BAC Information

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BAC

Clone NameB6Ng01-247G02
Chromosome17 (Build37)
Map Location 41,026,687 - 41,027,767
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC634967, Pgk2, Crisp3, Crisp1, LOC668229, LOC100043756, EG433107, EG619517, Crisp2, Rhag, 9130008F23Rik
Downstream geneEG435528, Cenpq, Mut, Ldha-ps3, LOC627577
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247G02.bB6Ng01-247G02.g
ACCGA055729GA055730
length1,0891,171
definitionB6Ng01-247G02.b B6Ng01-247G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatagcatcttggcaaaacattcatgttgcaggatatttgatca
cactgtgaaccccaagattatatactggaaaaaacttgtttctagttgca
gtgtggctcagccctagcacatccctttaatctgagatctttctgtttat
tgtgaaagattgaatacagtcagccatcggtcaagaagcagagcaagcaa
ccagttgatagggagtcaacataggaaaaccatagagagtgagaggaagt
caggaggtcaggtagagagatacccaggaaggagaaaggtgtgacattcg
gttggaagggtttttaaaactgtgagaatgggttttttccttatgggaag
ttggttaagaaggaaggtcagctgggtgctttctctgcctctctgagcaa
caggctttcaccacagcatctgtcccctgagtctttggtaaaatctgaac
catgcaaaggctggggggcatacagaagggcctgtttttcttctcacagt
cagggtgctattagtcacaagaacattagttataaagggaagtgtgatta
agctctctgttaaaattgtttgtagtcttcaagattattcataatgagat
taggttgtatttatactgagtcatctaatattttctcagacttatacttt
gtgctagttgatattattcattagattcctgtttgggggatttgatctac
catatgtagtaatttggttggatgaaattagatatttttatgtctggcct
cagagtatttagctgttaggtctaaagaggaagcaaagagaaaaaaggaa
aaaagcaagtgagcttttaaatatttcattaattattaggtatgtagggg
agaagaagttattgagtcaaagaaaagacaataaaattgcagtcttgtta
acctttgagataagaaagaggaaccagagaaaagagttgagagaataaaa
gagcttggcttatgatggcaccaagcctttctattttagagggggtttct
ctgtggtttttgaggccagcctgatctacacagcaagctctgggatatcc
agtactatataagagaatccttgtgtcaggaaatgaaat

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatttaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactcttgaaattagtcttgcggttcctca
gaaaattggacatagtactaccctaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatactccactat
cttcatagcagccttatttataatagccagaagctgaaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggattcccaagatataagatacaatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccacaatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagacaatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatagatggatcacagggctcccaa
tgtaggagctagagaaagaacccaaaggagctaaagggatctgcaaccct
ataggtggaacaacattatgaactatcagtaccccggagctcttgactct
tagctgcatatgtatcaaaaggatgacttagtcggcattcactgaaagag
aggcccattgggaacttgcaactgtatatgctccagtacaggcatgccag
ggccacaaatgggcgagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_41026687_41027767
seq2: B6Ng01-247G02.b_45_1133 (reverse)

seq1  ATTTC-TTTCTTGACAC-AGGA-TCTC-TATATAGTACTGGATATCCAGA  46
      ||||| |||| |||||| |||| |||| |||||||||||||||||||   
seq2  ATTTCATTTCCTGACACAAGGATTCTCTTATATAGTACTGGATATCCCAG  50

seq1  AGCTTGCTGTGTAGATCAGGCTGGCCTC-AAAACCACAGAGAAACCCCCT  95
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGCTTGCTGTGTAGATCAGGCTGGCCTCAAAAACCACAGAGAAACCCCCT  100

seq1  CTAAAATAG-AAGGCTT-GTGCCATCAT-AGCC-AGCTCTTTTATTCTCT  141
      ||||||||| ||||||| |||||||||| |||| ||||||||||||||||
seq2  CTAAAATAGAAAGGCTTGGTGCCATCATAAGCCAAGCTCTTTTATTCTCT  150

