MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-253M17
Chromosome	17 (Build37)	1 (Build37)
Map Location	80,746,604 - 80,747,698	13,655,875 - 13,656,246
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Cdc42ep3, LOC639964, AW061290, Cyp1b1, EG668821, Arl6ip2, LOC625074, Hnrpll, Gpx4-ps, Galm, Sfrs7, 4930560E09Rik, Gemin6, Dhx57, Morn2
Downstream gene	Sos1, Cdkl4, F420015M19Rik, Map4k3, LOC100043697, C230072F16Rik, LOC675572, EG668830, Tmem178, Thumpd2, LOC100043700, LOC100043704
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cdc42ep3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:260409 MGI:2384718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC639964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	AW061290 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381110 MGI:2147043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp1b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13078 MGI:88590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668821 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Arl6ip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC625074 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins pseudo : _no_value

name	Hnrpll (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72692 MGI:1919942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpx4-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110531 MGI:1890509
definition	note : glutathione peroxidase 4, pseudogene pseudo : _no_value

name	Galm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319625 MGI:2442420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225027 MGI:1926232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930560E09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67737 MGI:1914987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins

name	Gemin6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67242 MGI:1914492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx57 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106794 MGI:2147067
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Morn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:378462 MGI:2674071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sos1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20662 MGI:98354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdkl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381113 MGI:3587025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F420015M19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619329 MGI:3588283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	Map4k3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225028 MGI:2154405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043697 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	C230072F16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320784 MGI:2444727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC675572 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG668830 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668830 MGI:3643270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 288 ESTs, 2 Proteins

name	Tmem178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68027 MGI:1915277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thumpd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72167 MGI:1919417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 3 Proteins

name	LOC100043700 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043700
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043704 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Cdc42ep3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367815 GeneID:260409 MGI:2384718
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC42 effector protein (Rho GTPase binding) 3 transcript_id : NM_026514.2

name	LOC639964 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268817 GeneID:639964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to MOB1, Mps One Binder kinase activator-like 2B (yeast) transcript_id : XM_001480729.1

name	AW061290 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376382 GeneID:381110 MGI:2147043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW061290 transcript_id : NM_201361.2

name	Cyp1b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753567 GeneID:13078 MGI:88590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 1, subfamily b, polypeptide 1 transcript_id : NM_009994.1

name	EG668821 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402172 GeneID:668821 MGI:3644108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG668821 transcript_id : XM_001003779.1

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372303 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_178050.3

name	Arl6ip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372299 GeneID:56298 MGI:1929492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 2 transcript_id : NM_019717.2

name	Hnrpll (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347534 GeneID:72692 MGI:1919942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein L-like transcript_id : NM_144802.3

name	Galm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387049 GeneID:319625 MGI:2442420
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : galactose mutarotase transcript_id : NM_176963.3

name	Sfrs7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122584 GeneID:225027 MGI:1926232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 7 transcript_id : NM_146083.1

name	4930560E09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402174 GeneID:67737 MGI:1914987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins product : RIKEN cDNA 4930560E09 gene transcript_id : XM_283466.6

name	Gemin6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802223 GeneID:67242 MGI:1914492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gem (nuclear organelle) associated protein 6 transcript_id : NM_026053.2

name	Dhx57 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39573733 GeneID:106794 MGI:2147067
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 transcript_id : NM_198942.1

name	Morn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34850747 GeneID:378462 MGI:2674071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MORN repeat containing 2 transcript_id : NM_194269.1

name	Sos1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117414169 GeneID:20662 MGI:98354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Son of sevenless homolog 1 (Drosophila) transcript_id : NM_009231.2

name	Cdkl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343651 GeneID:381113 MGI:3587025
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 4 transcript_id : NM_001033443.2

name	F420015M19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402179 GeneID:619329 MGI:3588283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : RIKEN cDNA F420015M19 gene transcript_id : XM_001003844.1

name	Map4k3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486874 GeneID:225028 MGI:2154405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase kinase kinase kinase 3 transcript_id : NM_001081357.1

