BAC Information

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BAC

Clone NameB6Ng01-247L16
Chromosome17 (Build37)
Map Location 41,996,529 - 41,997,246
singlet/doubletsinglet
Overlap genenone
Upstream gene9130008F23Rik, EG435528, Cenpq, Mut, Ldha-ps3, LOC627577
Downstream geneLOC627626, Opn5, Gpr115, Gpr111, EG546797, Cd2ap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247L16.bB6Ng01-247L16.g
ACCGA055989GA055990
length1,0491,184
definitionB6Ng01-247L16.b B6Ng01-247L16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgactatagagatattcgtatctaccccaacttcatagaatt
cttgagaaagaatgtaaaccctgtgggctattaaaacttttcagtttctt
ttcctaagtgaaaatgtacctaatatctgtgatatattaattttcccttt
tcactgttttagtttttggcaaaactaaggtctatactgaggacttcctg
tttacttagtaagcattcttcctctttatatatatactttttattaggta
ttttcctcatttacatttccaatgctatccaaaatgtcccccatagcctc
ccaccaactcccctaccaaccccctcccatttttggccttggcttcccct
gtactggggcatataaagtttgcaagtccaatgggcctctctttccagtg
atggcggactaggccatcttttgatatatatgcagctagagtcaagagct
ccggggtactggttagttcatagtgttgttctacctagagggttgcagat
cccttcagctccttgggtactatctctagctcctccattgggggccctgt
gatccatccaatagctgactgtgagcatccacttccatgtttgctaggcc
ccagcatactctcacaagacacagctatatctgggtcctttcagcaaaat
cttgctagtatatgcaatggtgtcagcgtttggaagctaatcatgggatg
taaacctggatatgcaggctctagatggtccatccttttgacacagctcc
aagctttgtctctgtaactccttccatgggtgtttggtcccaattccatg
aagggggaaattgtccacaccttggtcttcgttcctctttagtttcatgc
atttagcaaattgtatcttatatcttgggtatcctaagtttctgggctaa
tatccacttatcagtgagtacatattgtatgagatcctttgtgattaggt
tacctcactcagatgataccctccaggtccatttttgcctaggaatttca
taaatttcgttctttaatagctgaagagtactcatgtgtaatgtacaca

gaattctgtaggcttcttgtatgatcatgggcatgtctttctttaggtat
gggaagttttcttctataattttgttgaagatatttgctgtccctttaag
tttgaaaatcttcattctcatcaactcctattatccataggtttggtctt
ctcattgtgtcctggatttcctggatgttttgagttaggatccttttgca
ttttgtattttcttttattgttgtgctgatgttctttatggaatcttctg
cacctgagattctcttttccatctcttgtattctgttgctgatgctcgca
tctatggttccagatttatttcctagggtttctatctccagcgttgcctc
gctttgggttttctttattgtgtctacttccgtttttagttctagtatgg
ttttgttcatttccatcacctgtttggttgtgtttcctgtttttctttaa
ggacttataactctttagcagtgttctcctgtatttctttaagtgagtta
ttaaagtccttcttgatgtcctctaccatcatcatgagatatgcttttaa
atccgtgtctagcttttcggttgtgttggggtgcccaggactaggtgggg
tgggagtgctgcgttctgatggtggtgagtggtcttgatttctgttagta
ggattcttaaatttgcctttcgccatctggtattctctggagctagttgt
tatagttgtctctggttagagcttgttcctcaggtgattatgttagcctc
tatcagcagacctgggagactggctctatccttagtttcagtggtcagtg
tactctctgcaggcaagctctcctcttgaagggaaggtgcccagataggt
gtttgaacctgcctcctggcagaagttgtgttccacacaccagcagtctt
aagatcccatggaggatcctgtgaggaccttggggtgtccagaaacttct
gcgcacaagaactctgctgctagagtgaaccggaaggaacttgtgctcct
gctcagctgggttatctgcctcccctagttaatgcagtcttaggtcccgg
agggatttgattggagcgaatggttgagtccactccactagaggttctta
gaatctgtgggatccgtgttctcatctctgagccagcaccctgtgctcgg
aagtgggctcaaaagtgcgcggatcatgactact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_41996529_41997246
seq2: B6Ng01-247L16.b_46_763

seq1  GAATTCTATGACTATAGAGATATTCGTATCTACCCCAACTTCATAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGACTATAGAGATATTCGTATCTACCCCAACTTCATAGAATT  50

seq1  CTTGAGAAAGAATGTAAACCCTGTGGGCTATTAAAACTTTTCAGTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAAAGAATGTAAACCCTGTGGGCTATTAAAACTTTTCAGTTTCTT  100

seq1  TTCCTAAGTGAAAATGTACCTAATATCTGTGATATATTAATTTTCCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAGTGAAAATGTACCTAATATCTGTGATATATTAATTTTCCCTTT  150

seq1  TCACTGTTTTAGTTTTTGGCAAAACTAAGGTCTATACTGAGGACTTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTTTAGTTTTTGGCAAAACTAAGGTCTATACTGAGGACTTCCTG  200

seq1  TTTACTTAGTAAGCATTCTTCCTCTTTATATATATACTTTTTATTAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAGTAAGCATTCTTCCTCTTTATATATATACTTTTTATTAGGTA  250

seq1  TTTTCCTCATTTACATTTCCAATGCTATCCAAAATGTCCCCCATAGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCATTTACATTTCCAATGCTATCCAAAATGTCCCCCATAGCCTC  300

seq1  CCACCAACTCCCCTACCAACCCCCTCCCATTTTTGGCCTTGGCTTCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAACTCCCCTACCAACCCCCTCCCATTTTTGGCCTTGGCTTCCCCT  350

seq1  GTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTG  400

seq1  ATGGCGGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAAGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCAAGAGCT  450

seq1  CCGGGGTACTGGTTAGTTCATAGTGTTGTTCTACCTAGAGGGTTGCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGTACTGGTTAGTTCATAGTGTTGTTCTACCTAGAGGGTTGCAGAT  500

seq1  CCCTTCAGCTCCTTGGGTACTATCTCTAGCTCCTCCATTGGGGGCCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAGCTCCTTGGGTACTATCTCTAGCTCCTCCATTGGGGGCCCTGT  550

seq1  GATCCATCCAATAGCTGACTGTGAGCATCCACTTCCATGTTTGCTAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATCCAATAGCTGACTGTGAGCATCCACTTCCATGTTTGCTAGGCC  600

seq1  CCAGCATACTCTCACAAGACACAGCTATATCTGGGTCCTTTCAGCAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATACTCTCACAAGACACAGCTATATCTGGGTCCTTTCAGCAAAAT  650

seq1  CTTGCTAGTATATGCAATGGTGTCAGCGTTTGGAAGCTAATCATGGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAGTATATGCAATGGTGTCAGCGTTTGGAAGCTAATCATGGGATG  700

seq1  TAAACCTGGATATGCAGG  718
      ||||||||||||||||||
seq2  TAAACCTGGATATGCAGG  718


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