BAC Information

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BAC

Clone NameB6Ng01-246B05
Chromosome17 (Build37)
Map Location 32,757,873 - 32,903,950
singlet/doubletdoublet
Overlap geneLOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik
Upstream geneCbs, LOC623242, U2af1, Cryaa, Snf1lk, Hsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, Brd4, LOC100043434, LOC100043433, Akap8, Akap8l, Wiz, A430107D22Rik, Pglyrp2, 4732474A20Rik, EG208285, Cyp4f16, LOC667178
Downstream geneZfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10, Myo1f, Zfp414, Pram1, Hnrpm, March2, Rab11b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246B05.bB6Ng01-246B05.g
ACCGA054794GA054795
length9911,129
definitionB6Ng01-246B05.b B6Ng01-246B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,903,391 - 32,903,950)(32,757,873 - 32,758,976)
sequence
ggaattcaacagtgaatttgtcaagtcctgtgctttccttgtggagacaa
ttcatttctagcttgaagatgtttccctttttcactgttcacattccctt
gacttttcatctgttttgttgttgagaattttatgcatgcacataatgca
ttttgatcaagcccacacactccccattccttctaatttttccatccctc
accacttttgttctcaatttcatttgttctcttccatgtttaacctacag
tctccttaatgcttccagtatatacatgggtgcagtgccatcttctttgg
catgactagcctctcccttacccagcaggcatcagttgccaatagctact
caggagtgggcctttctgcacacctcccacctccatgctgtcatttttgt
ctcgcttgtatttccagtcacagctgttgtcagttagtaggtgcaactgt
cctgttgtatctagcacacactgtttggctgtaataattcactctggctc
tcacattctttcggctccctcatctgtaatgatccctggtcctctgagag
aagaaatgtgatgtgtgtagatgctccatttagaactgagccctccagaa
tcacttattttctacatgttgaccagttgtgaatctattcattataatct
actgcaaaaacagtaataaaacccatcttctgtgatgaagatacattttt
ctatgggtataaagataccctttaacagaataatagtaggttagtagaaa
gttctccacattaatgctgccagacttgggttttatcttgtgggttgtgt
gaaataggcctgaaatccagtcacagtggttggttattcttgccgtactc
atggctgtgtcttgtcagactgatctgtaattgtagctcagaggcttctc
agctgggtaaacacagcatcatctagcactatgaaagctagccagtaggc
tgaactctctaggtcagtataagctatgattctttatactc
gaattctgcatgctgcacttccaccagtgagatgtgcagagatccctggg
agatgctcagggaacatcctgaacaccatcctggcaccagtacttcttcc
ttcacgcttttatcagcagactgttgcccttggaagggcccagagtcacc
tttgcccttgactcagaggtgctgcatcctaaatgcaacctgcctgtgtg
tgttgccctgagtctcccctccactccagtctggtcctgcccaacttgat
ttggcctgatgcccaagcagggaggaagtggctgagcctgggagggattt
gattggttcagtccagcctaacccagcctcccacacagctccctgaagtt
aggaagcaggggataaatgtttttcacaggagtggggaaaaggtcttaga
ggatcagcagctcctgagataaggtaccgacttcggctctgaggcaagag
agggtcctgactctgatcaggatgggtttatcagcgttgggatggttcca
tggagacaactggcacaagtgaccctgggttcctgcataaccatttgtgc
ttcaggcagagccatcccagactttcaacagctcttgtctgtgtgttccc
tgccttcttctctctctctcattctgcctcttcctgtatctccctcccct
tccctgctctactccctgctctactctatagtctctgcccatgctcaaaa
ttctgaagttttccaggttcctcttccaaacctcagaatttcctcctgtg
tctgtatgctcagcaggatgctgcggctaagtgtgtctgggctgggacct
gggctctgtggtgaccttgtcatggcatcttctgctgcttggaagcggca
tcttggattttggccagaatcccttgcctggacttactcattctgtgaga
aactgcttccgcctcagatgttttccctcaatcctccctaaaaagaaaac
ttggtttttgggtccacttggggcatgatgagttatggcggcagaatagg
cctcaagtatacgggggtgtatggtgttcctagaaagttaaggaaggtct
ggattcctgtaagcaagggagaagcataagtaaggtaagtggccacttct
cctccatcacaacacacacattacattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_32903391_32903950
seq2: B6Ng01-246B05.b_47_606 (reverse)