seq1  CAACTCTTTTTCTCTGGTTCCTCTTTCTTATCTCAAAGGTTAACAAGACT  191
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTC-TTTTCTCTGGTTCCTCTTTCTTATCTCAAAGGTTAACAAGACT  199

seq1  GCAATTTTATTGTCTTTTCTTTGACTCAATAACTTCTTCTCCCCTACATA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTTATTGTCTTTTCTTTGACTCAATAACTTCTTCTCCCCTACATA  249

seq1  CCTAATAATTAATGAAATATTTAAAAGCTCACTTGCTTTTTTCCTTTTTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAATTAATGAAATATTTAAAAGCTCACTTGCTTTTTTCCTTTTTT  299

seq1  CTCTTTGCTTCCTCTTTAGACCTAACAGCTAAATACTCTGAGGCCAGACA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGCTTCCTCTTTAGACCTAACAGCTAAATACTCTGAGGCCAGACA  349

seq1  TAAAAATATCTAATTTCATCCAACCAAATTACTACATATGGTAGATCAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATCTAATTTCATCCAACCAAATTACTACATATGGTAGATCAAA  399

seq1  TCCCCCAAACAGGAATCTAATGAATAATATCAACTAGCACAAAGTATAAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAAACAGGAATCTAATGAATAATATCAACTAGCACAAAGTATAAG  449

seq1  TCTGAGAAAATATTAGATGACTCAGTATAAATACAACCTAATCTCATTAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAAATATTAGATGACTCAGTATAAATACAACCTAATCTCATTAT  499

seq1  GAATAATCTTGAAGACTACAAACAATTTTAACAGAGAGCTTAATCACACT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATCTTGAAGACTACAAACAATTTTAACAGAGAGCTTAATCACACT  549

seq1  TCCCTTTATAACTAATGTTCTTGTGACTAATAGCACCCTGACTGTGAGAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTATAACTAATGTTCTTGTGACTAATAGCACCCTGACTGTGAGAA  599

seq1  GAAAAACAGGCCCTTCTGTATGCCCCCCAGCCTTTGCATGGTTCAGATTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAGGCCCTTCTGTATGCCCCCCAGCCTTTGCATGGTTCAGATTT  649

seq1  TACCAAAGACTCAGGGGACAGATGCTGTGGTGAAAGCCTGTTGCTCAGAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAGACTCAGGGGACAGATGCTGTGGTGAAAGCCTGTTGCTCAGAG  699

seq1  AGGCAGAGAAAGCACCCAGCTGACCTTCCTTCTTAACCAACTTCCCATAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGAAAGCACCCAGCTGACCTTCCTTCTTAACCAACTTCCCATAA  749

seq1  GGAAAAAACCCATTCTCACAGTTTTAAAAACCCTTCCAACCGAATGTCAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAACCCATTCTCACAGTTTTAAAAACCCTTCCAACCGAATGTCAC  799

seq1  ACCTTTCTCCTTCCTGGGTATCTCTCTACCTGACCTCCTGACTTCCTCTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTCCTTCCTGGGTATCTCTCTACCTGACCTCCTGACTTCCTCTC  849

seq1  ACTCTCTATGGTTTTCCTATGTTGACTCCCTATCAACTGGTTGCTTGCTC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTATGGTTTTCCTATGTTGACTCCCTATCAACTGGTTGCTTGCTC  899

seq1  TGCTTCTTGACCGATGGCTGACTGTATTCAATCTTTCACAATAAACAGAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTGACCGATGGCTGACTGTATTCAATCTTTCACAATAAACAGAA  949

seq1  AGATCTCAGATTAAAGGGATGTGCTAGGGCTGAGCCACACTGCAACTAGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCAGATTAAAGGGATGTGCTAGGGCTGAGCCACACTGCAACTAGA  999

seq1  AACAAGTTTTTTCCAGTATATAATCTTGGGGTTCACAGTGTGATCAAATA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTTTTTCCAGTATATAATCTTGGGGTTCACAGTGTGATCAAATA  1049

seq1  TCCTGCAACATGAATGTTTTGCCAAGATGCTATGGAATTC  1081
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAACATGAATGTTTTGCCAAGATGCTATGGAATTC  1089


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