BAC Information

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BAC

Clone NameB6Ng01-244A21
Chromosome17 (Build37)
Map Location 77,398,591 - 77,539,113
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043886, EG624348
Downstream geneLOC545234, LOC100043887, LOC668795
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244A21.bB6Ng01-244A21.g
ACCGA053283GA053284
length9781,113
definitionB6Ng01-244A21.b B6Ng01-244A21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,398,591 - 77,399,406)(77,537,994 - 77,539,113)
sequence
gaattcactcactctagtaagtttgtaatgaacgtcttacatgtaggaac
attttaaattaaaagagtttaatatatcctcttcaatctctatgtttctc
attttatttgttcttgcccctggctagggactcacatattaaagttacct
gagcaaacactgttgtcctttcccagtcctatgatcatttactcttgtgt
aggcatgctggctataaatgttaatggcgataccttatcagtcttgactt
ctttttatgagttggtttaaaaatattgctcatattattctttgggtagt
tgagtcatctgggagaaatgacctcaagtaacttttcacattctaagtat
ctatttttatgttttctgtgcagtgtgtccctccacattatttctctatt
tctatttaattcttctctttgtattattatttttaaatgttccttatata
ttctatataaaacctctttttgagaacagtattgatgaatatttatctca
attgttgtatttcattgcacaaactatattttgaaaattatttttatatt
tgtctaaattgatgtgttaatgaaacttagtgtttttcctcctatcaaaa
ctacctggacattttaatttaaaggcatcacaatttttgatataaaatta
attaacttcaatatggttaacccattgcatcacacttaacaatatacggt
attaacttctaactcattgttttgaattactgtttttaatggagagtttt
agaaaataaaatgttgagttgtttcctgttctttctccatcagatactaa
atgggttcaagcaatatttgttggaaagactttgaaaaaatctatttatg
tatgttggataattaattgtaaatgtgttctttcttgacttcattttctt
ccagttacctgctttacattttcttatcctgattagaatgccttgattac
tgcacttttagaaaaattcccttattta
gaattcaattgtgagtccttatgtgcctggggtatttgatttgaaaaact
ttttactgctgcttcaattgagttgcttgttatagctctgttaaatggat
catctgtctagaaatcactgtgttctagctttttacaaattattaaaatg
tagattttcaaaatatgccttaataattagtattttgatggtatctgatt
taatctctatcatttcatctagaatattattaattatggtaatttttaat
gttcgttttatcttagcaagtgtttggcttgctctgatttgcctacaaaa
atgtatcttatcttttatgtgctatcattctgatgttccaatgccattta
aatgtccaaagtctcttctatgctgttaatacctttgcaccagtgttaaa
tctgagacatggatggtactacagaatagtccacatatcaggtttttctc
tcaattaggatccaatacgcacatgtatagctagtggaatataatctata
attcctaggaaactttggattaccaaagtgcatttgatagtttgttagta
agatttttagatgtagtagaccaaggaaatagagtagggagaagctggag
agagaggagagggtagcataggaagagaagttgactatcttcttagaaga
gatctactaaacaatgaataacctttcatctctaatgaatatgtatgatt
tccagttatgcctggcgtgcgttattaagggctgggccatgaagggaatt
tccagttgtcagggattgtaagatctctgagctcctccagagtccataca
gtggttttccaagatctctctttgtgtatacagttgcaagcttctgggct
ttaagctgactccaataattttaggagacctgcagtacatgaagtgtatt
tgtaaatgcacagtgatttggtagtctttacattttttttcactagttta
ctatcttgtgcttgagttgtcaactgttctgctccttatctctggccatg
ggtattatatttcactcactgagagggatgagttactacttgcctcgtcc
agtcagagctggagcatctacttatgaaaccttcacaatatttctcccat
aagataaatatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77398591_77399406
seq2: B6Ng01-244A21.b_44_859

seq1  GAATTCACTCACTCTAGTAAGTTTGTAATGAACGTCTTACATGTAGGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACTCTAGTAAGTTTGTAATGAACGTCTTACATGTAGGAAC  50

seq1  ATTTTAAATTAAAAGAGTTTAATATATCCTCTTCAATCTCTATGTTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATTAAAAGAGTTTAATATATCCTCTTCAATCTCTATGTTTCTC  100

