MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-263O21
Chromosome	17 (Build37)
Map Location	55,239,393 - 55,240,464
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Slc5a7, LOC668529, 1700025K24Rik, Trp53-ps, LOC240117, EG629178
Downstream gene	LOC100043833, LOC100043485, LOC677496, St6gal2, LOC383258, Pot1b, Emr4, Zfp119, BC011426, EG433125, BC031441, Ebi3, Ccdc94, Shd, Fsd1, AW049765, Mpnd, Sh3gl1, Chaf1a, Ubxd1, Hdgfrp2, S3-12
Link	Open Mouse BAC browser

Click to get alignment info.

name	Slc5a7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:63993 MGI:1927126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668529 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668529
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 6 Proteins pseudo : _no_value

name	1700025K24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69418 MGI:1916668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Trp53-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22060 MGI:98835
definition	gene_synonym : p53 note : transformation related protein 53, pseudogene pseudo : _no_value

name	LOC240117 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:240117
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG629178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629178 MGI:3647305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100043833 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins pseudo : _no_value

name	LOC100043485 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043485
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	LOC677496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	St6gal2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240119 MGI:2445190
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 32 Proteins pseudo : _no_value

name	Pot1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72836 MGI:1920086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Emr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52614 MGI:1196464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp119 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104349 MGI:1345189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC011426 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224893 MGI:2385058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433125 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433125 MGI:3643554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 287 ESTs, 10 Proteins

name	BC031441 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240120 MGI:2385323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ebi3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50498 MGI:1354171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc94 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72886 MGI:1920136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Shd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20420 MGI:1099461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fsd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240121 MGI:1934858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW049765 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106766 MGI:2147039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mpnd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68047 MGI:1915297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3gl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20405 MGI:700010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chaf1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27221 MGI:1351331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubxd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66530 MGI:1913780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hdgfrp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15193 MGI:1194492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S3-12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57435 MGI:1929709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc5a7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41055979 GeneID:63993 MGI:1927126
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 5 (choline transporter), member 7 transcript_id : NM_022025.3

name	1700025K24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402057 GeneID:69418 MGI:1916668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700025K24 gene transcript_id : XM_901213.2

name	EG629178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268758 GeneID:629178 MGI:3647305
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG629178 transcript_id : XM_894020.3

name	St6gal2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352074 GeneID:240119 MGI:2445190
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta galactoside alpha 2,6 sialyltransferase 2 transcript_id : NM_172829.2

name	Pot1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677916 GeneID:72836 MGI:1920086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protection of telomeres 1B transcript_id : NM_028370.1

name	Emr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349934 GeneID:52614 MGI:1196464
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGF-like module containing, mucin-like, hormone receptor-like sequence 4 transcript_id : NM_139138.2

name	Zfp119 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351474 GeneID:104349 MGI:1345189
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 119 transcript_id : NM_144546.4

name	BC011426 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665710 GeneID:224893 MGI:2385058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC011426 transcript_id : NM_145490.4

name	EG433125 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268879 GeneID:433125 MGI:3643554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 48 ESTs, 10 Proteins product : predicted gene, EG433125, transcript variant 2 transcript_id : XM_895083.3

name	EG433125 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268878 GeneID:433125 MGI:3643554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 286 ESTs, 10 Proteins product : predicted gene, EG433125, transcript variant 1 transcript_id : XM_484650.4

name	BC031441 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130188 GeneID:240120 MGI:2385323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC031441 transcript_id : NM_146249.4

name	Ebi3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70906480 GeneID:50498 MGI:1354171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Epstein-Barr virus induced gene 3 transcript_id : NM_015766.2

name	Ccdc94 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802679 GeneID:72886 MGI:1920136
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 94 transcript_id : NM_028381.2

name	Shd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677938 GeneID:20420 MGI:1099461
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : src homology 2 domain-containing transforming protein D transcript_id : NM_009168.1

name	Fsd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130725 GeneID:240121 MGI:1934858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type 3 and SPRY domain-containing protein transcript_id : NM_183178.2

name	AW049765 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122356 GeneID:106766 MGI:2147039
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW049765 transcript_id : NM_145934.1

name	Mpnd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803295 GeneID:68047 MGI:1915297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MPN domain containing transcript_id : NM_026530.4

