BAC Information

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BAC

Clone NameB6Ng01-258H12
Chromosome17 (Build37)
Map Location 39,292,365 - 39,293,444
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985, LOC100043297
Downstream geneLOC100043300, EG668200, LOC672857, LOC627695, LOC634967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258H12.bB6Ng01-258H12.g
ACCGA063900GA063901
length8431,077
definitionB6Ng01-258H12.b B6Ng01-258H12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttcctccattacattctttctccgatcccggaatggatatat
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
atttatatgtatgtataactatttttattaggtattttcttcatttacat
cctaaatgttatcccaaaagtcccttatacccttctcccaccctgctccc
caacctacccactcccacttcatgaccttggcattcctttgtattgggtc
atataatctttgcaagaccaagggcctctcctctcaatgatcgccaacta
gaccatcttctgctacatatgcagctagagacatgagcctagggggtgct
ggttagttcatattgcttttcctcctatagggttacagatcccttcagct
ccttgggtactttttctaacacctccacctggggccctgtgttccaggca
atagatgactgtgagcatccacttctgtatctgccaggcactggcatagc
ctcacaagagacagctatatcagggtcctgttggcaaaatcttgctggca
tatgcagtagtgtctgggtttagtggttgtatatggtatagatctccgga
tggggcaatctctgcatggtccttccttccatctcagctccaaaaatttg
actctgtaattggatatttttgttcccatctaaagagggatggagtatcc
acaacttttgggcttccttcgcctcctgttttcaagtgtttttgaaaatt
gtatctttgggtatttctgaactttatgggctaattatccacttatcagt
gagttcatatcatgtgtgttcttttggatatttgggttacctc
gaattcactctgtagagaacgctggcctcgaactcagaaatccacctgct
tctgcctcccaagtactgggattagaggtgtgtgccatcacggcctggct
ccaatctcatttaatgagtttatatatattgttaatttgactaaagacta
agttgtttatctttctattactttcgatggcctatggagaaatagttttc
atatgcacaagattctagatagttaatgggcctctgtattactgttgaaa
tgaagagaaaattacttctaatagagaggtgctaagggggtgaatatcat
gaaaatcagatctatatttaccatgaaattaatggcaatgtgaataatga
atagagaaattatagaattaggatctcaattcattttctgctttccgttt
ttccatccaatatagtgaatcagtttccactgccattgtaaaatataaac
aaaaacaaacaaaacaaaaataaaaccataacaaaaacaaaaaccacaca
aaaaataaacaaaaaaaatatttccatttcctagtgttcagttgccaagt
cattgctagctattatatttgggtagagaatgcaaacttattcacttggt
ttcatagaacttcaagtattccaagacttcttggaacactttggattcca
gtagtctctactggtatccaatttcatatacctgttatgtagctctgaga
tgattaatcatgttaaacttccccttccttctgtgagttttgatggtagc
agcagaattatgagaaacaatgttactagaaaagaagatataactaaaac
caaccaaaggaaaattctttgttaggcaaaggagtatatccaatggttgg
gcagaaaaacaggaccacaggaagcagaaggttttaaaattgccatgcta
agaaaggaatatgatcagaatataagggctgcataagacagaaaagctgt
ataagaatcagaagctgaaaatgtcaagaagctgggaaagaaacaatgtc
cctcacagaggaatggatacagaaaaatggtgatacatatacacaagagt
gttatttaaaacattgagtcatgaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39292365_39293444
seq2: B6Ng01-258H12.g_64_1140

seq1  GAATTCACTCTGTAGAGAACGCTGGCCTCGAACTCAGAAATCCACCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGAGAACGCTGGCCTCGAACTCAGAAATCCACCTGCT  50

seq1  TCTGCCTCCCAAGTACTGGGATTAGAGGTGTGTGCCATCACGGCCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTACTGGGATTAGAGGTGTGTGCCATCACGGCCTGGCT  100

seq1  CCAATCTCATTTAATGAGTTTATATATATTGTTAATTTGACTAAAGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTCATTTAATGAGTTTATATATATTGTTAATTTGACTAAAGACTA  150

seq1  AGTTGTTTATCTTTCTATTACTTTCGATGGCCTATGGAGAAATAGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTATCTTTCTATTACTTTCGATGGCCTATGGAGAAATAGTTTTC  200