name	LOC100043697 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268819 GeneID:100043697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100043697 transcript_id : XM_001480757.1

name	C230072F16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402181 GeneID:320784 MGI:2444727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA C230072F16 gene transcript_id : XM_001003864.1

name	LOC675572 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268922 GeneID:675572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC675572 transcript_id : XM_001481199.1

name	EG668830 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402183 GeneID:668830 MGI:3643270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 288 ESTs, 2 Proteins product : predicted gene, EG668830 transcript_id : XM_001003873.1

name	Tmem178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517675 GeneID:68027 MGI:1915277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 178 transcript_id : NM_026516.2

name	Thumpd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268821 GeneID:72167 MGI:1919417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 3 Proteins product : THUMP domain containing 2, transcript variant 3 transcript_id : XM_898870.3

name	LOC100043704 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268823 GeneID:100043704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to Ubtf protein transcript_id : XM_001480762.1

name	LOC639964 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268818 GeneID:639964
definition	codon_start : 1 product : similar to MOB1, Mps One Binder kinase activator-like 2B (yeast) protein_id : XP_001480779.1

name	AW061290 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235741 CCDS:CCDS28985.1 GeneID:381110 MGI:2147043
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC381110 protein_id : NP_958749.1

name	Cyp1b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753568 CCDS:CCDS28986.1 GeneID:13078 MGI:88590
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0050381 - unspecific monooxygenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : cytochrome P450, 1b1, benz[a]anthracene inducible product : cytochrome P450, family 1, subfamily b, polypeptide 1 protein_id : NP_034124.1

name	EG668821 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402173 GeneID:668821 MGI:3644108
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003779.1

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372300 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 1 protein_id : NP_062691.3

name	Arl6ip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372304 GeneID:56298 MGI:1929492
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ARL-6 interacting protein-2; ADP-ribosylation-like factor 6 interacting protein 2 product : ADP-ribosylation factor-like 6 interacting protein 2 isoform 2 protein_id : NP_835151.2

name	Hnrpll (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347535 GeneID:72692 MGI:1919942
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : heterogeneous nuclear ribonucleoprotein L-like protein_id : NP_659051.3

name	Galm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892785 CCDS:CCDS28987.1 GeneID:319625 MGI:2442420
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004034 - aldose 1-epimerase activity [Evidence IEA] [Evidence ISS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] [Evidence ISS]; GO:0006012 - galactose metabolism [Evidence IEA] codon_start : 1 product : aldose 1-epimerase protein_id : NP_795937.1

name	Sfrs7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122585 CCDS:CCDS28988.1 GeneID:225027 MGI:1926232
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : splicing factor, arginine/serine-rich 7 (35kD) product : splicing factor, arginine/serine-rich 7 protein_id : NP_666195.1

name	4930560E09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51770412 GeneID:67737 MGI:1914987
definition	codon_start : 1 product : hypothetical protein LOC67737 protein_id : XP_283466.3

name	Gemin6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313050 CCDS:CCDS28989.1 GeneID:67242 MGI:1914492
definition	GO_component : GO:0016604 - nuclear body [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence IEA] codon_start : 1 product : gem (nuclear organelle) associated protein 6 protein_id : NP_080329.1

name	Dhx57 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39573734 CCDS:CCDS28990.1 GeneID:106794 MGI:2147067
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 homolog protein_id : NP_945180.1

name	Morn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34850748 GeneID:378462 MGI:2674071
definition	codon_start : 1 product : protein containing single MORN motif in testis protein_id : NP_919245.1

name	Sos1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117414170 GeneID:20662 MGI:98354
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005088 - Ras guanyl-nucleotide exchange factor activity [Evidence IMP]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IMP] codon_start : 1 note : guanine nucleotide releasing factor; son-of-sevenless 1; ras guanine exchange factor product : son of sevenless 1 protein_id : NP_033257.2

name	Cdkl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370314 CCDS:CCDS28992.1 GeneID:381113 MGI:3587025
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : cyclin-dependent kinase-like 4 protein_id : NP_001028615.1