name	Sh3gl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130840 GeneID:20405 MGI:700010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain GRB2-like 1 transcript_id : NM_013664.2

name	Chaf1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376418 GeneID:27221 MGI:1351331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromatin assembly factor 1, subunit A (p150) transcript_id : NM_013733.3

name	Ubxd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981252 GeneID:66530 MGI:1913780
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UBX domain containing 1 transcript_id : NM_024432.2

name	Hdgfrp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375363 GeneID:15193 MGI:1194492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatoma-derived growth factor, related protein 2 transcript_id : NM_008233.2

name	S3-12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375035 GeneID:57435 MGI:1929709
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasma membrane associated protein, S3-12 transcript_id : NM_020568.2

name	Slc5a7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543741 CCDS:CCDS28885.1 GeneID:63993 MGI:1927126
definition	GO_component : GO:0016021 - integral to membrane [Evidence NAS]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0015220 - choline transporter activity [Evidence IMP]; GO:0005307 - choline:sodium symporter activity [Evidence ISS]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0008292 - acetylcholine biosynthesis [Evidence IMP]; GO:0015871 - choline transport [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0007274 - neuromuscular synaptic transmission [Evidence IMP]; GO:0042136 - neurotransmitter biosynthesis [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IEA]; GO:0007271 - synaptic transmission, cholinergic [Evidence IMP] codon_start : 1 product : solute carrier family 5 (choline transporter), member 7 protein_id : NP_071308.2

name	1700025K24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82993933 GeneID:69418 MGI:1916668
definition	codon_start : 1 product : hypothetical protein LOC69418 protein_id : XP_906306.1

name	EG629178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268759 GeneID:629178 MGI:3647305
definition	codon_start : 1 product : similar to 4933411K20Rik protein protein_id : XP_899113.3

name	St6gal2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370242 CCDS:CCDS28886.1 GeneID:240119 MGI:2445190
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence ISS] GO_function : GO:0003835 - beta-galactoside alpha-2,6-sialyltransferase activity [Evidence ISS]; GO:0008373 - sialyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0007275 - development [Evidence ISS]; GO:0040007 - growth [Evidence ISS]; GO:0006054 - N-acetylneuraminate metabolism [Evidence IC]; GO:0009311 - oligosaccharide metabolism [Evidence ISS] codon_start : 1 product : beta-galactoside alpha-2,6-sialyltransferase II protein_id : NP_766417.1

name	Pot1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76677917 GeneID:72836 MGI:1920086
definition	GO_component : GO:0000784 - nuclear chromosome, telomeric region [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 note : Pot1-like product : protection of telomeres 1B protein_id : NP_082646.1

name	Emr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982827 GeneID:52614 MGI:1196464
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0015058 - epidermal growth factor-like module containing hormone receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : seven-span membrane protein FIRE; F4/80-like-receptor product : EGF-like module containing, mucin-like, hormone receptor-like sequence 4 protein_id : NP_631877.1

name	Zfp119 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536254 GeneID:104349 MGI:1345189
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : KRAB zinc finger protein product : zinc finger protein 119 protein_id : NP_653129.1

name	BC011426 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21729792 GeneID:224893 MGI:2385058
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC224893 protein_id : NP_663465.1

name	EG433125 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51770297 GeneID:433125 MGI:3643554
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_484650.1

name	EG433125 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82993899 GeneID:433125 MGI:3643554
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_900176.1

name	BC031441 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122835 GeneID:240120 MGI:2385323
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC240120 protein_id : NP_666361.1

name	Ebi3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657052 CCDS:CCDS28888.1 GeneID:50498 MGI:1354171
definition	GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0045523 - interleukin-27 receptor binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : Epstein-Barr virus induced gene 3 protein precursor protein_id : NP_056581.1

name	Ccdc94 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312171 GeneID:72886 MGI:1920136
definition	codon_start : 1 product : coiled-coil domain containing 94 protein_id : NP_082657.1

name	Shd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677939 GeneID:20420 MGI:1099461
definition	codon_start : 1 product : src homology 2 domain-containing transforming protein D protein_id : NP_033194.1

name	Fsd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147224 GeneID:240121 MGI:1934858
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] codon_start : 1 product : fibronectin type 3 and SPRY domain-containing protein protein_id : NP_899001.1

