BAC Information

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BAC

Clone NameB6Ng01-265G16
Chromosome17 (Build37)
Map Location 67,633,375 - 67,634,504
singlet/doubletsinglet
Overlap genePtprm
Upstream gene1110012J17Rik, LOC100043876, Rab12, 9130404H23Rik
Downstream geneLrrc30, Lama1, Arhgap28, D930040M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265G16.bB6Ng01-265G16.g
ACCGA069076GA069077
length1,1401,194
definitionB6Ng01-265G16.b B6Ng01-265G16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagattacctctagtcctggttgtaggcgtttgatatagcct
aataggtaacagatcaccagctgttaatcgcctccaattctcagcttctg
gatagaagaatacatctttcatctttcccactggaaagacaatcctggct
gcttaatagtcctggttcctctggagatctataggcacaagaacctcccc
cactatgccctggacacctagtgaggtactcgatggaagaagtcaagaag
ttctcacaattagttctactttttttttttttgaagagatttagctgcat
tctaaggagacatatgttctaaatagaaataaaagcaaaggtaaaatctg
gctatttgctccttggcagacaagcaatggccatacagcaagaaccacgt
atgctacactctccaggatggtagctgctcaacacatgtaagaagggaaa
cacatggaaccatctatgtcaacccaatgagggcaaacactgagtgctgg
aaataaggtttctaatatgatcacccagaaactagaaagcataacgtgca
aaaacaccacagcttcaaggaaacaaatgcatttaagcatccactctcaa
aaaaaaaatttgtaaatatattatcaattgtgggatttaatatttgatta
cactaagaatacatcttatatcagaaaacgattttctaagagacttagaa
atactcctcattttcgactctacagattctttccaaatcaagaaatcaag
agtgaaaaattaatgactgacaggttttgaacagtcagataataaagcgt
atcataattctttcctgattctcttaataaatctaaattaacataaggat
caatgcaacaatactaaattaacaaacgcacttaaactgccatcgtcatt
taatagcaattcatgcttttgcctctggatagtctactcaacagccctca
gtcgagggaacaaacgtgccgccattaagaggtgtcctatcccatcttcc
tcaagggcctggagcccttaggacagagccatcagcaggacctcacgcct
caacagctgcgccttcggcttcagcttccagagtcttagacctggtggag
tactcagccttaaatattatatccctcaggcacatcctac
gaattccatggaagtgtacttacagaaacgggttcctagtggctttaccc
ccatctctgcagccatggcctgaccctctccgtcagacctgccatggctg
agctacaagccatattctggtggtccgtaaccctgtgtgttcagtctgtg
cctggaaggttgtgccagttctagataggccaatgcacagacagcatctt
gcagaagaaagacagccagactcaagcaagaggccctgcacaccatgcaa
ggtcaagtgggggcaggattgaagtgatcaagagcagaagaggaggagag
aaaacatgttctccgcctccagatggatttacaagatcaggcacaatagg
tactctgagtccttttaaggatttgatagcttaacccactctggtggtct
cagaactattggggatagtcctaattggggtaacttgggtcatccattgg
gagtattgatttactgtgtgagactttaatagattatgattaggggtgag
gctctgaattggttggttgtatatcaaagcagggaggattttatgggctt
aactgtattctccagaaattagctagctctacaggggcaatcttttccca
attctagtgtaccaagaacacgaaaaaatataggttagcatacaggttca
ccatgagccttacatgtttgtttttcaaactatatttttgagaattcaat
tccaaaatggtcatgttcacccctcccgtggctccacttagataggcgta
tgctgtctctgcccaggcaagttttgtcctctgttctctcatacatcaag
ttccatttgtgctgcccatatagttttggagatatggcctttctgctgac
atgtggtcaattcacaagaactgtatccttaaagaaaactctatcctcta
gcagctattaattggcaatagctcctcagatagaggtgtgttgtgcccac
ctcgtccagcaggaaaaaacgcacacagtcagattctttctcaacagctt
ttattctggacgctcgaatgctacgggaatctcctgggaacccaggggag
actgctatatacacctcagccactgggaggctatgttgtctcttggaatg
gatcaagtctggcgcccttattatatgccaccactcgaagatgggtcgga
ttcggctatgccttttacatatgcgtttatgaggacccgtggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_67633375_67634504
seq2: B6Ng01-265G16.b_50_1189

