BAC Information

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BAC

Clone NameB6Ng01-245G10
Chromosome17 (Build37)
Map Location 92,265,285 - 92,389,597
singlet/doubletdoublet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
Downstream geneEG640442, LOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245G10.bB6Ng01-245G10.g
ACCGA054295GA054296
length1,0681,082
definitionB6Ng01-245G10.b B6Ng01-245G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,265,285 - 92,266,348)(92,388,525 - 92,389,597)
sequence
gaattcagtttagatatgtatcctattttaaaattgatttcttttcttga
tgtttagtttttttcatttaaaagtttaatagctagaaggaatatctatc
ctcacaaaatcgattatttatggaaaaaatgcctagagattgatacaatg
ggattaccatatttttgttactatttggttatgatatcaggcatatcagt
attttgattaaaatttaaaaatcaatgtaaagttgaagctgttcaacata
tgataatctacttaatgatattgatagtaggaaaaatagatatgtgttat
atgaaaattctcttcacaactttaatgtaaattctaaactattataaaaa
tagttgattgtgaaacaagtaaatgaaagtataatacacatatcacatta
atataacacaaattaatgataatcagcatatgttatattgttaataaata
ttgcacacacacacacacacacacacacacacacacatatatatatatat
atatatatatatatatatatatatatatatactcagtatttccaatgtta
ttatttttcacagaaacctatgctttaaaaatagtacttgttttataaat
tggtagagatcattctcactaggggagtgataccaccttgagtcataact
atcatatccccccttcactcccattccagtattttttccttttacttctt
cactttacgtcccattcactgccactcttcctatcatcctgtcccacaat
ctttccccattttcctctgtgctactcctgtgagcaggtggtgaccccta
actatcccccaaccctggcacctttaagtgtctgcaggttaggcactccc
tcttccacagaggccagacagggcattctggctaagaagaacatacccca
catacaggcaacagtttgggggatagctcctgctccatgttgttcaggaa
ccaacaacatgaagacaaagctgatgcatctgctccattatgtgcaaaag
tattaaaggtccagaacataatgttcttttgctgtgattgagttgtctga
agagccccagagtcagtt

tgaagaaagctccttcagttgttgactcctcagaagctcacctagaaact
gcagagtctatgaattattatttgcagttaaattctagtatttcagtgta
tttgaccaggcaaaattgaaaattcccatggaaagtaggttaaaaactat
ttagtgcaacagcaaacatactttcattcacagtctgattttgtaaccaa
tcttgtaaaatatgagttctgatagtatcttatactttggagacattaaa
aaaatgttacatatgaactcaaaattgatgtgtatactggtaatcctaga
aatttagatactaagcagaacttttatgaattctgtcatcttgggccaca
taaacatgtcaacccaatcatggatacacagcagtactctgtttttaaaa
acacgacaatcaataaaagcaaagtgataaaatatgttctgcatttctat
gttacttgctaatatcagtgataatatcacttactggactatgccatttc
ttctacaatacttccatctaaaacacatctgctgtttgttctatttgccc
tctcccagtatggccttgtagggggtcatcacactgctcgtaaaaccctg
agctgtcaaaatgaaaaacagttaggttttgtctcaaaggcacagagaag
ccatagaattagacatcagtgttaaacaggtgctgggaaatgtctacgat
tcccaaaagtctacacaatgggatataggttcaaggtaatatgtcaactc
agaaatgtccaaggagagttgggctgaagaagagtcttatgggaatattt
cagaaatattttctttaaggaacacaaattgaaaatataatacactattt
cttatccactaaaatgatgatactaaaaaaataatagttacattactgga
ttctgtgcagaattatagattactctaagttttttatgaataacagaatt
attttttcatggttcttagagattagtgatcttcatagtaagaatactac
catttggtcttggtgagaaattttttggagttgatttttatgtcaagaaa
aaacaaaggcatgatgtgacagtctagtcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92265285_92266348
seq2: B6Ng01-245G10.b_46_1113

seq1  GAATTCAGTTTAGATATGTATCCTATTTTAAAATTGATTTCTTTTCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTAGATATGTATCCTATTTTAAAATTGATTTCTTTTCTTGA  50

seq1  TGTTTAGTTTTTTTCATTTAAAAGTTTAATAGCTAGAAGGAATATCTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGTTTTTTTCATTTAAAAGTTTAATAGCTAGAAGGAATATCTATC  100

seq1  CTCACAAAATCGATTATTTATGGAAAAAATGCCTAGAGATTGATACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAAATCGATTATTTATGGAAAAAATGCCTAGAGATTGATACAATG  150

seq1  GGATTACCATATTTTTGTTACTATTTGGTTATGATATCAGGCATATCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACCATATTTTTGTTACTATTTGGTTATGATATCAGGCATATCAGT  200