seq1  ATATGCACAAGATTCTAGATAGTTAATGGGCCTCTGTATTACTGTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACAAGATTCTAGATAGTTAATGGGCCTCTGTATTACTGTTGAAA  250

seq1  TGAAGAGAAAATTACTTCTAATAGAGAGGTGCTAAGGGGGTGAATATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGAAAATTACTTCTAATAGAGAGGTGCTAAGGGGGTGAATATCAT  300

seq1  GAAAATCAGATCTATATTTACCATGAAATTAATGGCAATGTGAATAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAGATCTATATTTACCATGAAATTAATGGCAATGTGAATAATGA  350

seq1  ATAGAGAAATTATAGAATTAGGATCTCAATTCATTTTCTGCTTTCCGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAAATTATAGAATTAGGATCTCAATTCATTTTCTGCTTTCCGTTT  400

seq1  TTCCATCCAATATAGTGAATCAGTTTCCACTGCCATTGTAAAATATAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCCAATATAGTGAATCAGTTTCCACTGCCATTGTAAAATATAAAC  450

seq1  AAAAACAAACAAAACAAAAATAAAACCATAACAAAAACAAAAACCACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAAACAAAAATAAAACCATAACAAAAACAAAAACCACACA  500

seq1  AAAAATAAACAAAAAAAATATTTCCATTTCCTAGTGTTCAGTTGCCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAACAAAAAAAATATTTCCATTTCCTAGTGTTCAGTTGCCAAGT  550

seq1  CATTGCTAGCTATTATATTTGGGTAGAGAATGCAAACTTATTCACTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTAGCTATTATATTTGGGTAGAGAATGCAAACTTATTCACTTGGT  600

seq1  TTCATAGAACTTCAAGTATTCCAAGACTTCTTGGAACACTTTGGATTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGAACTTCAAGTATTCCAAGACTTCTTGGAACACTTTGGATTCCA  650

seq1  GTAGTCTCTACTGGTATCCAATTTCATATACCTGTTATGTAGCTCTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTCTACTGGTATCCAATTTCATATACCTGTTATGTAGCTCTGAGA  700

seq1  TGATTAATCATGTTAAACTTCCCCTTCCTTCTGTGAGTTTTGATGGTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAATCATGTTAAACTTCCCCTTCCTTCTGTGAGTTTTGATGGTAGC  750

seq1  AGCAGAATTATGAGAAACAATGTTACTAGAAAAGAAGATATAACTAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAATTATGAGAAACAATGTTACTAGAAAAGAAGATATAACTAAAAC  800

seq1  CAACCAAAGGAAAATTCTTTGTTAGGCAAAGGAGTATATCCAATGGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAAGGAAAATTCTTTGTTAGGCAAAGGAGTATATCCAATGGTTGG  850

seq1  GCAGAAAAACAGGACCACAGGAAGCAGAAGGTTTTAAAATTGCCATGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAAACAGGACCACAGGAAGCAGAAGGTTTTAAAATTGCCATGCTA  900

seq1  AGAAAGGAATATGATCAGAATATAAGGGCTGCATAAGACAGAAAAAGCTG  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAAAGGAATATGATCAGAATATAAGGGCTGCATAAGACAG-AAAAGCTG  949

seq1  TATAAGAATCAGAAGCTGAAAATGTCAAGAAGCT-GGAAAGAAACCAAAT  999
      |||||||||||||||||||||||||||||||||| ||||||||||  |||
seq2  TATAAGAATCAGAAGCTGAAAATGTCAAGAAGCTGGGAAAGAAAC--AAT  997

seq1  GTCCCTCACCAGAGGAATGGATACAGAAAA--TGTGATACATATACACAA  1047
      |||||||| |||||||||||||||||||||   |||||||||||||||||
seq2  GTCCCTCA-CAGAGGAATGGATACAGAAAAATGGTGATACATATACACAA  1046

seq1  AGAAGTG-TATTTAAAACAATGAATTCATGAAAT  1080
         |||| ||||||||||| || | |||||||||
seq2  --GAGTGTTATTTAAAACATTG-AGTCATGAAAT  1077