name	F420015M19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402180 GeneID:619329 MGI:3588283
definition	codon_start : 1 product : similar to putative retrovirus-related gag protein protein_id : XP_001003844.1

name	Map4k3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486875 GeneID:225028 MGI:2154405
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence ISS] [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence ISS]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 note : germinal center kinase-like kinase-like product : mitogen-activated protein kinase kinase kinase kinase 3 protein_id : NP_001074826.1

name	LOC100043697 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268820 GeneID:100043697
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480807.1

name	C230072F16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402182 GeneID:320784 MGI:2444727
definition	codon_start : 1 product : hypothetical protein LOC320784 protein_id : XP_001003864.1

name	LOC675572 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268923 GeneID:675572
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481249.1

name	EG668830 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402184 GeneID:668830 MGI:3643270
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003873.1

name	Tmem178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517676 GeneID:68027 MGI:1915277
definition	codon_start : 1 product : hypothetical protein LOC68027 protein_id : NP_080792.2

name	Thumpd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268822 GeneID:72167 MGI:1919417
definition	codon_start : 1 product : THUMP domain containing 2 isoform 3 protein_id : XP_903963.2

name	LOC100043704 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268824 GeneID:100043704
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480812.1

name	LOC100043700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043700
definition	number : 1 pseudo : _no_value

name	LOC625074 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268921 GeneID:625074
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 389 ESTs, 5 Proteins product : similar to eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa pseudo : _no_value transcript_id : XR_035043.1

