccagctggtggccacgggcaagaatgtaggtag gaggagcctgggggaataaggtctatcttggagtctctttcccaatacag gcctctcctaggtaacctggaccatttctggtcc
quality values	Open. 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Hide. 62 47 33 47 62 38 39 47 62 62 43 51 37 13 24 21 20 13 13 28 38 62 44 29 62 54 44 62 62 62 62 47 59 62 62 59 51 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 51 41 59 43 38 38 38 40 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 59 59 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 46 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 54 62 54 54 54 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 49 47 62 62 62 62 62 62 49 62 62 62 62 58 58 54 54 58 58 58 58 58 58 58 54 58 48 58 58 58 45 58 58 58 58 52 58 58 58 58 58 43 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 49 58 58 58 58 54 58 58 58 54 58 58 58 49 58 54 58 54 49 58 58 58 58 58 58 58 54 58 58 58 58 52 58 51 58 47 48 49 49 49 58 58 58 48 49 51 54 58 58 42 41 58 58 58 52 51 58 54 58 46 50 58 40 49 58 39 54 50 48 58 41 26 58 52 58 54 58 53 53 51 49 54 58 53 58 51 51 42 58 58 54 51 51 58 58 58 54 53 52 58 50 58 58 50 50 49 54 51 58 58 58 43 50 58 42 51 49 58 50 41 40 46 39 58 58 51 44 58 50 51 49 50 50 58 51 50 52 52 50 49 40 52 41 51 52 58 58 49 49 54 45 39 51 52 54 31 51 38 37 50 58 41 58 51 42 34 54 47 49 53 39 24 41 49 54 52 54 49 49 52 39 53 54 41 32 49 51 53 42 37 50 53 53 51 41 49 39 54 54 54 54 29 53 53 37 53 32 40 40 49 31 49 32 32 24 30 41 38 51 42 37 45 45 31 17 54 54 41 47 34 42 25 32 13 54 34 18 54 47 32 53 42 45 32 42 25 27 38 53 53 42 42 40 33 45 37 54 52 34 42 53 31 42 52 32 45 34 35 37 35 37 52 32 34 26 26 53 33 52 38 32 35 31 25 32 32 40 40 53 52 51 49 49 32 41 32 31 33 34 41 31 29 26 31 29 31 39 26 43 37 30 31 32 45 42 31 31 31 30 28 42 37 28 47 51 42 33 33 22 51 24 31 33 29 31 33 34 31 27 33 30 32 41 31 31 24 30 31 31 33 22 38 42 15 22 27 17 46 9 29 46 46 16 41 46 31 31 35 47 21 25 31 31 31 31 25 46 24 12 32 28 26 41 31 42 32 34 31 35 33 23 31 10 35 31 32 29 28 31 31 18 43 38 32 33 29 37 31 31 24 23 34 37 48 37 30 23 46 30 24 37 29 31 29 36 31 37 31 48 36 31 24 36 24 23 32 26 33 30 16 25 23 14 11 31 13 22 33 22 16 29 18 22 26 23 37 28 18 5 8 9 15 32 36 48 26 25 21 35 48 44 27 9 22 15 21 27 15 27 22 21 22 16 13 30 22 32 14 17 25 34 27 34 27 23 20 22 16 18 29 15 36 13 6 7 22 15 32 15 19 9 22 21 28 48 48 24 18 43 21 14 6 9 28 17 32 25 24 13 25 14 24 8 3 6 13 11 16 20 26 20 10 18 20 18 14 14 14 14 13 20 22 11 17 28 19 14 15 22 16 27 13 9 5 6 9 19 3 11 11 27 7 29 14 7 7 8 7 16 16 12 19 28 20 11 12 6 6 7 5 6 7 10 23 10 14 10 9 17 29 29 28 23 13 16 7 6 18 9 17 4 19 6 13 10 11 5 15 6 5 5 3 5 6 4 4 6 20 8 7 18 23 10 10 6 4 9 6 4 3 4 6 7 8 17 5 22 5 9 5 12 21 5 7 6 6 7 17 8 20 8 6 3 18 14 6 6 6 22 5 1 3 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_78330432_78331526
seq2: B6Ng01-238M17.b_45_1129

seq1  GAATTCAGTACCATCCATAGAGCGTTATTTGTATTCTCCATCATTTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACCATCCATAGAGCGTTATTTGTATTCTCCATCATTTTGGT  50

seq1  CTAATTCCTACTCAGAGTGTTTTCTTGGGTTTCGAGCACCAGGAGAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCCTACTCAGAGTGTTTTCTTGGGTTTCGAGCACCAGGAGAATAA  100

seq1  TCCACCTACAGACTTGACCATATGGGATGCAGTGCATATTCTCCAGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTACAGACTTGACCATATGGGATGCAGTGCATATTCTCCAGTGGC  150

seq1  CTGGGTCTAATCCTAATTGTCACCAGCAAAGCCAAAATGTGTCACTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTAATCCTAATTGTCACCAGCAAAGCCAAAATGTGTCACTCCAA  200