seq1  ATTTTATTTGTTCTTGCCCCTGGCTAGGGACTCACATATTAAAGTTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTGTTCTTGCCCCTGGCTAGGGACTCACATATTAAAGTTACCT  150

seq1  GAGCAAACACTGTTGTCCTTTCCCAGTCCTATGATCATTTACTCTTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAACACTGTTGTCCTTTCCCAGTCCTATGATCATTTACTCTTGTGT  200

seq1  AGGCATGCTGGCTATAAATGTTAATGGCGATACCTTATCAGTCTTGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCTGGCTATAAATGTTAATGGCGATACCTTATCAGTCTTGACTT  250

seq1  CTTTTTATGAGTTGGTTTAAAAATATTGCTCATATTATTCTTTGGGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGAGTTGGTTTAAAAATATTGCTCATATTATTCTTTGGGTAGT  300

seq1  TGAGTCATCTGGGAGAAATGACCTCAAGTAACTTTTCACATTCTAAGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATCTGGGAGAAATGACCTCAAGTAACTTTTCACATTCTAAGTAT  350

seq1  CTATTTTTATGTTTTCTGTGCAGTGTGTCCCTCCACATTATTTCTCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTATGTTTTCTGTGCAGTGTGTCCCTCCACATTATTTCTCTATT  400

seq1  TCTATTTAATTCTTCTCTTTGTATTATTATTTTTAAATGTTCCTTATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTAATTCTTCTCTTTGTATTATTATTTTTAAATGTTCCTTATATA  450

seq1  TTCTATATAAAACCTCTTTTTGAGAACAGTATTGATGAATATTTATCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATAAAACCTCTTTTTGAGAACAGTATTGATGAATATTTATCTCA  500

seq1  ATTGTTGTATTTCATTGCACAAACTATATTTTGAAAATTATTTTTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTATTTCATTGCACAAACTATATTTTGAAAATTATTTTTATATT  550

seq1  TGTCTAAATTGATGTGTTAATGAAACTTAGTGTTTTTCCTCCTATCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAATTGATGTGTTAATGAAACTTAGTGTTTTTCCTCCTATCAAAA  600

seq1  CTACCTGGACATTTTAATTTAAAGGCATCACAATTTTTGATATAAAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGGACATTTTAATTTAAAGGCATCACAATTTTTGATATAAAATTA  650

seq1  ATTAACTTCAATATGGTTAACCCATTGCATCACACTTAACAATATAC-GT  699
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTAACTTCAATATGGTTAACCCATTGCATCACACTTAACAATATACGGT  700

seq1  ATTAACTTCTAACTCATTGTTTTGAATTACTGTTTTTAATGGAGAGTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTCTAACTCATTGTTTTGAATTACTGTTTTTAATGGAGAGTTTT  750

seq1  AGAAAATAAAATGTTGAGTTGTTTCCTGTTCTTTCTCCATCAGGATACTA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGAAAATAAAATGTTGAGTTGTTTCCTGTTCTTTCTCCATCA-GATACTA  799

seq1  AATGGGTTCAAGCAATA  816
      |||||||||||||||||
seq2  AATGGGTTCAAGCAATA  816

seq1: chr17_77537994_77539113
seq2: B6Ng01-244A21.g_66_1178 (reverse)

seq1  GCATATTTATCTAATGGAAAAAATATT-TGAAAGTTTCATAAGTTAGATG  49
      |||||||||||| |||| | ||||||| |||| |||||||||| ||||||
seq2  GCATATTTATCTTATGGGAGAAATATTGTGAAGGTTTCATAAG-TAGATG  49

seq1  CTCCAGCTCTGACTGGACGAGGGCAAGTAAGTAACTCATCCCTCTTCAGT  99
      |||||||||||||||||||| ||||||| ||||||||||||||| |||||
seq2  CTCCAGCTCTGACTGGACGA-GGCAAGT-AGTAACTCATCCCTC-TCAGT  96

seq1  GAATTAAAATATAATA-CCATGG-CAGAGATAAGGAGCAG-ACAGTTGAC  146
      | | | |||||||||| |||||| |||||||||||||||| |||||||||
seq2  G-AGTGAAATATAATACCCATGGCCAGAGATAAGGAGCAGAACAGTTGAC  145

