BAC Information

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BAC

Clone NameB6Ng01-258H01
Chromosome17 (Build37)
Map Location 21,666,555 - 21,666,606
singlet/doubletsinglet
Overlap geneLOC100042508
Upstream geneEG627814, EG381065, EG224582, Fpr-rs3, EG433073, V1re2, V1re6, LOC100041976, V1re3, V1re1, V1re8, V1re7, V1re4, LOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53
Downstream geneZfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258H01.bB6Ng01-258H01.g
ACCGA063878GA063879
length1,015721
definitionB6Ng01-258H01.b B6Ng01-258H01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatttttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctctgcatttaacgtgatgatcatgtggtttttgtcttt
gagtttgtttatataatggattgcagtgatggatttccttatattgaacc
attcctgcatctctgggatgaaacctacttggtcaggatggatgtttctt
ttgatgtgttcttggatatgattagcaaaaactttattgagtatttttgc
atcacaattcataaggttaattggtctgaattcctctatctttgttgctt
ctgtttgtagtttaggtatcagagaaattgtggcttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatagtttgtgaagaactga
gattagatcttctttgaaggtctgatagaactctgcactaaaaccatctt
gtcctgggctttttttgtttgggagactattaatgactgcttttttctat
ttttttaggggatataggactgtttaggtcattaacctgagcttgattta
actttggtacctggtatctgtctagaaacttttccatttcgaccaggttc
tccacttttgttgagtatagcattttgtagaaggatctggggtgttttgg
atttcttcaggatctgttgttatggctcccttttcatttctgattttgtt
aattaggatgttgtccctgtgccctctagtgagtctgtctaagggtttta
tctatcttgttgattttctcaaagaaccagctcctcctttgtttgattct
ttgaatagttattcttttttccacttggttgatttcacccctgagttgat
tatttcctgctgtctactcctcttgggtgaatttgcttcctttgttctag
agcttttaggagtgttgtcaagctgctaatgtgtgctctctctattttct
tttgtaggcactcgagctattgagtttttcctcttagaaatgctttcatt
gtgtcccataaattt
gaattctcggtttagttctatactccattttttggttgggatatttggtt
ttttggtgattaagttcttgagtcctttatatattttgggttttagctct
ctattggatgtggggttagtgaatatttttttttcaatctggaggttgcc
aatttgtcttattgactatgtcctttggcttacagaagctttcaagtttt
gtgagttttcatttatcaattcttgatcttaaatcttgagtcattggagt
tctgtttaggaaatttccccctgtgccaatgagctcaaggctctttccca
ctttcttttctattagattcattgtatctggttttacgttgaggtctttg
gtccacttgtacttgagatttgtgcaaggtgaaaaatatggatatatttt
cattcttctacatacagccagccacatagaccagcaccatttattgaaat
gctttcttttttccattgtatatttttgttgcctttgtcaaaaattaagt
gacggtaagtgtgtgcttttatttctggatcttcaattctattccactga
tcaacatgcctgtctctctaccaataccatgcagtttttatcattattac
tctgtagtaaagcttgtggtcagggatggtgattatcccagctgttctct
tattgttaaaaattgtttttacaattctgggggtttgttttgttttgctt
tggtttggtttggtttggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_21666555_21666606
seq2: B6Ng01-258H01.g_724_783 (reverse)

seq1  AAACCAAAAACCAAACCAAACCAAAGCAAAACAAAAACAAAAAC------  44
      |||||  ||||||||||||||||||||||||| ||||||||  |      
seq2  AAACC--AAACCAAACCAAACCAAAGCAAAAC-AAAACAAACCCCCAGAA  47

seq1  -----AAAACAAT  52
           ||||||||
seq2  TTGTAAAAACAAT  60