name	AW049765 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122357 CCDS:CCDS28889.1 GeneID:106766 MGI:2147039
definition	GO_component : GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : signal-transducing adaptor protein-2 protein_id : NP_666046.1

name	Mpnd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626001 GeneID:68047 MGI:1915297
definition	codon_start : 1 exception : unclassified translation discrepancy product : MPN domain containing protein_id : NP_080806.3

name	Sh3gl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305485 CCDS:CCDS28891.1 GeneID:20405 MGI:700010
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] [Evidence IDA] codon_start : 1 note : endophilin II; SH3 domain protein 2B product : SH3-domain GRB2-like 1 protein_id : NP_038692.1

name	Chaf1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304957 CCDS:CCDS28892.1 GeneID:27221 MGI:1351331
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : chromatin assembly factor 1, subunit A (p150) protein_id : NP_038761.1

name	Ubxd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13277354 CCDS:CCDS28893.1 GeneID:66530 MGI:1913780
definition	codon_start : 1 note : UBX domain-containing 2 product : UBX domain containing 1 protein_id : NP_077752.1

name	Hdgfrp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680201 CCDS:CCDS28894.1 GeneID:15193 MGI:1194492
definition	codon_start : 1 product : hepatoma-derived growth factor-related protein 2 protein_id : NP_032259.1

name	LOC240117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:240117
definition	number : 1 pseudo : _no_value

name	LOC240117 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:240117
definition	number : 2 pseudo : _no_value

name	LOC677496 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:677496
definition	number : 1 pseudo : _no_value

name	Trp53-ps (CDS detail)
type	polyA_site
link	vega ensembl
xref
definition	gene_synonym : p53 note : putative

name	Trp53-ps (CDS detail)
type	polyA_signal
link	vega ensembl
xref
definition	gene_synonym : p53 note : putative

name	Trp53-ps (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	gene_synonym : p53 note : no similarity to p53 cDNA pseudo : _no_value

name	LOC668529 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268757 GeneID:668529
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 6 Proteins product : similar to Armadillo repeat containing, X-linked 3 pseudo : _no_value transcript_id : XR_034597.1

name	LOC100043833 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268877 GeneID:100043833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins product : similar to Chain A, D92n,D94n Double Point Mutant Of Human Nuclear Transport Factor 2 (Ntf2) pseudo : _no_value transcript_id : XR_035013.1

name	LOC100043485 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268760 GeneID:100043485
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : hypothetical protein LOC100043485 pseudo : _no_value transcript_id : XR_034600.1

name	LOC383258 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268761 GeneID:383258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 32 Proteins product : similar to putative pheromone receptor pseudo : _no_value transcript_id : XR_034606.1

