BAC Information

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BAC

Clone NameB6Ng01-248D12
Chromosome17 (Build37)
Map Location 82,494,906 - 82,496,032
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043700, LOC100043704, Slc8a1, EG668832, LOC100043707
Downstream geneLOC625467, LOC668836, EG433141, EG625514, LOC100043711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248D12.bB6Ng01-248D12.g
ACCGA056350GA056351
length1,133590
definitionB6Ng01-248D12.b B6Ng01-248D12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaaatgaatactagaatatatattgggtaggtgaacctaata
aacaattcttaatttaaaaaaaggacaatgacaacaaaaataaatttaaa
gcatttctagagatttgaggaatgtgaagaaaaataacctgatattgaca
tcctatttagtcagcatgactgtcatcaaagaacgaatgccagttaaagt
taaattacaatagaacatagatacaatattactggatgcatatttatata
aacactatggaaatcagtatagactttcctcaagatcagaaaacagaaca
gccatatagtctagtttttttacttttgcatatatatttgaaggatgcct
acttatcacaacaaagatttatctatgtctattctatcactgcccagaca
acacacatacacacacacactggtaagccatatactgtttcttaagccat
aaaggacaataaaatcacatccctttcagggacataaatgctggtctaca
ttataatattgcgtgttttctaaataatacgaatctagactgaaaaagaa
aacagtacatgaaggccaagtagtaactatttggaaagaagtagaccaga
gagtgtatgtagagaaaataaagaaatgatagagagatatgaatgaaaca
ccattttatactatgaatacatttacaaatagtgtgttgaagaataaaac
aataaattatatatttattttgataatataaaaacattattaaaaaactg
tgttgtcactaaaatttaagctactgactaatcaagtagaaatttaaatg
gtattcgtatttagtaataatttgctacagttaaaaagaagaatgctctt
atgttaatagaatttaaaaaatgtgtaaggtgtgttgatgaggagaaaca
attatgctgaaagggcagtgagatggcttagtgcagagaggttgcagcat
gcaagcccaaatgagcaagttcaagcatgcatctcacaggagaagctgac
ctttgatagcctgtcctctgaccccccacaaacacagcacacatgttata
tgatgaagtataccacacttacacacacttaccaacacatgccagccatg
cacacacacataagcaggaaaccactaatatga

gaattctttgtttagctctctatcccattttttaaatagggttatttggg
tttctgaagtctaacactttgaattccatatatattttagatattagtcc
tctatatgatgtagaggtggtaaagaacttttcccaatttgtagattgcc
tttttgtcctattgacagtgtccttttccttacagaagcttttcagtttc
atgagatcctatttgttaatagttgaccttaaagcctgagccattgatgt
tctcttcatgaaattttcccctgtgcagatgttttccagattcgtcccca
ttttctcttctattagattcagggtatctggttttatgtggaggtccttg
atccacttggacttgagctatgtacaaggaggtgaaagtggaccaatttg
cattcttctacatgcaaaccaccagttagaccacaccatttgttaaaaat
gctttcttttttctactgtatggttttggcttctttgtcaaagatcaagt
gattacagtgtagtagccatggatgaactaggtacctgaaagagaggctg
gaaatgaaaaaggacaggagtggggtggggtggggagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82494906_82496032
seq2: B6Ng01-248D12.b_47_1179 (reverse)

seq1  TCATATTAGTGTGTTTTCTTTGTATATGTGTGTGCAT-GCTTGCATGTGT  49
      ||||||||||| |||| ||   ||| ||||||||||| ||| ||||||||
seq2  TCATATTAGTG-GTTTCCTGCTTATGTGTGTGTGCATGGCTGGCATGTGT  49

seq1  GTGTATGTGTGTGT-AGTGT-GTATACTCATTCATAT-ACATGTGTGCTG  96
        ||| |||||||| ||||| |||||||   |||||| ||||||||||||
seq2  TGGTAAGTGTGTGTAAGTGTGGTATACTTCATCATATAACATGTGTGCTG  99

seq1  TGTTTGT-GGGGGTCAGAGGACA-GCTATC-AAGGTCAGCTTCCTCCTGT  143
      ||||||| ||||||||||||||| |||||| ||||||||||| |||||||
seq2  TGTTTGTGGGGGGTCAGAGGACAGGCTATCAAAGGTCAGCTT-CTCCTGT  148