clone name	MSMg01-163M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-447N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-253M17.b	B6Ng01-253M17.g
ACC	GA060428	GA060429
length	1,099	986
definition	B6Ng01-253M17.b	B6Ng01-253M17.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(80,746,604 - 80,747,698)	(13,655,875 - 13,656,246)
sequence	gaattcattaaactacttcaaggtgggagcctctcttatttccctgatga aaagagtatgttggtcccagtaccagaagcaggaaatttgccttttctta cagcagccgagggtaagaacgttccctctgagtcatctgttagttatcac agaacaatagctactgcacggtttgcagttgctgagctctgtgttgaaat tagaaaccacaatgaaagcatacttcacctctcattccccgttcactcaa aagcatgcagctaggtaaaggcttatgggagaccggctgttgtgttctct taccccatgagccagtgtaaaatgcagcaattattgcattgtaggaagag ctgagcaatgcaatgtccatgattcaggccatcacttccaagcaagaaga aatgcagcagaaaatcgaacagctgcagcaggagaagagaagagaatctc gaaaggtcaaagccaagtgagtatcttaaaaaagatccattcagggcaaa cccataagcaatggccctgccacagaagccctgagaaaacttccagctat tcgcacataaggagtgggctcctgagcagcacagagcggcctgggctgga agggatgaagccatatagtcctggttaatactggggctggagaaatggct tgatagtcaagaacactggctgcttttgcagaggaccagagtttagttcc cagaacctcatcaggcagttcacagacgccttcgactccagctccagggg atccaacacccttctctggcctctgtaggtgaatgggtatgtgtagacac acacacacacacacacacacacacacgcacacacacacacgcaaacaaca acaaaacaaaacaaacaaaaatcccaaaacactcaccacaaatctgtaaa agcaacagagcttggatctttagcccacgtagctgtcacgatgtaagcca gcctgtgaactagtcgtattggtgagctttgggtttgattgaaagaccct gcctcgatggcatgagtagaagtaatggaggataacttaacaacctcaac tccagggcctccacatgcatgaaccacgtaatctaccatatatgtgttc	gaattccttgaaaaggaaccccatgtctgtgattacagctctcagcagat ggaggcaggaggctcgggacttcaagactagcctctgctacagatagaac tagagttcagctgtggctacatgacatcctgtccaaaaccccaaaataaa aacaacaagttagccgggcgtggtggcgcacgcctttaatcccagcactc gggaggcagaggcaggcagatttctgagttcgaggccagcctggtgtaca aagtgagttccaggacagccagggctatacagagaaaccctgtctcgaaa aaacaaaaacaaaaacaaaacaaaaaaccaacaaaaaaaccaacaagtta tatgttataacttggatgaagtttgatttaagagtattatgcgaagtgca atatgctagtcgcatataacagcagcacataataccatagaacccagtga atgcagccatcttagcacataagtggatactacgatgcttgtacaagaac aaaattgcctaatgtggtggtttgaataggtttggctcctagagactctt gagtgtgagtgcttgactatagagagtggcactgttaggagttgtggcct tgtggagatgggttttgagacctcatagaagctcaagtctgaccagtgtg acacaatccctttctgctgcctgtggatcaagacgtaaaactccgagttc ctgctgcagcaccatgtctgcctagaggctgtcatgcttcctgccatgat gataattgactgaacctctgaaactgtaagccagcactgttgcgggaaat atctagagctagcccctgcaccagacgatctaatttgctgggtctctcag cgcagcaattcaccagccctgccacatgtctcccaccaaggccatctctc caatggggccccgaagctcctctcaatttcacgaaatgccccacacatcc ctgggttagccattcaacaccctagttaccagatag
quality values	Open. Hide. 58 33 25 35 58 32 27 42 54 58 54 54 58 62 62 62 62 62 38 26 54 62 62 62 62 62 62 47 62 62 62 62 62 56 62 62 62 56 54 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 59 62 62 59 59 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 49 37 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 43 62 62 62 56 62 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 43 62 62 43 62 62 62 62 62 62 47 62 62 62 56 56 56 62 62 62 56 50 62 62 47 62 47 47 62 62 56 62 54 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 52 62 54 54 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 58 58 58 54 42 52 54 42 54 58 54 52 54 58 58 58 52 54 54 48 52 52 52 54 52 52 52 54 52 54 54 58 44 43 52 47 52 54 52 45 52 54 52 40 58 48 52 54 52 52 54 54 45 41 58 52 52 52 52 52 52 48 42 49 52 54 54 52 54 54 52 46 52 51 54 52 54 52 48 38 58 54 52 51 58 51 58 51 51 52 51 50 47 41 30 51 50 50 51 53 53 53 40 58 32 51 52 41 47 48 52 51 29 48 50 51 54 50 58 49 26 58 48 42 22 58 58 48 37 50 50 42 53 51 51 53 46 50 40 50 50 54 54 50 29 32 49 46 48 40 48 58 51 51 58 48 54 51 58 51 37 49 31 22 22 54 49 27 51 50 58 41 41 