clone name	MSMg01-476J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057F13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-062L09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-305M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-182H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362D23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-277K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-344E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511N03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-384K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525M08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-263O21.b	B6Ng01-263O21.g
ACC	GA067968	GA067969
length	940	1,070
definition	B6Ng01-263O21.b	B6Ng01-263O21.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctctaaaatagactacatcctaagacaaagacaaaatttgatttc agaaaaaaactatgtattctatctgatcataatgcaataaatcaattgca aataaatctctaataggtatactgtcttagtcagggtttctattcctgca caaacatcatgaccaagaagcaagttggggaggaaagggtttattcggct tccatactgctgtttatcaccaaaggaagtcaggactggaactcaagcag gtcagaaagcaggagctgatgcagaagccatgaagggatgttctttactg gcttgcttcctctggcttgctcagcctgctctcttatagaacccaagact atcagcccagaaatggtttcacccacaaggggcttttccctcttgatcac tagttgagaaaatgccttacagctggatctcatggaggcatttcctcaac tgaagctcctttctctgtgataactccagctgtgtcaagttgacacaaaa ctaaccagtacatatacatactcacggagattaaacaacacatttttaaa atcaagaaagaagtgaaaatttccagaactaaaagaaagttaaaatataa cacaacaaaacctctgagacatagtaaaagagacaatactttgaaactgt tgaagtatttaaagatattgggacctttaaaagttagactgtgctttata ttgtaatattaataattaatatgagatctttgagattaacaaggaaggga agattatggttgaataaagatgtgctatttgccaagtagacaaaagtcaa ttgtgctggttggtttttgtcaacttgacccaaaccttgggaaaatttat ctgggaagattaatcttaattgagaaaccttcataaacttggcctattgg caaatctatagagaagtttcttgattgatatgtaaaggta	gaattccatctgaagcaacatcaatgaatgtctcttagtttaaagtacta ggccaactttaatttttattattaagtggctaaattccaaacagtcttac tgtgagcaatatttaaaactataatcattcctttctgtttaagtttaatg gaagagacatacccatgcataactttttttatttaacatgatttttaaac tcaatattgcagtcacttaacattgtataagttcaataaaattgtgatac attatgtttatcttttatcaccaacccccccccccaaacacacacacttc aggtcacattctacttatgttctaaagctgtattcttataatacacaccc tctcaagatcagaataatctttctactgtattgttttatattttaattct gtgtgagaatagaatagattggacagatttgtgtaattctcatttcctct tcacaatctactcaagatttacttgtcctgagacacaaccaattattctg tcttctccaaagttatttcatagttgcataatgtcaactatatatcacct gttcactcttctgcacagagatgcacctgcagctttctccttctgaaatg gcatataaacatccctttatctccagcctagacgtgaaatatctggtgat ggctggtcccctatttctgcaaagacttttgcaaactcttcaaagggcct ttttatgagagcactgggatggactcatgacaatcactttattgactgag ctatctgtatagttccagattgggacactttttaaaaattaaagaggaca tgattaataatgaagccaatgcaatagacaaagtcttaaacttctcgtag caaatgtggaggtatagatatactatgtaaaacttaaagattgctttgag ctacagattgttattgagtctttaagtgcttcttctaaagcttttccaat gaaagtgatgcagatgtttggggattgtatgatgtcatggggagattttt ttcctcgaccattatagctctcatcatgatcaagacaattccaggactac atctccttaagctgatcttc
