BAC Information

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BAC

Clone NameB6Ng01-242B19
Chromosome17 (Build37)
Map Location 17,060,594 - 17,061,123
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085
Downstream geneBC002059, BC018101, Zfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242B19.bB6Ng01-242B19.g
ACCGA051848GA051849
length1,202528
definitionB6Ng01-242B19.b B6Ng01-242B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccttagagtagaaactctaaggggaggctctgaggacacaatgg
ggtaaccttagtcaaaagtgcaatagagggagtaaggaacctgaggagac
cacctccaccccagtggaggccctcacattcaaaattttccgttcaaaat
tgttcctttctaaaaagaatgtgaggacaaaaatggagcagagcacgaac
aaatggctgaatattttctggcccaacttgggattcatctcctgggtggt
caccaaaccctaacattattactgatgctatgctatgcctgcagacagga
gcttagcatgggtgttctctgagaggctctaccagtaactgaatgagaga
tggagatattcacagccaagcattggataggtaggattaatatagtgaaa
atatgcaagttaccaagtgcaatctacaggttcagtgtaaccccattaac
attctaacacaactttttttttttacaaatattgaaagagaaattctcaa
cttcatagggggaaaacaaaacaaatcaacaaaacaaaacaaaacaagga
aagtcaaaacaatcctaaacagcaaaagaacttcaataggaatcaccatc
cctcaacttaagctgcactattgctcaagcaatagcgatgaaaactgcat
gatattggtacaaaaacagatatgtggaccaatggaatcgacccaaagac
ctacaaacaaaccaatttgattttttgataaggaaagaaaagcaaacaat
ggaaaaaagaggacatcttcaagaaatggtactggtctaactggatatct
gcatgtgtaaaaatgaaaatagattcatatttatcactctgcacagaatt
caagtctgagtggatcaaggacctcaacataaaactggatgcaatgaatc
tcatagaatagaaagtaggaatgaaaaggtcagctcaggaactttgggaa
ggtcatgaagcacatgtgcctcagaagggagaggctaggtaccatttttc
agaccacagggaggaacagacctgtgggtggggacacattccacaggatg
tacattgcccacctcagaacaggaagtccttttcacttatttcttaaaga
ctaatcaggtttagatgcactgttcagtcaatcaattgtgctaggtcact
gaagttctcattctgcgccactgagaagacactatatactaagagatcgt
ac
aaaatttatggcatttaatgtaactcatgtttttattttgagatatcatc
tatctactttaattatgttcaatcaattagtatttgagaatacaggccac
taaaaccagagatgtaatgaattccacaattaaaatgtcaatcaacatga
tactatctcagtacatttattacagttgtgaaatgtgaaatctcttatga
aatatacttccctcaagaatataaaaactgtatatttgttttaaagtttt
acaatatactttagaaaagaaagatgcagcaaacttgcagagctagtctt
tgtctaaaattaacctgtgaatcagccagccatatacatgaacatggtat
acagataaaagaaagaacgaaagaacgaaagaaaggaaggaaggaaggaa
ggaaggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagagaagagagagaatg
aggaagaagggagggagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_17060594_17061123
seq2: B6Ng01-242B19.g_65_598

seq1  GAATTCAAAATTTATGGCATTTAATGTAACTCATGTTTTTATTTTGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTTATGGCATTTAATGTAACTCATGTTTTTATTTTGAGAT  50

seq1  ATCATCTATCTACTTTAATTATGTTCAATCAATTAGTATTTGAGAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTATCTACTTTAATTATGTTCAATCAATTAGTATTTGAGAATACA  100

seq1  GGCCACTAAAACCAGAGATGTAATGAATTCCACAATTAAAATGTCAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTAAAACCAGAGATGTAATGAATTCCACAATTAAAATGTCAATCA  150

seq1  ACATGATACTATCTCAGTACATTTATTACAGTTGTGAAATGTGAAATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATACTATCTCAGTACATTTATTACAGTTGTGAAATGTGAAATCTC  200

seq1  TTATGAAATATACTTCCCTCAAGAATATAAAAACTGTATATTTGTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAATATACTTCCCTCAAGAATATAAAAACTGTATATTTGTTTTAA  250

seq1  AGTTTTACAATATACTTTAGAAAAGAAAGATGCAGCAAACTTGCAGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACAATATACTTTAGAAAAGAAAGATGCAGCAAACTTGCAGAGCT  300

seq1  AGTCTTTGTCTAAAATTAACCTGTGAATCAGCCAGCCATATACATGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGTCTAAAATTAACCTGTGAATCAGCCAGCCATATACATGAACA  350

seq1  TGGTATACAGATAAAAGAAAGAACGAAAGAACGAAAGAAAGGAAGGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATACAGATAAAAGAAAGAACGAAAGAACGAAAGAAAGGAAGGAAGG  400

seq1  AAGGAAGGAAGGAAGG----AAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  446
      ||||||||||||||||    ||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  450

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGAGAG  500

seq1  AGAATGAGGAAGAAGGGAGGGAGGGAGGGAGGGA  530
      ||||||||||||||||||||||||||||||||||
seq2  AGAATGAGGAAGAAGGGAGGGAGGGAGGGAGGGA  534