BAC Information

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BAC

Clone NameB6Ng01-244L15
Chromosome17 (Build37)
Map Location 21,629,195 - 21,629,590
singlet/doubletsinglet
Overlap geneZfp53
Upstream geneV1re5, EG627814, EG381065, EG224582, Fpr-rs3, EG433073, V1re2, V1re6, LOC100041976, V1re3, V1re1, V1re8, V1re7, V1re4, LOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51
Downstream geneLOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244L15.bB6Ng01-244L15.g
ACCGA053790GA053791
length1,203396
definitionB6Ng01-244L15.b B6Ng01-244L15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttcttgtatttttttttttgtcccaggattttctcgtc
ccggaatttctcgtcccggatttcagcaccaatccttaatagcgttctca
cgcgaccggccaggaaagacgcaacaaaccaaaatcttctgcggcaaaac
tttattgcttacatctttgggagccaggagggcaagcgcccagcgcccag
ccccaaaaacgaaagcccctttcaataatgaaaccgaaaccccttcccta
tttaggagagttatatttcgcctaggacgcatcactccctgattggctgc
agcccatggccgagctgacgttcacgggaaaggcagagtacaagtagtca
taaaatacccttggcacatgcgcagattatttgtttaccacttagaacac
aggatgtcagcgccatcttgtgacggcgaatgtgggggcggctcccaaca
ggagtccaccctctggagttctttacatatattggatattagtcccctat
cagatttaggataggtaaagatcctttcccaatctgttggtggccttttt
gtcttattgacggtgtcttttgccttgcagaagctttgcagtttcattag
gtcccatttgtcacttctcaatcttacagcacaagccattgctgttctat
tcagaaattttcccctgtgctcatatcttcgaggcttttccccactttct
cctctataactttcagtgactctggttttatgtggagtttcttgatctac
ttagatttggaccttaggacaaggagataggatgaatcaatttcgcattg
ttctacatgataacacccagtgtgccagcaggcttttggttggaaatgct
gtccatccttccactggaatggtttgtagcctccctttggtgtatatgaa
ttgacccaatgggtatggtggggttcatctccgggtcaatccaattaatt
tccagttgaggctaacctgtctagtcacctataccaggtaccatgccagt
ttttattccaattggctctgcttactgagctttagctacgcatgagtgca
tcgcggaggtacttatctcagaagagacgttttgctaatcctcataggta
ttg
gaattcagaatcaatcaaaacattagaaaggaaacaaatgataatataac
caataaataagcaaacgaattgaatcctccatgctcaacagcagctgaag
tggccaatatgtacctattaaaaagctctacattacaggctataagatcc
tgtaaattcaatatacagagattccaattctgtctagtcagtgtccacac
tcctgttcctaaacaataccaaatgtatcttttcagcaatttcttgaaat
gtaaatggataacatttcctaagctaaagatgtaaacagtattcaaaaaa
ttgaaagcggaaattaaaatatttttttcctaccaaaaaatccatttcat
atctaaagatacaagatactgagcaacaatatatatgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_21629195_21629590
seq2: B6Ng01-244L15.g_65_460 (reverse)

seq1  ACACACACACATATATATTGTTGCTCAGTATCTTGTATCTTTAGATATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACATATATATTGTTGCTCAGTATCTTGTATCTTTAGATATGA  50

seq1  AATGGATTTTTTGGTAGGAAAAAAATATTTTAATTTCCGCTTTCAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATTTTTTGGTAGGAAAAAAATATTTTAATTTCCGCTTTCAATTTT  100

seq1  TTGAATACTGTTTACATCTTTAGCTTAGGAAATGTTATCCATTTACATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATACTGTTTACATCTTTAGCTTAGGAAATGTTATCCATTTACATTT  150

seq1  CAAGAAATTGCTGAAAAGATACATTTGGTATTGTTTAGGAACAGGAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATTGCTGAAAAGATACATTTGGTATTGTTTAGGAACAGGAGTGT  200

seq1  GGACACTGACTAGACAGAATTGGAATCTCTGTATATTGAATTTACAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTGACTAGACAGAATTGGAATCTCTGTATATTGAATTTACAGGAT  250

seq1  CTTATAGCCTGTAATGTAGAGCTTTTTAATAGGTACATATTGGCCACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGCCTGTAATGTAGAGCTTTTTAATAGGTACATATTGGCCACTTC  300

seq1  AGCTGCTGTTGAGCATGGAGGATTCAATTCGTTTGCTTATTTATTGGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGTTGAGCATGGAGGATTCAATTCGTTTGCTTATTTATTGGTTA  350

seq1  TATTATCATTTGTTTCCTTTCTAATGTTTTGATTGATTCTGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCATTTGTTTCCTTTCTAATGTTTTGATTGATTCTGAATTC  396