53 52 50 42 33 46 40 58 39 33 50 50 50 58 49 50 52 50 40 58 58 58 51 38 50 50 25 51 35 50 50 22 50 42 39 39 32 53 58 49 50 37 58 52 28 53 50 33 37 51 40 38 28 49 39 34 51 36 32 24 39 26 31 35 51 44 27 30 51 47 37 54 50 37 46 38 53 49 37 26 28 30 47 25 50 37 38 39 39 30 42 38 39 54 54 54 29 40 25 47 30 33 27 26 42 42 44 47 47 40 40 38 38 47 44 32 39 37 40 42 51 40 41 16 46 31 41 41 37 37 41 49 23 28 31 26 52 34 53 39 43 40 44 24 53 40 40 32 42 32 42 34 47 45 47 31 31 31 41 36 42 45 45 43 32 41 40 32 34 40 36 32 31 31 32 30 31 32 30 30 31 30 32 40 43 31 31 35 30 32 32 32 21 19 27 18 19 31 22 29 51 38 31 20 45 46 38 37 26 42 31 31 31 42 46 46 7 20 30 36 40 20 35 43 31 30 26 30 43 36 29 23 31 27 26 27 40 25 31 31 30 31 31 32 46 32 27 24 30 8 27 22 29 25 38 11 31 24 22 12 18 13 32 21 36 48 28 32 20 32 39 31 15 25 32 27 31 28 32 34 29 20 32 27 31 24 38 27 36 28 30 27 25 21 38 31 20 26 17 28 31 26 31 32 26 26 24 32 16 20 25 20 21 28 13 36 13 25 8 16 31 24 32 23 48 25 21 37 24 20 47 18 23 30 8 17 22 17 48 32 21 24 18 21 14 14 21 37 28 19 4 5 17 32 32 33 17 18 32 15 12 15 29 26 5 9 3 9 13 18 11 20 28 29 18 9 27 26 20 26 20 13 10 29 9 12 17 10 11 17 7 14 28 14 9 6 8 11 30 13 20 29 11 13 6 6 9 23 7 13 10 16 15 8 14 16 7 21 5 7 6 8 14 15 6 4 7 13 14 10 11 13 9 21 11 5 6 12 16 16 9 9 4 8 16	Open. Hide. 62 47 43 47 62 62 62 62 62 62 47 62 62 62 37 49 44 62 54 62 62 59 59 62 59 59 62 62 62 62 59 59 47 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 54 49 54 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 59 62 62 59 62 62 59 59 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 59 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 59 62 62 62 62 62 59 62 62 59 56 56 56 62 62 62 62 62 62 56 62 56 56 62 62 62 62 56 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 56 56 56 56 56 62 62 62 62 62 62 62 56 56 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 54 62 62 62 62 62 62 62 62 62 52 52 50 35 52 43 52 52 52 62 52 62 54 43 31 43 62 62 46 62 52 52 46 43 52 52 58 58 58 58 58 58 58 43 40 42 45 43 54 54 58 46 52 39 48 52 52 54 54 52 58 54 58 58 58 54 47 52 44 52 52 58 43 54 52 52 52 52 47 54 52 52 52 52 52 52 58 54 54 54 54 58 54 54 54 54 43 41 52 52 58 58 58 54 58 58 52 58 58 52 58 58 58 58 54 52 58 58 58 51 58 50 51 45 29 44 48 47 47 50 40 51 50 46 45 49 51 58 58 48 58 51 51 58 47 53 58 40 58 58 54 50 51 51 51 38 49 51 58 52 53 58 48 58 49 53 58 48 42 50 50 50 58 51 58 49 39 58 51 50 53 58 53 52 50 33 23 42 43 40 46 47 46 44 58 29 47 39 51 58 40 49 58 58 49 51 53 42 41 35 22 42 38 41 51 53 50 50 46 30 46 51 42 38 58 50 41 37 49 43 50 26 41 33 52 58 58 58 53 49 42 29 30 29 32 39 32 37 23 42 52 49 40 45 50 33 42 40 39 35 47 51 50 54 51 35 45 29 33 27 44 54 37 40 51 41 49 54 50 33 50 37 42 20 46 28 46 39 29 42 42 44 29 46 39 33 35 39 37 40 34 35 36 45 54 41 31 46 41 25 14 27 52 27 46 28 51 40 45 47 29 35 31 41 53 32 30 35 32 52 45 39 25 36 18 37 39 41 32 34 31 26 33 40 25 47 52 42 31 33 47 35 41 41 40 33 31 32 40 53 51 33 31 39 42 30 17 29 17 31 25 30 19 40 27 31 31 51 32 42 32 30 25 45 32 31 47 31 30 25 33 31 31 32 24 45 26 25 32 31 23 23 22 20 8 13 25 25 30 30 25 20 27 41 21 18 42 24 31 38 35 36 28 46 27 16 30 36 38 48 38 32 28 32 26 31 25 29 28 42 26 26 30 17 31 26 33 32 32 32 22 31 19 15 32 27 31 13 21 31 32 39 23 23 23 31 42 36 23 29 14 31 28 24 9 28 13 14 9 16 18 16 19 32 32 36 24 19 15 22 14 17 20 32 44 38 6 5 10 20 10 14 29 31 18 29 29 13 18 33 17 25 28 25 10 31 44 31 28 17 26 16 35 44 32 29 31 21 27 28 11 11 22 18 18 19 19 25 37 33 10 11 31 17 19 12 20 18 30 29 19 10 29 10 21 22 23 21 14 39 22 26 34 18 20 21 23 16 20 15 16 32 22 34 32