seq1  ACATGGGCAGGGATGCTCTTGGGCATTCATAAAATGCTTAATGGAGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGCAGGGATGCTCTTGGGCATTCATAAAATGCTTAATGGAGCATT  250

seq1  CAGGCTGCTGCTGCTGACGGGGTGTGTTTTAATTAGACTTCTAAGTGCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGCTGCTGCTGACGGGGTGTGTTTTAATTAGACTTCTAAGTGCGC  300

seq1  ATCTATTTGTCCCACTAGACCAGCCCTATAGTCAGGTGAAAGAGAGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTGTCCCACTAGACCAGCCCTATAGTCAGGTGAAAGAGAGTCCC  350

seq1  CATGGCTGTAGGTGTCAAACAGTGCCTAGGAAGCCTGACCATCTTAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGTAGGTGTCAAACAGTGCCTAGGAAGCCTGACCATCTTAACAG  400

seq1  ACATGTAGGGTAGGTATTTAAAAGCCTAATTTGAAGAAAATTGCCCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAGGGTAGGTATTTAAAAGCCTAATTTGAAGAAAATTGCCCACCT  450

seq1  GACAGTGATGTCATCACCTTGTACTTTTCTACTTTTACCCCTAGACCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGATGTCATCACCTTGTACTTTTCTACTTTTACCCCTAGACCTTT  500

seq1  TCTCTTGGAAACTGGTAGCTGTCTTCAATTAGCCTCTTCGGATTGGTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGAAACTGGTAGCTGTCTTCAATTAGCCTCTTCGGATTGGTTCA  550

seq1  GTGTCAATTTTGCTATTGAATGTGTTCCACCTTTCTATGTATATACTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAATTTTGCTATTGAATGTGTTCCACCTTTCTATGTATATACTATA  600

seq1  ATTCAAATGTTTACAAAATGCAAAGCTTGCCAAAACAAAAAGCACTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATGTTTACAAAATGCAAAGCTTGCCAAAACAAAAAGCACTTCTG  650

seq1  GGCCCAATTTGGCTGACAGACTAGCAGTCTATAAACTTTGTCTTATATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAATTTGGCTGACAGACTAGCAGTCTATAAACTTTGTCTTATATGG  700

seq1  GTTATTGATATATTTCTCTCCATCAAACAGGACCTGACGTTATTATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGATATATTTCTCTCCATCAAACAGGACCTGACGTTATTATAAAA  750

seq1  AGGGAAGCCGTGATGTCTTTACTTAGCAATTAATTCCCAGAAAGATTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGCCGTGATGTCTTTACTTAGCAATTAATTCCCAGAAAGATTCTT  800

seq1  GCTATGAATTAAAATGGAGTAGGATGGAGATGGATTCAGACTGGGGAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGAATTAAAATGGAGTAGGATGGAGATGGATTCAGACTGGGGAGAT  850

seq1  ATCAGAATGAAGTTTTGTAGTTGCTGAATTAGAAGTGAAAGTAAGGCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATGAAGTTTTGTAGTTGCTGAATTAGAAGTGAAAGTAAGGCCAT  900

seq1  TGAACTTTATCTTTGAAAATAATGGCCTCTGAAATTACAAGTGAGCACAG  950
      ||||||||||||||| |||||||||||||||||||||| |||||||||| 
seq2  TGAACTTTATCTTTG-AAATAATGGCCTCTGAAATTAC-AGTGAGCACA-  947

seq1  GCGTGTGTATAAATGTGAAGAAAAGAGTTTGAAACAG-ATAATAGTCTCT  999
      |||||||||| |||||||||||| ||||||||||||| ||||||||||||
seq2  GCGTGTGTAT-AATGTGAAGAAAGGAGTTTGAAACAGAATAATAGTCTCT  996

seq1  TCCTCGAAGTGTGCGCAATAAAATTGGCTTCAGATTTTTTTTTCTAACTG  1049
      | |||| |||||||||||||| ||||||||||||||||||||||||||| 
seq2  T-CTCG-AGTGTGCGCAATAATATTGGCTTCAGATTTTTTTTTCTAACT-  1043

seq1  TAGTTCTGAGAGGAAGATCTTTAAAATTCTACTTCAATGAAATTTC  1095
      |||||||||||||||||||||||||  || ||||| ||||||||||
seq2  TAGTTCTGAGAGGAAGATCTTTAAA--TC-ACTTC-ATGAAATTTC  1085

seq1: chr17_78484693_78485814
seq2: B6Ng01-238M17.g_67_1200 (reverse)

seq1  GGACCAGAAAAG--TCAG--TAACTAGGA-AGAC---TGATGGGAAAGAG  42
      |||||||||| |   |||  || |||||| || |   |  ||||||||||
seq2  GGACCAGAAATGGTCCAGGTTACCTAGGAGAGGCCTGTATTGGGAAAGAG  50

seq1  ACTCAAAGATAGACCTTA-TCCCCCA-GCTCCT-CTACCTACA-TCT--G  86
      |||| ||||||||||||| ||||||| |||||| ||||||||| |||   
seq2  ACTCCAAGATAGACCTTATTCCCCCAGGCTCCTCCTACCTACATTCTTGC  100

