BAC Information

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BAC

Clone NameB6Ng01-262B21
Chromosome17 (Build37)
Map Location 37,683,564 - 37,684,725
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111
Downstream geneOlfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262B21.bB6Ng01-262B21.g
ACCGA066618GA066619
length1,1661,180
definitionB6Ng01-262B21.b B6Ng01-262B21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcccttctttctgtggaattgcacagcatttgttccttggaga
ctagttaatatctttattatatttcattcatgttttgtaaaatagtaatg
actgattacattttcaagctaagaactgaaatacttctttgcttttgctg
tttgaaaatggacaacacacagacatgcaaaataatggtcactccattca
caacttcatgtttttgccaggtgtctcttcttatctgaagtgaatatgaa
tccatttgactatgggtggagagggacagcagtagaaattgttctgagat
ctgggtgaactacccattgtaccaattaaccttaaaccaagatataatac
ttatatcttaatagactgctataaaaattatcttaatagattgctataaa
aattactcacattttctgcactgctttgatttttatttattttaaatttg
ttcatctctttataagtatgaaggctcttctaatatgtggaagattgcag
ccaaaaagtcaggaagattaaaaatgttatttatgagatcagttttaata
aaactcaatgaattttagtactcataaaataagttttcagtgttgaaaaa
tgaaaaaatgagttgtataacaagctagtaatacaagaatgtttagatac
aatgtaactgtgctatgtgaaatctttatttgtatttataatttaggata
cttcaaagacatattaatgtagcttagaaagtaaaatataagcatacaga
gaaatatgcactgaaattatctttctttcaccttttaccacgtccattga
tttttctccaaaagaacattgtcactagtttctagatgctgtgaaacagg
ggacagagtcacagggttgaacttggctctttcaaaggcaattacagaga
attcctgtagtggagttaagttgagctctgagtttaaatgtttctgttaa
tgagaaaaccatcatcattgtcctttttctcaaataacttctatatcctg
gaccagactattacttttgtaggttattcagagagatgatacatgttttt
aggcaggattaccttaataaggtagaccaagtttcataattattaatgca
ttatgtttaagaaatgttttatagaattaacaatgttggggagccatagg
caacgctattgtccta
gaattctttgttttctccatctatggtaattgagagttttgctgggtata
gtagcctgggctggcatttgtgttctcttagtgtctgtataacagctgta
caggattgtctggctttcatagtctctggtgagaagtccggagtaattct
aataggtctgcttttatatgttacttgactttttcttcctactactttta
atattctgtctttatttaatgcatttgttgttctgattattatgtgttgg
gaaaaatttcttttttggtctagtctatttggagttctgtaggcttcttg
tatgttcatgggcatctatttaggtttgggaagttctcttctataatctt
gttgaagacatttgctcgccctttaagttgaaaaccttcattctcttcta
ctcctactatccgtagctttggtcttctcattgtgtcctggatttcctga
atgttttgagttaggatatttttacattttgcattttctttgattgctgt
gcccatgttctctatgggatcttctgcacctgagattctctttttcatct
cttgtatgctgtagctgatgcttgcatctgtggtttctgatttctttcct
aggatttctatcttcagagttgtctccctttgtgatttctttattgtttc
tacttccatttttagatcctggatggttttgttcaattccatcacctgtt
tggtaatgttttcctgtaactctcttagggacttttgtgcttcctactta
agggcttctagctgtttacctgtgttttcctgtatttcgttcttaaagtc
ctccatcatcatcatgagaagagactttagatacatgttttgcttttctg
gtatgatggtgtatccaggacttgctatggtgggaaagtttgggttctga
tgatgccaagtaaccttgggtttgtgttgcttctgtctggggctgcctcc
tgccatttgatatctcaaatgcttgctgcctcacatatctgattggagct
gtctctatatccagttgattcagactctcaaagtcagcttctctgtggat
tctttgattgggctctctgactgaaagattcaggtttgtccgagttcttt
gctagcaagcctttccctgaccttggatcctgagtgtgaatcagctcagg
ttttaccctgcgactgcgggattctcccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37683564_37684725
seq2: B6Ng01-262B21.b_47_1212 (reverse)

seq1  TAGGACAATAGCGTTGCCTTAATGGCT-CCCAACATTGTTTAAATCTAT-  48
      |||||||||||||||||||  |||||| |||||||||| |||| ||||| 
seq2  TAGGACAATAGCGTTGCCT--ATGGCTCCCCAACATTG-TTAATTCTATA  47

seq1  AAACA-TTCTTATACAT-ATGCATT-ATAATTATG-AACTTGGTCTACCT  94
      ||||| |||||| |||| ||||||| ||||||||| ||||||||||||||
seq2  AAACATTTCTTAAACATAATGCATTAATAATTATGAAACTTGGTCTACCT  97