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_80746604_80747698
seq2: B6Ng01-253M17.b_47_1145

seq1  GAATTCATTAAACTACTTCAAGGTGGGAGCCTCTCTTATTTCCCTGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAACTACTTCAAGGTGGGAGCCTCTCTTATTTCCCTGATGA  50

seq1  AAAGAGTATGTTGGTCCCAGTACCAGAAGCAGGAAATTTGCCTTTTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTATGTTGGTCCCAGTACCAGAAGCAGGAAATTTGCCTTTTCTTA  100

seq1  CAGCAGCCGAGGGTAAGAACGTTCCCTCTGAGTCATCTGTTAGTTATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCGAGGGTAAGAACGTTCCCTCTGAGTCATCTGTTAGTTATCAC  150

seq1  AGAACAATAGCTACTGCACGGTTTGCAGTTGCTGAGCTCTGTGTTGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATAGCTACTGCACGGTTTGCAGTTGCTGAGCTCTGTGTTGAAAT  200

seq1  TAGAAACCACAATGAAAGCATACTTCACCTCTCATTCCCCGTTCACTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACCACAATGAAAGCATACTTCACCTCTCATTCCCCGTTCACTCAA  250

seq1  AAGCATGCAGCTAGGTAAAGGCTTATGGGAGACCGGCTGTTGTGTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGCAGCTAGGTAAAGGCTTATGGGAGACCGGCTGTTGTGTTCTCT  300

seq1  TACCCCATGAGCCAGTGTAAAATGCAGCAATTATTGCATTGTAGGAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCATGAGCCAGTGTAAAATGCAGCAATTATTGCATTGTAGGAAGAG  350

seq1  CTGAGCAATGCAATGTCCATGATTCAGGCCATCACTTCCAAGCAAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAATGCAATGTCCATGATTCAGGCCATCACTTCCAAGCAAGAAGA  400

seq1  AATGCAGCAGAAAATCGAACAGCTGCAGCAGGAGAAGAGAAGAGAATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGCAGAAAATCGAACAGCTGCAGCAGGAGAAGAGAAGAGAATCTC  450

seq1  GAAAGGTCAAAGCCAAGTGAGTATCTTAAAAAAGATCCATTCAGGGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTCAAAGCCAAGTGAGTATCTTAAAAAAGATCCATTCAGGGCAAA  500

seq1  CCCATAAGCAATGGCCCTGCCACAGAAGCCCTGAGAAAACTTCCAGCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAGCAATGGCCCTGCCACAGAAGCCCTGAGAAAACTTCCAGCTAT  550

seq1  TCGCACATAAGGAGTGGGCTCCTGAGCAGCACAGAGCGGCCTGGGCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCACATAAGGAGTGGGCTCCTGAGCAGCACAGAGCGGCCTGGGCTGGA  600

seq1  AGGGATGAAGCCATATAGTCCTGGTTAATACTGGGGCTGGAGAAATGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGAAGCCATATAGTCCTGGTTAATACTGGGGCTGGAGAAATGGCT  650

seq1  TGATAGTCAAGAACACTGGCTGCTTTTGCAGAGGACCAGAGTTTAGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTCAAGAACACTGGCTGCTTTTGCAGAGGACCAGAGTTTAGTTCC  700

seq1  CAGAACCTCATCAGGCAGTTCACAGACGCCTTCGACTCCAGCTCCAGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTCATCAGGCAGTTCACAGACGCCTTCGACTCCAGCTCCAGGGG  750

seq1  ATCCAACACCCTTCTCTGGCCTCTGTAGGTGAATGGGTATGTGTAGACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACACCCTTCTCTGGCCTCTGTAGGTGAATGGGTATGTGTAGACAC  800

seq1  ACACACACACACACACACACACACACGCACACACACACACGCAAACAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACGCACACACACACACGCAAACAACA  850

seq1  ACAAAACAAAACAAACAAAAATCCCAAAACACTCACCACAAATCTGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAACAAAAATCCCAAAACACTCACCACAAATCTGTAAA  900