quality values	Open. Hide. 46 31 33 35 58 54 62 62 45 46 62 62 62 56 47 62 49 62 62 54 47 42 62 62 62 62 62 62 62 47 32 30 34 28 25 24 28 28 45 45 50 43 49 62 62 59 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 40 43 34 43 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 47 47 62 56 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 52 62 62 62 58 58 54 58 54 58 42 41 41 54 58 52 58 58 54 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 52 58 58 58 58 58 58 58 54 52 58 58 58 58 58 54 53 58 58 52 58 52 54 58 58 58 58 51 58 58 54 52 58 58 58 48 45 41 41 58 58 49 51 51 51 49 58 58 48 51 45 47 41 30 50 51 46 45 47 54 53 58 58 45 27 32 34 50 54 50 47 50 49 58 58 58 51 58 42 53 50 50 58 51 41 50 51 58 54 47 49 58 50 43 58 58 37 58 49 58 58 32 53 33 41 58 52 46 58 49 48 49 40 46 47 58 51 58 58 38 30 43 49 58 28 15 58 58 50 39 53 50 49 32 49 41 50 58 39 53 51 52 58 53 50 52 50 52 52 58 26 37 49 40 47 49 40 39 58 53 51 49 50 52 45 42 52 53 53 49 54 40 37 34 39 52 54 41 49 49 28 49 40 39 38 46 49 41 29 39 39 36 47 27 49 39 49 47 40 37 29 53 42 41 47 47 42 43 42 48 41 38 30 54 52 42 37 33 39 40 34 40 35 29 44 54 42 45 37 25 25 27 24 31 32 33 47 31 32 53 53 41 25 31 31 23 32 22 20 36 32 41 32 40 53 34 32 32 36 47 29 49 49 52 40 53 32 36 30 33 37 33 33 31 31 30 51 45 31 37 31 33 38 31 28 32 26 16 36 46 51 15 26 51 31 32 31 31 32 31 46 29 22 32 23 30 41 46 26 24 31 34 20 26 24 27 33 37 31 32 11 41 48 35 29 29 28 41 34 35 31 31 46 33 30 46 21 31 20 12 24 31 31 26 23 30 23 27 25 46 20 27 31 30 24 28 34 31 39 35 37 33 20 31 48 22 32 7 11 21 31 22 37 26 24 19 16 15 29 21 11 44 11 33 29 8 30	Open. Hide. 62 46 59 59 62 62 59 49 62 62 40 36 30 28 27 28 28 34 59 49 42 42 56 62 62 62 62 62 59 62 62 62 54 49 54 59 62 62 62 62 59 62 62 59 62 62 62 59 59 59 62 62 62 59 59 59 59 54 49 33 43 54 62 62 54 62 59 62 62 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 49 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 56 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 46 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 53 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 45 39 58 58 58 58 46 54 54 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 52 58 58 58 58 58 58 58 40 54 58 58 58 58 58 51 58 50 52 52 54 46 58 42 51 40 58 51 52 58 58 58 58 58 50 50 58 58 58 51 53 42 47 51 58 54 51 50 51 58 58 50 47 58 51 50 50 52 50 48 51 58 50 49 50 58 54 58 43 58 58 58 53 47 54 41 51 53 32 53 47 58 47 46 36 47 49 51 49 50 58 58 51 52 52 49 51 52 58 58 39 51 39 32 51 58 35 53 54 54 35 42 54 54 49 34 41 44 49 44 42 52 53 42 35 54 49 31 42 32 50 51 54 50 44 41 24 54 38 41 52 39 46 46 37 37 51 47 38 51 44 23 27 38 42 54 54 52 33 30 37 51 29 53 32 41 30 33 41 35 54 46 33 28 39 49 32 28 52 32 29 32 45 36 32 35 40 34 32 35 34 40 53 40 41 28 47 45 31 31 33 41 38 17 52 32 35 32 32 31 40 31 32 32 31 31 30 41 25 29 21 31 46 24 31 45 51 41 31 25 25 25 45 51 51 51 31 30 51 51 51 24 31 22 25 51 33 31 42 21 31 31 20 25 31 31 27 12 27 31 32 31 33 31 31 42 33 35 28 41 24 19 25 31 43 32 22 33 26 32 19 42 31 35 48 33 31 31 34 33 31 31 46 38 32 25 37 32 38 37 32 31 32 11 34 21 41 36 24 31 23 22 14 23 17 27 23 29 31 25 35 33 21 13 19 20 28 22 29 27 35 29 24 44 43 34 33 37 25 26 48 36 24 31 19 25 36 28 32 44 24 20 32 19 34 33 33 33 21 31 31 20 12 14 15 22 32 17 28 34 30 19 33 21 24 43 26 22 24 19 16 24 31 20 19 32 29 16 7 9 20 47 25 24 26 30 48 43 22 11 21 16 29 31 32 30 48 30 23 25 6 30 20 27 28 7 4 8 5 13 3 40 13 14 32 30 19 11 10 14 16 5 12 7 34 4 10 26 13 8 30 7 14 21 21 9 20 7 20 21 12 3 29 28 21 24 7 10 8 12 5 17 9 5 4 15 9 20 6 8 16 28 12 13 24 16 24 13 16 9 12 10 13 4 10 15 8 20 7 5 12 4 9 6 9 8 11 12 3 2 2 4 6 7 2 1 3 5 3 3 7 8 7 5 9 8 4 22 8 7 17 8 16 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_55239393_55240464
seq2: B6Ng01-263O21.g_67_1136 (reverse)