seq1  ATTTTGATTAAAATTTAAAAATCAATGTAAAGTTGAAGCTGTTCAACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATTAAAATTTAAAAATCAATGTAAAGTTGAAGCTGTTCAACATA  250

seq1  TGATAATCTACTTAATGATATTGATAGTAGGAAAAATAGATATGTGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCTACTTAATGATATTGATAGTAGGAAAAATAGATATGTGTTAT  300

seq1  ATGAAAATTCTCTTCACAACTTTAATGTAAATTCTAAACTATTATAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATTCTCTTCACAACTTTAATGTAAATTCTAAACTATTATAAAAA  350

seq1  TAGTTGATTGTGAAACAAGTAAATGAAAGTATAATACACATATCACATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGATTGTGAAACAAGTAAATGAAAGTATAATACACATATCACATTA  400

seq1  ATATAACACAAATTAATGATAATCAGCATATGTTATATTGTTAATAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACACAAATTAATGATAATCAGCATATGTTATATTGTTAATAAATA  450

seq1  TTGCACACACACACACACACACACACACACACACACATATATATATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACACACACACACACACACACACACACACACACATATATATATATAT  500

seq1  ATATATATATATATATATATATATATATATACTCAGTATTTCCAATGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATACTCAGTATTTCCAATGTTA  550

seq1  TTATTTTTCACAGAAACCTATGCTTTAAAAATAGTACTTGTTTTATAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTCACAGAAACCTATGCTTTAAAAATAGTACTTGTTTTATAAAT  600

seq1  TGGTAGAGATCATTCTCACTAGGGGAGTGATACCACCTTGAGTCATAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGATCATTCTCACTAGGGGAGTGATACCACCTTGAGTCATAACT  650

seq1  ATCATATCCCCCCTTCACTCCCATTCCAGTATTTTTTCCTTTTACTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATCCCCCCTTCACTCCCATTCCAGTATTTTTTCCTTTTACTTCTT  700

seq1  CACTTTACGTCCCATTCACTGCCACTCTTCCTATCATCCTGTCCCACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTACGTCCCATTCACTGCCACTCTTCCTATCATCCTGTCCCACAAT  750

seq1  CTTTCCCCATTTTCCTCTGTGCTACTCCTGTGAGCAGGTGGTGACCCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCCATTTTCCTCTGTGCTACTCCTGTGAGCAGGTGGTGACCCCTA  800

seq1  ACTATCCCCCAACCCTGGCACC-TTAAGTGTCTGCAGGTTAGGCACTCCC  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACTATCCCCCAACCCTGGCACCTTTAAGTGTCTGCAGGTTAGGCACTCCC  850

seq1  TCTTCCACAGAGGCCAGACAGGGCATTCTGGCT-AGAAGAACATAACCCA  898
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  TCTTCCACAGAGGCCAGACAGGGCATTCTGGCTAAGAAGAACATACCCCA  900

seq1  CATACAGGCAACAGTTTGGGGGATAGCTCCTGCTCCA-GTTGTTCAGGAA  947
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CATACAGGCAACAGTTTGGGGGATAGCTCCTGCTCCATGTTGTTCAGGAA  950

seq1  CCAACAACATGAAGACAAAGCTG-TGCATCTGCTCCA-TATGTGCAAAGG  995
      ||||||||||||||||||||||| ||||||||||||| |||||||||| |
seq2  CCAACAACATGAAGACAAAGCTGATGCATCTGCTCCATTATGTGCAAAAG  1000

seq1  TATT-AAGGTCCAGAACATAAATGTTCTTTGGTTGGTGATTGAG-TGTCT  1043
      |||| |||||||||||||| |||||||||| | | ||||||||| |||||
seq2  TATTAAAGGTCCAGAACAT-AATGTTCTTTTGCT-GTGATTGAGTTGTCT  1048

seq1  G-AGAGCCCCAAGAGTCCAGTT  1064
      | |||||||| ||||| |||||
seq2  GAAGAGCCCC-AGAGT-CAGTT  1068


seq1: chr17_92388525_92389597
seq2: B6Ng01-245G10.g_79_1160 (reverse)

seq1  TCTGACTAGACTGTCACATCATGCTTTTGTTTT---CTGACAT-AAAATC  46
      |||||||||||||||||||||||| ||||||||    |||||| ||||||
seq2  TCTGACTAGACTGTCACATCATGCCTTTGTTTTTTCTTGACATAAAAATC  50