seq1  TCACATTTCTTCTCTCAGAGGACCAGGGATCATTACAGATGAGGGAGCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTCTTCTCTCAGAGGACCAGGGATCATTACAGATGAGGGAGCCG  50

seq1  AAAGAATGTGAGAGCCAGAGTGAATTATTACAGCCAAACAGTGTGTGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGTGAGAGCCAGAGTGAATTATTACAGCCAAACAGTGTGTGCTA  100

seq1  GATACAACAGGACAGTTGCACCTACTAACTGACAACAGCTGTGACTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAACAGGACAGTTGCACCTACTAACTGACAACAGCTGTGACTGGAA  150

seq1  ATACAAGCGAGACAAAAATGACAGCATGGAGGTGGGAGGTGTGCAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGCGAGACAAAAATGACAGCATGGAGGTGGGAGGTGTGCAGAAAG  200

seq1  GCCCACTCCTGAGTAGCTATTGGCAACTGATGCCTGCTGGGTAAGGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTCCTGAGTAGCTATTGGCAACTGATGCCTGCTGGGTAAGGGAGA  250

seq1  GGCTAGTCATGCCAAAGAAGATGGCACTGCACCCATGTATATACTGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGTCATGCCAAAGAAGATGGCACTGCACCCATGTATATACTGGAAG  300

seq1  CATTAAGGAGACTGTAGGTTAAACATGGAAGAGAACAAATGAAATTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGGAGACTGTAGGTTAAACATGGAAGAGAACAAATGAAATTGAGA  350

seq1  ACAAAAGTGGTGAGGGATGGAAAAATTAGAAGGAATGGGGAGTGTGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGTGGTGAGGGATGGAAAAATTAGAAGGAATGGGGAGTGTGTGGG  400

seq1  CTTGATCAAAATGCATTATGTGCATGCATAAAATTCTCAACAACAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCAAAATGCATTATGTGCATGCATAAAATTCTCAACAACAAAACA  450

seq1  GATGAAAAGTCAAGGGAATGTGAACAGTGAAAAAGGGAAACATCTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAAGTCAAGGGAATGTGAACAGTGAAAAAGGGAAACATCTTCAAG  500

seq1  CTAGAAATGAATTGTCTCCACAAGGAAAGCACAGGACTTGACAAATTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATGAATTGTCTCCACAAGGAAAGCACAGGACTTGACAAATTCAC  550

seq1  TGTTGAATTC  560
      ||||||||||
seq2  TGTTGAATTC  560

seq1: chr17_32757873_32758976
seq2: B6Ng01-246B05.g_72_1200

seq1  GAATTCTGCATGCTGCACTTCCACCAGTGAGATGTGCAGAGATCCCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATGCTGCACTTCCACCAGTGAGATGTGCAGAGATCCCTGGG  50

seq1  AGATGCTCAGGGAACATCCTGAACACCATCCTGGCACCAGTACTTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCAGGGAACATCCTGAACACCATCCTGGCACCAGTACTTCTTCC  100

seq1  TTCACGCTTTTATCAGCAGACTGTTGCCCTTGGAAGGGCCCAGAGTCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGCTTTTATCAGCAGACTGTTGCCCTTGGAAGGGCCCAGAGTCACC  150

seq1  TTTGCCCTTGACTCAGAGGTGCTGCATCCTAAATGCAACCTGCCTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTTGACTCAGAGGTGCTGCATCCTAAATGCAACCTGCCTGTGTG  200

seq1  TGTTGCCCTGAGTCTCCCCTCCACTCCAGTCTGGTCCTGCCCAACTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCCTGAGTCTCCCCTCCACTCCAGTCTGGTCCTGCCCAACTTGAT  250

seq1  TTGGCCTGATGCCCAAGCAGGGAGGAAGTGGCTGAGCCTGGGAGGGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTGATGCCCAAGCAGGGAGGAAGTGGCTGAGCCTGGGAGGGATTT  300

seq1  GATTGGTTCAGTCCAGCCTAACCCAGCCTCCCACACAGCTCCCTGAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTTCAGTCCAGCCTAACCCAGCCTCCCACACAGCTCCCTGAAGTT  350