seq1  TATTAGGTTAATCCTGCCTAAAAACATGTATCATCTCTCTGAATAACCTA  144
      ||||| | ||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGGTAATCCTGCCTAAAAACATGTATCATCTCTCTGAATAACCTA  147

seq1  CAAAAGTAATAGTCTGGTCCAGGATATAGAAGTTATTTGAG-AAAAGGAC  193
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAAAGTAATAGTCTGGTCCAGGATATAGAAGTTATTTGAGAAAAAGGAC  197

seq1  AATGATGATGGTTTTCTCATTAACAGAAACATTTAAACTCAGAGCTCAAC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGATGGTTTTCTCATTAACAGAAACATTTAAACTCAGAGCTCAAC  247

seq1  TTAACTCCACTACAGGAATTCTCTGTAATTGCCTTTGAAAGAGCCAAGTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCACTACAGGAATTCTCTGTAATTGCCTTTGAAAGAGCCAAGTT  297

seq1  CAACCCTGTGACTCTGTCCCCTGTTTCACAGCATCTAGAAACTAGTGACA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTGTGACTCTGTCCCCTGTTTCACAGCATCTAGAAACTAGTGACA  347

seq1  ATGTTCTTTTGGAGAAAAATCAATGGACGTGGTAAAAGGTGAAAGAAAGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTTTGGAGAAAAATCAATGGACGTGGTAAAAGGTGAAAGAAAGA  397

seq1  TAATTTCAGTGCATATTTCTCTGTATGCTTATATTTTACTTTCTAAGCTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCAGTGCATATTTCTCTGTATGCTTATATTTTACTTTCTAAGCTA  447

seq1  CATTAATATGTCTTTGAAGTATCCTAAATTATAAATACAAATAAAGATTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATATGTCTTTGAAGTATCCTAAATTATAAATACAAATAAAGATTT  497

seq1  CACATAGCACAGTTACATTGTATCTAAACATTCTTGTATTACTAGCTTGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGCACAGTTACATTGTATCTAAACATTCTTGTATTACTAGCTTGT  547

seq1  TATACAACTCATTTTTTCATTTTTCAACACTGAAAACTTATTTTATGAGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAACTCATTTTTTCATTTTTCAACACTGAAAACTTATTTTATGAGT  597

seq1  ACTAAAATTCATTGAGTTTTATTAAAACTGATCTCATAAATAACATTTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATTCATTGAGTTTTATTAAAACTGATCTCATAAATAACATTTTT  647

seq1  AATCTTCCTGACTTTTTGGCTGCAATCTTCCACATATTAGAAGAGCCTTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCTGACTTTTTGGCTGCAATCTTCCACATATTAGAAGAGCCTTC  697

seq1  ATACTTATAAAGAGATGAACAAATTTAAAATAAATAAAAATCAAAGCAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTATAAAGAGATGAACAAATTTAAAATAAATAAAAATCAAAGCAGT  747

seq1  GCAGAAAATGTGAGTAATTTTTATAGCAATCTATTAAGATAATTTTTATA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAATGTGAGTAATTTTTATAGCAATCTATTAAGATAATTTTTATA  797

seq1  GCAGTCTATTAAGATATAAGTATTATATCTTGGTTTAAGGTTAATTGGTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTATTAAGATATAAGTATTATATCTTGGTTTAAGGTTAATTGGTA  847

seq1  CAATGGGTAGTTCACCCAGATCTCAGAACAATTTCTACTGCTGTCCCTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGTAGTTCACCCAGATCTCAGAACAATTTCTACTGCTGTCCCTCT  897

seq1  CCACCCATAGTCAAATGGATTCATATTCACTTCAGATAAGAAGAGACACC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCATAGTCAAATGGATTCATATTCACTTCAGATAAGAAGAGACACC  947

seq1  TGGCAAAAACATGAAGTTGTGAATGGAGTGACCATTATTTTGCATGTCTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAAACATGAAGTTGTGAATGGAGTGACCATTATTTTGCATGTCTG  997

seq1  TGTGTTGTCCATTTTCAAACAGCAAAAGCAAAGAAGTATTTCAGTTCTTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTCCATTTTCAAACAGCAAAAGCAAAGAAGTATTTCAGTTCTTA  1047

seq1  GCTTGAAAATGTAATCAGTCATTACTATTTTACAAAACATGAATGAAATA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAAATGTAATCAGTCATTACTATTTTACAAAACATGAATGAAATA  1097

seq1  TAATAAAGATATTAACTAGTCTCCAAGGAACAAATGCTGTGCAATTCCAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGATATTAACTAGTCTCCAAGGAACAAATGCTGTGCAATTCCAC  1147

seq1  AGAAAGAAGGGAGGAATTC  1162
      |||||||||||||||||||
seq2  AGAAAGAAGGGAGGAATTC  1166