seq1  AACTCAAGCACAAGATAGTAAACTAAGTGAAAAAAAAATGTAAAGAACTA  196
      |||||||||||||||||||||||| |||| ||||||||||||||| ||||
seq2  AACTCAAGCACAAGATAGTAAACT-AGTG-AAAAAAAATGTAAAG-ACTA  192

seq1  CCAAATCAACTGTGCATTTACAAATACACTTCATGTACCTGCAGGTCTCC  246
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  CCAAATC-ACTGTGCATTTACAAATACACTTCATGTA-CTGCAGGTCTCC  240

seq1  TAAAAATTATTGGAGTCAGCTTAAAGCCCAGAAGCTTGCAACTGTATACA  296
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AAAATTATTGGAGTCAGCTTAAAGCCCAGAAGCTTGCAACTGTATACA  289

seq1  CAAAGAGAGATCTTGGAAAACCACTGTATGGACTCTGGAGGAGCTCAGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAGATCTTGGAAAACCACTGTATGGACTCTGGAGGAGCTCAGAG  339

seq1  ATCTTACAATCCCTGACAACTGGAAATTCCCTTCATGGCCCAGCCCTTAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACAATCCCTGACAACTGGAAATTCCCTTCATGGCCCAGCCCTTAA  389

seq1  TAACGCACGCCAGGCATAACTGGAAATCATACATATTCATTAGAGATGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGCACGCCAGGCATAACTGGAAATCATACATATTCATTAGAGATGAA  439

seq1  AGGTTATTCATTGTTTAGTAGATCTCTTCTAAGAAGATAGTCAACTTCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATTCATTGTTTAGTAGATCTCTTCTAAGAAGATAGTCAACTTCTC  489

seq1  TTCCTATGCTACCCTCTCCTCTCTCTCCAGCTTCTCCCTACTCTATTTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGCTACCCTCTCCTCTCTCTCCAGCTTCTCCCTACTCTATTTCC  539

seq1  TTGGTCTACTACATCTAAAAATCTTACTAACAAACTATCAAATGCACTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTACTACATCTAAAAATCTTACTAACAAACTATCAAATGCACTTT  589

seq1  GGTAATCCAAAGTTTCCTAGGAATTATAGATTATATTCCACTAGCTATAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATCCAAAGTTTCCTAGGAATTATAGATTATATTCCACTAGCTATAC  639

seq1  ATGTGCGTATTGGATCCTAATTGAGAGAAAAACCTGATATGTGGACTATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCGTATTGGATCCTAATTGAGAGAAAAACCTGATATGTGGACTATT  689

seq1  CTGTAGTACCATCCATGTCTCAGATTTAACACTGGTGCAAAGGTATTAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTACCATCCATGTCTCAGATTTAACACTGGTGCAAAGGTATTAAC  739

seq1  AGCATAGAAGAGACTTTGGACATTTAAATGGCATTGGAACATCAGAATGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAAGAGACTTTGGACATTTAAATGGCATTGGAACATCAGAATGA  789

seq1  TAGCACATAAAAGATAAGATACATTTTTGTAGGCAAATCAGAGCAAGCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACATAAAAGATAAGATACATTTTTGTAGGCAAATCAGAGCAAGCCA  839

seq1  AACACTTGCTAAGATAAAACGAACATTAAAAATTACCATAATTAATAATA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGCTAAGATAAAACGAACATTAAAAATTACCATAATTAATAATA  889

seq1  TTCTAGATGAAATGATAGAGATTAAATCAGATACCATCAAAATACTAATT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATGAAATGATAGAGATTAAATCAGATACCATCAAAATACTAATT  939

seq1  ATTAAGGCATATTTTGAAAATCTACATTTTAATAATTTGTAAAAAGCTAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGCATATTTTGAAAATCTACATTTTAATAATTTGTAAAAAGCTAG  989

seq1  AACACAGTGATTTCTAGACAGATGATCCATTTAACAGAGCTATAACAAGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGTGATTTCTAGACAGATGATCCATTTAACAGAGCTATAACAAGC  1039

seq1  AACTCAATTGAAGCAGCAGTAAAAAGTTTTTCAAATCAAATACCCCAGGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAATTGAAGCAGCAGTAAAAAGTTTTTCAAATCAAATACCCCAGGC  1089

seq1  ACATAAGGACTCACAATTGAATTC  1120
      ||||||||||||||||||||||||
seq2  ACATAAGGACTCACAATTGAATTC  1113