seq1  CCGTGGCCA-CAGCTGGACAGAAGAAGGTAAATCTGGATTAGAGTAATAG  135
      ||||||||| ||||||||||| ||||||| ||||||||||||||||||||
seq2  CCGTGGCCACCAGCTGGACAG-AGAAGGT-AATCTGGATTAGAGTAATAG  148

seq1  TAACACTTTAAAATCAAGCACATTAAATTCTCCAGTGCTTAAGTTGGTAT  185
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  T-ACACTTTAAAATCAAGCACA-TAAATTCTCCAGTGCTTAAGTTGGTAT  196

seq1  TCTGTAAAATTAAACGATATCTTGTTCAAGTTGGTAAGGAGATATCTAAA  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAAATTAAACGATATCTTGTTCAAGTTGGTAAGGAGATATCTAAA  246

seq1  CATACACATTTGAAAGTTGAGTTCAATGTCTAGTTGCTTCTACACATTCC  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACATTTGAAAGTTGAGTTCAATGTCTAGTTGCTTCTACACATTCC  296

seq1  AATAATACCCATTTCCCC-TTCTTGTTGAATTGCTTATTATTATATCTCT  334
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AATAATACCCATTTCCCCTTTCTTGTTGAATTGCTTATTATTATATCTCT  346

seq1  GAAAATCATTGGAGATTGTTCATTATAACTTAGAAAAAAAGCATGTCAAA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCATTGGAGATTGTTCATTATAACTTAGAAAAAAAGCATGTCAAA  396

seq1  CATGGAGTTACTAGAAGGAAAATTATATTCAAGTGTATGGGTTTGGATCA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGTTACTAGAAGGAAAATTATATTCAAGTGTATGGGTTTGGATCA  446

seq1  AAATATTCCAATATCTTGATTGTGGCTTTTTCAGAGATGTCCATCACTAG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCCAATATCTTGATTGTGGCTTTTTCAGAGATGTCCATCACTAG  496

seq1  CACATATCCTTTGAAGCAGTCACATTAGAAGGGAATATTATATTTCAGAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATCCTTTGAAGCAGTCACATTAGAAGGGAATATTATATTTCAGAA  546

seq1  AGAAACCTATTTCTTAAAGGAATAAAAGGAAGCAGTAAAATAAAGAATGA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTATTTCTTAAAGGAATAAAAGGAAGCAGTAAAATAAAGAATGA  596

seq1  GAAACATCGCTCTCTGACCACATACTTGAGATAGTCATTTGTGCTTAGAG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCGCTCTCTGACCACATACTTGAGATAGTCATTTGTGCTTAGAG  646

seq1  ACAACTATTAGCTTAGCTAGCTGGGCTGTAACAAGCATAAACAGCATTGG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTATTAGCTTAGCTAGCTGGGCTGTAACAAGCATAAACAGCATTGG  696

seq1  GAGTGGACCGTATGTAGGGACACTGCAAGCATCTCAAATCTCAGGACTAG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGACCGTATGTAGGGACACTGCAAGCATCTCAAATCTCAGGACTAG  746

seq1  AGATATATTTTCAAGAGATTTCAGGAAACTAGAAGCAAGGAAGTCCTATA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATATTTTCAAGAGATTTCAGGAAACTAGAAGCAAGGAAGTCCTATA  796

seq1  ATCTCTCTCTCGGGGCATCTCAATTTCCCTCTGAATGCTTGCTTCATTTT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTCTCGGGGCATCTCAATTTCCCTCTGAATGCTTGCTTCATTTT  846

seq1  TGGCTCTTCTCAGAAGAGAATCCTGATCTTCTATGGTTTATACTGGCTTG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTTCTCAGAAGAGAATCCTGATCTTCTATGGTTTATACTGGCTTG  896

seq1  TAAGTTTGCTACAACTCTGAACATTCTGCCTTCTTGACCGAAGGCTCTAA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGCTACAACTCTGAACATTCTGCCTTCTTGACCGAAGGCTCTAA  946

seq1  GCTTTTCTGGCAACGTTCCTTCATATTTCTGATTCAAATAAACAGATGAG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTGGCAACGTTCCTTCATATTTCTGATTCAAATAAACAGATGAG  996

seq1  AGAAGTATATTTGTTCAAGTTTCTGTTTCAAGTCTATGACAATAACAAAG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATATTTGTTCAAGTTTCTGTTTCAAGTCTATGACAATAACAAAG  1046

seq1  ACACCGAAGGGTTGAGTTTGGGTCTTCATCTACTGTCTTTCTCTGCCAAG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGAAGGGTTGAGTTTGGGTCTTCATCTACTGTCTTTCTCTGCCAAG  1096

seq1  GTGGGACAGGGTGTTGGAATTGAGTTCCCCTTGAATTC  1122
      ||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACAGGGTGTTGGAATTGAGTTCCCCTTGAATTC  1134

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information