seq1  AGGAAGCAGGGGATAAATGTTTTTCACAGGAGTGGGGAAAAGGTCTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGGGGATAAATGTTTTTCACAGGAGTGGGGAAAAGGTCTTAGA  400

seq1  GGATCAGCAGCTCCTGAGATAAGGTACCGACTTCGGCTCTGAGGCAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGCAGCTCCTGAGATAAGGTACCGACTTCGGCTCTGAGGCAAGAG  450

seq1  AGGGTCCTGACTCTGATCAGGATGGGTTTATCAGCGTTGGGATGGTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCTGACTCTGATCAGGATGGGTTTATCAGCGTTGGGATGGTTCCA  500

seq1  TGGAGACAACTGGCACAAGTGACCCTGGGTTCCTGCATAACCATTTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAACTGGCACAAGTGACCCTGGGTTCCTGCATAACCATTTGTGC  550

seq1  TTCAGGCAGAGCCATCCCAGACTTTCAACAGCTCTTGTCTGTGTGTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCAGAGCCATCCCAGACTTTCAACAGCTCTTGTCTGTGTGTTCCC  600

seq1  TGCCTTCTTCTCTCTCTCTCATTCTGCCTCTTCCTGTATCTCCCTCCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTTCTCTCTCTCTCATTCTGCCTCTTCCTGTATCTCCCTCCCCT  650

seq1  TCCCTGCTCTACTCCCTGCTCTACTCTATAGTCTCTGCCCATGCTCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTCTACTCCCTGCTCTACTCTATAGTCTCTGCCCATGCTCAAAA  700

seq1  TTCTGAAGTTTTCCAGGTTCCTCTTCCAAACCTCAGAATTTCCTCCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTTTTCCAGGTTCCTCTTCCAAACCTCAGAATTTCCTCCTGTG  750

seq1  TCTGTATGCTCAGCAGGATGCTGCGGCTAAGTGTGTCTGGGCT-GGACCT  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTGTATGCTCAGCAGGATGCTGCGGCTAAGTGTGTCTGGGCTGGGACCT  800

seq1  GGGCTCTGTGGTGACCTTGTCATGGCATCTTCTGCTGCTTGG-AGCGGCA  848
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGCTCTGTGGTGACCTTGTCATGGCATCTTCTGCTGCTTGGAAGCGGCA  850

seq1  TCTTGGATTTTGGCCAGAAT-CCTTGCCTGGACTTACTCATTCTGTGAG-  896
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  TCTTGGATTTTGGCCAGAATCCCTTGCCTGGACTTACTCATTCTGTGAGA  900

seq1  AACTGCTCCCGCCTCAGATG-TTTCCCTC-AGCCTCC--TAAAAGAAA--  940
      ||||||| |||||||||||| |||||||| | |||||   ||||||||  
seq2  AACTGCTTCCGCCTCAGATGTTTTCCCTCAATCCTCCCTAAAAAGAAAAC  950

seq1  CTGGTTTTTGGGT-CACTT-GGGCATGGTGAG-TATGGCGGCAG-ATAGG  986
       |||||||||||| ||||| ||||||| |||| ||||||||||| |||||
seq2  TTGGTTTTTGGGTCCACTTGGGGCATGATGAGTTATGGCGGCAGAATAGG  1000

seq1  -CTCAGGTAT--CGGGGTGTAT-GTGTTCCCTAG-AAGTTAGGAAAGGTC  1031
       |||| ||||   ||||||||| ||||| ||||| |||||| | ||||||
seq2  CCTCAAGTATACGGGGGTGTATGGTGTT-CCTAGAAAGTTAAGGAAGGTC  1049

seq1  TGGA-TCCTGT-AGC-AGGGAGAAGCAT-AGTAAGTTAGTTGGGCCAC-T  1076
      |||| |||||| ||| |||||||||||| |||||| ||  | |||||| |
seq2  TGGATTCCTGTAAGCAAGGGAGAAGCATAAGTAAGGTAAGT-GGCCACTT  1098

seq1  CTCCT-CATCACAACAC-CACATT-CATTTA  1104
      ||||| ||||||||||| |||||| ||||||
seq2  CTCCTCCATCACAACACACACATTACATTTA  1129