BAC Information

Click to search

BAC

Clone NameB6Ng01-258M02
Chromosome17 (Build37)
Map Location 22,783,380 - 22,784,241
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185
Downstream geneENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258M02.bB6Ng01-258M02.g
ACCGA064112GA064113
length1,198996
definitionB6Ng01-258M02.b B6Ng01-258M02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacaggagagaaaccttacaaatgtagtaaatgtgacaaacat
tttaccaccaaaggtgaacttaaaaatcatcagagaattcatataggaga
gaaaccttacaaatgtagtgaatgtggaaaatactttacccaaaaaggga
gtcttattattcatcagagaattcatacaggagagaaaccttacaaatgt
agtgaatgtgacaaatgctttacccaaaaatgcagtcttatttttcatca
gagagttcatacaggagagaatcctcacaaatgtagtgaatgtgacaaat
gcttcaccctcaaaagtgatcttagagttcatcagagaattcacacagga
gagaaaccttacaaatgtaatgaatgtgacacgtcttttatcaagaaatc
caatcttagaagacatcagagaattcatacaggagagaaaccttacaaat
gtaacgaatgtgaaaaatcctttacccacaaatgcagtcttagcattcat
cagagaagtcatacaggagaaagaccttacaagtgtagtgaatgtgacaa
acgctttaccaacaaaggctaccttgtaagtcatcagaggaatcatacag
gagagaaaccttacaaatgtgatgaatgtgacaaatgttttacccacaaa
tgcagtcttagtattcatcagagatctcatacagaagagaaaccttacat
atgtagtgaatgtggtaaattctttagccacaaaagtagtcttcacactc
atcagagaatacatacagtagagaaaatttacaaatgaagtgaatgagac
aaattctataccaagaatataccaaagcttacatattggagagaaacctc
acaaacataatgtaagatgaaaggtctttacctgtatttcagtctaagaa
aatatctgaacatttatagtgggaaaaagtttccaaccgacaaaaatgac
atgtgatttatccaagcagtattctttgcaacacttgagctcacacaaag
aatatcatgaaacaagaaacttgtgaagtctttatgttcaaatcttacag
ctatgctgagaaaacactgaaaatggtgacactggatggaaagtttcatg
tactctttaatggttaccttcaatatttcaatatgaagacaatggcagcc
tagaactggaccttgtgtaacagtttctatggataactgtgacctaac
gaattcattgaagaattcatgcagaagacaatccttaccactatattgag
gttgccaaatcctttatcttggtttcaggtcttagaaaagaattacatag
tgggaaaatcttttagtggaaaatgatgtggaatataatttccacagaac
tttgtctttacagaccacctaagtctctacactaaaatctttaagattat
gcgaaacttgtaaactatttgttccatattttaatgtcagtaaacaacaa
gagtacatattgtggggaaagaattctgaaagtatgacaacgttggaaaa
tcatttttaaatcttttaaaagttattttactttttctttttttcttatc
ttccttttttaaaattaatttatttttacagtccatattccatcccctgc
ccccatccacactctgattgctccaaatcccacacattctttccactcaa
ccctgtttccatgtggatacccccatcctccgccccacctgacatctaaa
ctccctgaggcctccagtatcttgagggttaggtgcctcgtctctgaatg
aacacagacccagaagtcctctactgtaaacacatatcagctggtgtatg
ctgtctctttggtgacccagagtttgagagatcttgggggtcctgattaa
ttgagactgcttatcctcctacaggattgcccttctcagcttctttcagc
ctcccctaattcaacaacagaggtcagctgtttctttccattggttggct
gcaaatatctgcatctgactcttagctgtttgttgggttttttggagggc
agtcattataggtgcctttttgtgagtactccatagcctcagtaatagtg
tcaggtcttgggacctctccttaagctggatcccactttgggcctattgc
tggatcttctttgcctcaggatcctctccatttctatcactgtaattctt
cagacaggaacattatgtgtcagatttgactgtgggatggcacccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22783380_22784241
seq2: B6Ng01-258M02.g_66_927

