BAC Information

Click to search

BAC

Clone NameB6Ng01-265E08
Chromosome17 (Build37)
Map Location 82,343,874 - 82,344,248
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem178, Thumpd2, LOC100043700, LOC100043704, Slc8a1, EG668832
Downstream geneLOC100043707, LOC625467, LOC668836, EG433141, EG625514
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265E08.bB6Ng01-265E08.g
ACCGA068964GA068965
length1,191369
definitionB6Ng01-265E08.b B6Ng01-265E08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtggactgtatcttgggtattctgcacacggtttgttgttgtt
tatttgtttgtttgtttgtttggctaatatccacttattagtgagtacat
gttaatgtatgtccttttggtcttagttacctcactcaggatgatatttt
ctagttccattcatttgcctgtaaaactcaggacgtccttgttcttaata
gctgagtagtgttccactgtgtaaatgaaccacattttctgtatccgttc
ttctgttgtggagcatctaggttgtttccagcttctggctatcacaaata
aggctgctatgaacatagtggaacatgtgtccctgtggcatggtgaggca
tcttttgggtatatttctaagagtggtatagctgggtcttcaggtaggtc
tatttacaatttttctgaggaaactcctgattgatttccagaatgtttgt
accagtttgcaatcccaccagcaataaaggagtgttcctctttttccaca
tcctctccaatatgtgttgtcacctgaggttttgatcttagccattctga
tttgtataaggtgaaatctcggggttgttttgatttgcatttctctgatc
actaaggactttgaacatttctttaggtgcttcttagccattcgatattt
ctcagttgtgaattctcggttttgatctataccctatttttggatctggt
tgtttgtttttttggtgattatcttcttgagttctttatatattttggat
attagccctctatcggatgtggggttagtgaagaattttttcccaacctg
tagcttgctgatttgtcttactgactatgtcctttgccttacaaaagctt
tccagtctcatgaggttccatttatcaattgttgatattagagcatgagc
cattggagttctgttaggaaatttccccctgtgccaatgagttcaaggct
cttttccactttctctattagatttggtgtatctgggtttatatgaggtc
cttgatccacttggactgagctacaaggtgaacactatgggtctattttc
atctcatgtagaatgtagacagcagcacaattatgagatgctttcctttt
cattgtaatttttgaatgtcttggtcaagagatcaggtacatagtgtgga
gtatgcctggggtcttcagtctcgactctcgcatcagtata

ctgagtgtgcaaaggagtatatttgtgcattccttgggtcttctcttgga
ctccttttcttctgattgtttgtgttgtcccattctgatttgtttttctt
atattagtttttatttcattgctatctcttaggaatctatttgtttttct
aataagagacagaaaaggaaaagatctgggtgggaggagaaggagtagag
gaacttgaaggagtagagggtggggaacatattgtatgagaaaaatcata
ttaactaaacatgaataataataataataaatgaatgatggattgaagtg
aagtcatgcagatgttattgcaaaggaaggaaatttctactacttgagtt
gttttccatccaaagtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82343874_82344248
seq2: B6Ng01-265E08.g_69_443 (reverse)

seq1  TATACTTTGGATTGAAAACAACTCAAGTAGTAGATATTTCCTGCCTTTGC  50
      |||||||||||| ||||||||||||||||||||| ||||||| |||||||
seq2  TATACTTTGGATGGAAAACAACTCAAGTAGTAGAAATTTCCTTCCTTTGC  50

seq1  AATAACATCTGCATGACTTCACTTCAATCCATCATTCATTTATTATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATCTGCATGACTTCACTTCAATCCATCATTCATTTATTATTATT  100

seq1  ATTATTCATGTTTAGTTAATATGATTTTTCTCATACAATATGTTCCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCATGTTTAGTTAATATGATTTTTCTCATACAATATGTTCCCCAC  150

seq1  CCTCTACTCCTTCAAGTTCCTCTACTCCTTCTCCTCCCACCCAGATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTCCTTCAAGTTCCTCTACTCCTTCTCCTCCCACCCAGATCTTT  200

seq1  TCCTTTTCTGTCTCTTATTAGAAAAACAAATAGATTCCTAAGAGATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCTGTCTCTTATTAGAAAAACAAATAGATTCCTAAGAGATAGCA  250

seq1  ATGAAATAAAAACTAATATAAGAAAAACAAATCAGAATGGGACAACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAAAAACTAATATAAGAAAAACAAATCAGAATGGGACAACACAA  300

seq1  ACAATCAGAAGAAAAGGAGTCCAAGAGAAGACCCAAGGAATGCACAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAGAAGAAAAGGAGTCCAAGAGAAGACCCAAGGAATGCACAAATA  350

seq1  TACTCCTTTGCACACTCAGGAATTC  375
      |||||||||||||||||||||||||
seq2  TACTCCTTTGCACACTCAGGAATTC  375


| Home | SequenceCutter | Blast | Download |