seq1  -ACT-CAAAAAATTTCTCACC-AGACCAAATGGTAGTATTCTTACTATGA  93
       ||| |||||||||||||||| ||||||||||||||||||||||||||||
seq2  AACTCCAAAAAATTTCTCACCAAGACCAAATGGTAGTATTCTTACTATGA  100

seq1  AGATCACT-ATCTCT-AGAACCATGAAAAATAATTTCTGTTATTCATAAA  141
      |||||||| |||||| ||||||||||||||  | ||||||||||||||||
seq2  AGATCACTAATCTCTAAGAACCATGAAAAAATAATTCTGTTATTCATAAA  150

seq1  AAACTTAGAGTAATCTATAATTCTGCACAGAATCCAGTAATGTAACTATT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGAGTAATCTATAATTCTGCACAGAATCCAGTAATGTAACTATT  200

seq1  ATTTTTTTAGTATCATCATTTTAGTGGATAAGAAATAGTGTATTATATTT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAGTATCATCATTTTAGTGGATAAGAAATAGTGTATTATATTT  250

seq1  TCAATTTGTGTTCCTTAAAGAAAATATTTCTGAAATATTCCCATAAGACT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTGTGTTCCTTAAAGAAAATATTTCTGAAATATTCCCATAAGACT  300

seq1  CTTCTTCAGCCCAACTCTCCTTGGACATTTCTGAGTTGACATATTACCTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAGCCCAACTCTCCTTGGACATTTCTGAGTTGACATATTACCTT  350

seq1  GAACCTATATCCCATTGTGTAGACTTTTGGGAATCGTAGACATTTCCCAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTATATCCCATTGTGTAGACTTTTGGGAATCGTAGACATTTCCCAG  400

seq1  CACCTGTTTAACACTGATGTCTAATTCTATGGCTTCTCTGTGCCTTTGAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTTTAACACTGATGTCTAATTCTATGGCTTCTCTGTGCCTTTGAG  450

seq1  ACAAAACCTAACTGTTTTTCATTTTGACAGCTCAGGGTTTTACGAGCAGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCTAACTGTTTTTCATTTTGACAGCTCAGGGTTTTACGAGCAGT  500

seq1  GTGATGACCCCCTACAAGGCCATACTGGGAGAGGGCAAATAGAACAAACA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGACCCCCTACAAGGCCATACTGGGAGAGGGCAAATAGAACAAACA  550

seq1  GCAGATGTGTTTTAGATGGAAGTATTGTAGAAGAAATGGCATAGTCCAGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGTGTTTTAGATGGAAGTATTGTAGAAGAAATGGCATAGTCCAGT  600

seq1  AAGTGATATTATCACTGATATTAGCAAGTAACATAGAAATGCAGAACATA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATATTATCACTGATATTAGCAAGTAACATAGAAATGCAGAACATA  650

seq1  TTTTATCACTTTGCTTTTATTGATTGTCGTGTTTTTAAAAACAGAGTACT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCACTTTGCTTTTATTGATTGTCGTGTTTTTAAAAACAGAGTACT  700

seq1  GCTGTGTATCCATGATTGGGTTGACATGTTTATGTGGCCCAAGATGACAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTATCCATGATTGGGTTGACATGTTTATGTGGCCCAAGATGACAG  750

seq1  AATTCATAAAAGTTCTGCTTAGTATCTAAATTTCTAGGATTACCAGTATA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATAAAAGTTCTGCTTAGTATCTAAATTTCTAGGATTACCAGTATA  800

seq1  CACATCAATTTTGAGTTCATATGTAACATTTTTTTAATGTCTCCAAAGTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAATTTTGAGTTCATATGTAACATTTTTTTAATGTCTCCAAAGTA  850

seq1  TAAGATACTATCAGAACTCATATTTTACAAGATTGGTTACAAAATCAGAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATACTATCAGAACTCATATTTTACAAGATTGGTTACAAAATCAGAC  900

seq1  TGTGAATGAAAGTATGTTTGCTGTTGCACTAAATAGTTTTTAACCTACTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATGAAAGTATGTTTGCTGTTGCACTAAATAGTTTTTAACCTACTT  950

seq1  TCCATGGGAATTTTCAATTTTGCCTGGTCAAATACACTGAAATACTAGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGAATTTTCAATTTTGCCTGGTCAAATACACTGAAATACTAGAA  1000

seq1  TTTAACTGCAAATAATAATTCATAGACTCTGCAGTTTCTAGGTGAGCTTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGCAAATAATAATTCATAGACTCTGCAGTTTCTAGGTGAGCTTC  1050

seq1  TGAGGAGTCAACAACTGAAGGAGCTTTCTTCA  1073
      ||||||||||||||||||||||||||||||||
seq2  TGAGGAGTCAACAACTGAAGGAGCTTTCTTCA  1082


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