seq1  GAATTCATTGAAGAATTCATGCAGAAGACAATCCTTACCACTATATTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAAGAATTCATGCAGAAGACAATCCTTACCACTATATTGAG  50

seq1  GTTGCCAAATCCTTTATCTTGGTTTCAGGTCTTAGAAAAGAATTACATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAAATCCTTTATCTTGGTTTCAGGTCTTAGAAAAGAATTACATAG  100

seq1  TGGGAAAATCTTTTAGTGGAAAATGATGTGGAATATAATTTCCACAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAATCTTTTAGTGGAAAATGATGTGGAATATAATTTCCACAGAAC  150

seq1  TTTGTCTTTACAGACCACCTAAGTCTCTACACTAAAATCTTTAAGATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTACAGACCACCTAAGTCTCTACACTAAAATCTTTAAGATTAT  200

seq1  GCGAAACTTGTAAACTATTTGTTCCATATTTTAATGTCAGTAAACAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAACTTGTAAACTATTTGTTCCATATTTTAATGTCAGTAAACAACAA  250

seq1  GAGTACATATTGTGGGGAAAGAATTCTGAAAGTATGACAACGTTGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACATATTGTGGGGAAAGAATTCTGAAAGTATGACAACGTTGGAAAA  300

seq1  TCATTTTTAAATCTTTTAAAAGTTATTTTACTTTTTCTTTTTTTCTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTAAATCTTTTAAAAGTTATTTTACTTTTTCTTTTTTTCTTATC  350

seq1  TTCCTTTTTTAAAATTAATTTATTTTTACAGTCCATATTCCATCCCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTTAAAATTAATTTATTTTTACAGTCCATATTCCATCCCCTGC  400

seq1  CCCCATCCACACTCTGATTGCTCCAAATCCCACACATTCTTTCCACTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCACACTCTGATTGCTCCAAATCCCACACATTCTTTCCACTCAA  450

seq1  CCCTGTTTCCATGTGGATACCCCCATCCTCCGCCCCACCTGACATCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTTCCATGTGGATACCCCCATCCTCCGCCCCACCTGACATCTAAA  500

seq1  CTCCCTGAGGCCTCCAGTATCTTGAGGGTTAGGTGCCTCGTCTCTGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGAGGCCTCCAGTATCTTGAGGGTTAGGTGCCTCGTCTCTGAATG  550

seq1  AACACAGACCCAGAAGTCCTCTACTGTAAACACATATCAGCTGGTGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGACCCAGAAGTCCTCTACTGTAAACACATATCAGCTGGTGTATG  600

seq1  CTGTCTCTTTGGTGACCCAGAGTTTGAGAGATCTTGGGGGTCCTGATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTTGGTGACCCAGAGTTTGAGAGATCTTGGGGGTCCTGATTAA  650

seq1  TTGAGACTGCTTATCCTCCTACAGGATTGCCCTTCTCAGCTTCTTTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACTGCTTATCCTCCTACAGGATTGCCCTTCTCAGCTTCTTTCAGC  700

seq1  CTCCCCTAATTCAACAACAGAGGTCAGCTGTTTCTTTCCATTGGTTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTAATTCAACAACAGAGGTCAGCTGTTTCTTTCCATTGGTTGGCT  750

seq1  GCAAATATCTGCATCTGACTCTTAGCTGTTTGTTGGGTTTTTTGGAGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATCTGCATCTGACTCTTAGCTGTTTGTTGGGTTTTTTGGAGGGC  800

seq1  AGTCATTATAGGTGCCTTTTTGTGAGTACTCCATAGCCTCAGTAATAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTATAGGTGCCTTTTTGTGAGTACTCCATAGCCTCAGTAATAGTG  850

seq1  TCAGGTCTTGGG  862
      ||||||||||||
seq2  TCAGGTCTTGGG  862