seq1  GAAGAT-------AGGAGA------CCTGGAAATTGTCTTGTATCATGAT  37
      ||||||       ||||||      ||||| |||||||||| ||||||||
seq2  GAAGATCAGCTTAAGGAGATGTAGTCCTGG-AATTGTCTTG-ATCATGAT  48

seq1  TGAAGAGCTATAATGTGTCTGAGAAAAAAAAATCTCCCCATTGACATCCA  87
         |||||||||||| ||| |||  ||||||||||||||| |||||| ||
seq2  --GAGAGCTATAATG-GTC-GAG-GAAAAAAATCTCCCCA-TGACAT-CA  91

seq1  TACAATCCCCCAAACCATCCTGCATCAACTTTCATTGGAAAAGCTTTAGA  137
      ||||||||||  || ||| ||||||| |||||||||||||||||||||| 
seq2  TACAATCCCC--AAACAT-CTGCATC-ACTTTCATTGGAAAAGCTTTAG-  136

seq1  AAGAAGCACTTAAAGACTCAATAACAAATCTGTAGCTCAAAGCAATCTTT  187
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGAAGCACTTAAAGACTCAATAAC-AATCTGTAGCTCAAAGCAATCTTT  185

seq1  AAGTTTTACATAGTATATCTATACCTCCACATTTGCTACGAGAAGTTTAA  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTACATAGTATATCTATACCTCCACATTTGCTACGAGAAGTTTAA  235

seq1  GACTTTGTCTATTGCATTGGCTTCATTATTAATCATGTCCTCTTTAATTT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGTCTATTGCATTGGCTTCATTATTAATCATGTCCTCTTTAATTT  285

seq1  TTAAAAAGTGTCCCAATCTGGAACTATACAGATAGCTCAGTCAATAAAGT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGTGTCCCAATCTGGAACTATACAGATAGCTCAGTCAATAAAGT  335

seq1  GATTGTCATGAGTCCATCCCAGTGCTCTCATAAAAAGGCCCTTTGAAGAG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCATGAGTCCATCCCAGTGCTCTCATAAAAAGGCCCTTTGAAGAG  385

seq1  TTTGCAAAAGTCTTTGCAGAAATAGGGGACCAGCCATCACCAGATATTTC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAAGTCTTTGCAGAAATAGGGGACCAGCCATCACCAGATATTTC  435

seq1  ACGTCTAGGCTGGAGATAAAGGGATGTTTATATGCCATTTCAGAAGGAGA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTAGGCTGGAGATAAAGGGATGTTTATATGCCATTTCAGAAGGAGA  485

seq1  AAGCTGCAGGTGCATCTCTGTGCAGAAGAGTGAACAGGTGATATATAGTT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCAGGTGCATCTCTGTGCAGAAGAGTGAACAGGTGATATATAGTT  535

seq1  GACATTATGCAACTATGAAATAACTTTGGAGAAGACAGAATAATTGGTTG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTATGCAACTATGAAATAACTTTGGAGAAGACAGAATAATTGGTTG  585

seq1  TGTCTCAGGACAAGTAAATCTTGAGTAGATTGTGAAGAGGAAATGAGAAT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGGACAAGTAAATCTTGAGTAGATTGTGAAGAGGAAATGAGAAT  635

seq1  TACACAAATCTGTCCAATCTATTCTATTCTCACACAGAATTAAAATATAA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAATCTGTCCAATCTATTCTATTCTCACACAGAATTAAAATATAA  685

seq1  AACAATACAGTAGAAAGATTATTCTGATCTTGAGAGGGTGTGTATTATAA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATACAGTAGAAAGATTATTCTGATCTTGAGAGGGTGTGTATTATAA  735

seq1  GAATACAGCTTTAGAACATAAGTAGAATGTGACCTGAAGTGTGTGTGTTT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGCTTTAGAACATAAGTAGAATGTGACCTGAAGTGTGTGTGTTT  785

seq1  GGGGGGGGGGGTTGGTGATAAAAGATAAACATAATGTATCACAATTTTAT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGGTTGGTGATAAAAGATAAACATAATGTATCACAATTTTAT  835

seq1  TGAACTTATACAATGTTAAGTGACTGCAATATTGAGTTTAAAAATCATGT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTATACAATGTTAAGTGACTGCAATATTGAGTTTAAAAATCATGT  885

seq1  TAAATAAAAAAAGTTATGCATGGGTATGTCTCTTCCATTAAACTTAAACA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAAAAGTTATGCATGGGTATGTCTCTTCCATTAAACTTAAACA  935

seq1  GAAAGGAATGATTATAGTTTTAAATATTGCTCACAGTAAGACTGTTTGGA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAATGATTATAGTTTTAAATATTGCTCACAGTAAGACTGTTTGGA  985

seq1  ATTTAGCCACTTAATAATAAAAATTAAAGTTGGCCTAGTACTTTAAACTA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCCACTTAATAATAAAAATTAAAGTTGGCCTAGTACTTTAAACTA  1035

seq1  AGAGACATTCATTGATGTTGCTTCAGATGGAATTC  1072
      |||||||||||||||||||||||||||||||||||
seq2  AGAGACATTCATTGATGTTGCTTCAGATGGAATTC  1070

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information