seq1  AGCAACAGAGCTTGGATCTTTAGCCCACGTAGCTGTCACGATGTAAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGAGCTTGGATCTTTAGCCCACGTAGCTGTCACGATGTAAGCCA  950

seq1  GCCTGTGAACTAGTCGTATTGGTGAGCTTTGGGTTTGATTGAAAGACCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGAACTAGTCGTATTGGTGAGCTTTGGGTTTGATTGAAAGACCCT  1000

seq1  GCCTCGATGGCATGAGTAGAAAGTAATGGAGGATAACTT-ACAACCTCAA  1049
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  GCCTCGATGGCATGAGTAG-AAGTAATGGAGGATAACTTAACAACCTCAA  1049

seq1  CTCCA-GGCCTCCACATGCATGAA-CACGT-ATCTA-CATATATGTGTTC  1095
      ||||| |||||||||||||||||| ||||| ||||| |||||||||||||
seq2  CTCCAGGGCCTCCACATGCATGAACCACGTAATCTACCATATATGTGTTC  1099

seq1: chr1_13655875_13656246
seq2: B6Ng01-253M17.g_225_846

seq1  TAGCCGGGCGTGGTGGCACACGCCTTTAATCCCAGCACTCGGGAGGCAGA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAGCCGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGA  50

seq1  GGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTC  100
      ||||||| |||||||||||| |||||||||||||| ||||||||||||||
seq2  GGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTGTACAAAGTGAGTTC  100

seq1  CAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAAACCAAAAA  150
      ||||||||||| ||||| ||||||||||||||||||||||||| ||||||
seq2  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAA-CAAAAA  149

seq1  CAAAA--AAAAC-AAAAACAAAACAAAAAACCA-----------------  180
      |||||  ||||| |||||| ||  |||||||||                 
seq2  CAAAAACAAAACAAAAAACCAACAAAAAAACCAACAAGTTATATGTTATA  199

seq1  ---------------GACTTAGG---------------------------  188
                     || ||| |                           
seq2  ACTTGGATGAAGTTTGATTTAAGAGTATTATGCGAAGTGCAATATGCTAG  249

seq1  --GAATCAACCTGCATCA---AATAC------------------------  209
        | ||  | | ||| ||   |||||                        
seq2  TCGCATATAACAGCAGCACATAATACCATAGAACCCAGTGAATGCAGCCA  299

seq1  -----ACACAAAA----AAA-------------AAAAAAAAAAAA-----  232
            |||| ||    | |             | || || ||||     
seq2  TCTTAGCACATAAGTGGATACTACGATGCTTGTACAAGAACAAAATTGCC  349

seq1  -AA------------AATA-------------------------------  238
       ||            ||||                               
seq2  TAATGTGGTGGTTTGAATAGGTTTGGCTCCTAGAGACTCTTGAGTGTGAG  399

seq1  ------ACAA-----------------AGGA-------------------  246
            || |                 ||||                   
seq2  TGCTTGACTATAGAGAGTGGCACTGTTAGGAGTTGTGGCCTTGTGGAGAT  449

seq1  ------------CTCAT-----------TCT---CAGT---------TCC  261
                  |||||           |||   ||||         |||
seq2  GGGTTTTGAGACCTCATAGAAGCTCAAGTCTGACCAGTGTGACACAATCC  499

seq1  TCTGCCTTCTGTTTGTGGACTGAGATGT-GAACTCTTAGCTGCTGCTCCC  310
       ||  || |||  ||||||   ||| ||  |||||  || | ||||| | 
seq2  -CTTTCTGCTGCCTGTGGATCAAGACGTAAAACTCCGAGTTCCTGCTGCA  548

seq1  GCCAC----CTGCCTCCATGCCTTCA--CT--CTGCCATCAT-AGACT--  349
      ||  |    ||||||  | ||  |||  ||  ||||||| || | | |  
seq2  GCACCATGTCTGCCTAGAGGCTGTCATGCTTCCTGCCATGATGATAATTG  598

seq1  -CTAACCTTCTGAAACTGTAAGCC  372
       || | | ||||||||||||||||
seq2  ACTGAACCTCTGAAACTGTAAGCC  622

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information