seq1  GAGATGCATGCTTGAACTTGCTCATTT-GGCTTGCATGCTGCAACCTCTC  192
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAGATGCATGCTTGAACTTGCTCATTTGGGCTTGCATGCTGCAACCTCTC  198

seq1  TGCACTAAGCCATCTCACCTGCCC-TTCAGCATAATTGTTTCTCCTCATC  241
      ||||||||||||||||| |||||| |||||||||||||||||||||||||
seq2  TGCACTAAGCCATCTCA-CTGCCCTTTCAGCATAATTGTTTCTCCTCATC  247

seq1  AACACACCTTACACATTTTTTAAATTCTATTAACATAAGAGCATTCTTCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACCTTACACATTTTTTAAATTCTATTAACATAAGAGCATTCTTCT  297

seq1  TTTTAACTGTAGCAAATTATTACTAAATACGAATACCATTTAAATTTCTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTGTAGCAAATTATTACTAAATACGAATACCATTTAAATTTCTA  347

seq1  CTTGATTAGTCAGTAGCTTAAATTTTAGTGACAACACAGTTTTTTAATAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTAGTCAGTAGCTTAAATTTTAGTGACAACACAGTTTTTTAATAA  397

seq1  TGTTTTTATATTATCAAAATAAATATATAATTTATTGTTTTATTCTTCAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATATTATCAAAATAAATATATAATTTATTGTTTTATTCTTCAA  447

seq1  CACACTATTTGTAAATGTATTCATAGTATAAAATGGTGTTTCATTCATAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATTTGTAAATGTATTCATAGTATAAAATGGTGTTTCATTCATAT  497

seq1  CTCTCTATCATTTCTTTATTTTCTCTACATACACTCTCTGGTCTACTTCT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTATCATTTCTTTATTTTCTCTACATACACTCTCTGGTCTACTTCT  547

seq1  TTCCAAATAGTTACTACTTGGCCTTCATGTACTGTTTTCTTTTTCAGTCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATAGTTACTACTTGGCCTTCATGTACTGTTTTCTTTTTCAGTCT  597

seq1  AGATTCGTATTATTTAGAAAACACGCAATATTATAATGTAGACCAGCATT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCGTATTATTTAGAAAACACGCAATATTATAATGTAGACCAGCATT  647

seq1  TATGTCCCTGAAAGGGATGTGATTTTATTGTCCTTTATGGCTTAAGAAAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCCTGAAAGGGATGTGATTTTATTGTCCTTTATGGCTTAAGAAAC  697

seq1  AGTATATGGCTTACCAGTGTGTGTGTGTATGTGTGTTGTCTGGGCAGTGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATGGCTTACCAGTGTGTGTGTGTATGTGTGTTGTCTGGGCAGTGA  747

seq1  TAGAATAGACATAGATAAATCTTTGTTGTGATAAGTAGGCATCCTTCAAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGACATAGATAAATCTTTGTTGTGATAAGTAGGCATCCTTCAAA  797

seq1  TATATATGCAAAAGTAAAAAAACTAGACTATATGGCTGTTCTGTTTTCTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGCAAAAGTAAAAAAACTAGACTATATGGCTGTTCTGTTTTCTG  847

seq1  ATCTTGAGGAAAGTCTATACTGATTTCCATAGTGTTTATATAAATATGCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGGAAAGTCTATACTGATTTCCATAGTGTTTATATAAATATGCA  897

seq1  TCCAGTAATATTGTATCTATGTTCTATTGTAATTTAACTTTAACTGGCAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAATATTGTATCTATGTTCTATTGTAATTTAACTTTAACTGGCAT  947

seq1  TCGTTCTTTGATGACAGTCATGCTGACTAAATAGGATGTCAATATCAGGT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCTTTGATGACAGTCATGCTGACTAAATAGGATGTCAATATCAGGT  997

seq1  TATTTTTCTTCACATTCCTCAAATCTCTAGAAATGCTTTAAATTTATTTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTTCACATTCCTCAAATCTCTAGAAATGCTTTAAATTTATTTT  1047

seq1  TGTTGTCATTGTCCTTTTTTTAAATTAAGAATTGTTTATTAGGTTCACCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCATTGTCCTTTTTTTAAATTAAGAATTGTTTATTAGGTTCACCT  1097

seq1  ACCCAATATATATTCTAGTATTCATTTTTTGAATTC  1127
      ||||||||||||||||||||||||||||||||||||
seq2  ACCCAATATATATTCTAGTATTCATTTTTTGAATTC  1133


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