seq1  GAATTCTTTAGATTACCTCTAGTCCTGGTTGTAGGCGTTTGATATAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGATTACCTCTAGTCCTGGTTGTAGGCGTTTGATATAGCCT  50

seq1  AATAGGTAACAGATCACCAGCTGTTAATCGCCTCCAATTCTCAGCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTAACAGATCACCAGCTGTTAATCGCCTCCAATTCTCAGCTTCTG  100

seq1  GATAGAAGAATACATCTTTCATCTTTCCCACTGGAAAGACAATCCTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAGAATACATCTTTCATCTTTCCCACTGGAAAGACAATCCTGGCT  150

seq1  GCTTAATAGTCCTGGTTCCTCTGGAGATCTATAGGCACAAGAACCTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATAGTCCTGGTTCCTCTGGAGATCTATAGGCACAAGAACCTCCCC  200

seq1  CACTATGCCCTGGACACCTAGTGAGGTACTCGATGGAAGAAGTCAAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGCCCTGGACACCTAGTGAGGTACTCGATGGAAGAAGTCAAGAAG  250

seq1  TTCTCACAATTAGTTCTACTTTTTTTTTTTTTGAAGAGATTTAGCTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAATTAGTTCTACTTTTTTTTTTTTTGAAGAGATTTAGCTGCAT  300

seq1  TCTAAGGAGACATATGTTCTAAATAGAAATAAAAGCAAAGGTAAAATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGAGACATATGTTCTAAATAGAAATAAAAGCAAAGGTAAAATCTG  350

seq1  GCTATTTGCTCCTTGGCAGACAAGCAATGGCCATACAGCAAGAACCACGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGCTCCTTGGCAGACAAGCAATGGCCATACAGCAAGAACCACGT  400

seq1  ATGCTACACTCTCCAGGATGGTAGCTGCTCAACACATGTAAGAAGGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACACTCTCCAGGATGGTAGCTGCTCAACACATGTAAGAAGGGAAA  450

seq1  CACATGGAACCATCTATGTCAACCCAATGAGGGCAAACACTGAGTGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGAACCATCTATGTCAACCCAATGAGGGCAAACACTGAGTGCTGG  500

seq1  AAATAAGGTTTCTAATATGATCACCCAGAAACTAGAAAGCATAACGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGTTTCTAATATGATCACCCAGAAACTAGAAAGCATAACGTGCA  550

seq1  AAAACACCACAGCTTCAAGGAAACAAATGCATTTAAGCATCCACTCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCACAGCTTCAAGGAAACAAATGCATTTAAGCATCCACTCTCAA  600

seq1  AAAAAAAATTTGTAAATATATTATCAATTGTGGGATTTAATATTTGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTTGTAAATATATTATCAATTGTGGGATTTAATATTTGATTA  650

seq1  CACTAAGAATACATCTTATATCAGAAAACGATTTTCTAAGAGACTTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGAATACATCTTATATCAGAAAACGATTTTCTAAGAGACTTAGAA  700

seq1  ATACTCCTCATTTTCGACTCTACAGATTCTTTCCAAATCAAGAAATCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCTCATTTTCGACTCTACAGATTCTTTCCAAATCAAGAAATCAAG  750

seq1  AGTGAAAAATTAATGACTGACAGG-TTTGAACAGTCAGATAATAAAGCGT  799
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGTGAAAAATTAATGACTGACAGGTTTTGAACAGTCAGATAATAAAGCGT  800

seq1  ATCATAATTC-TTCCTGATTCTCTTAATAAATCTAAATTAACATAAGGAT  848
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATTCTTTCCTGATTCTCTTAATAAATCTAAATTAACATAAGGAT  850

seq1  CAATGCAACAATACTAAATTAACAAACGCACTTAAACTGCCATCGTCATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAACAATACTAAATTAACAAACGCACTTAAACTGCCATCGTCATT  900

seq1  TAAATAGCAATTCATGCTTTTGCCTCTGGATAGTCTACTCAACAG-CCTC  947
      | ||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  T-AATAGCAATTCATGCTTTTGCCTCTGGATAGTCTACTCAACAGCCCTC  949

seq1  AGTCGAGGGAACAAACGTGCCGCCATT-AGA-GTGTCCTATCCCATCTTT  995
      ||||||||||||||||||||||||||| ||| ||||||||||||||| ||
seq2  AGTCGAGGGAACAAACGTGCCGCCATTAAGAGGTGTCCTATCCCATC-TT  998

seq1  CCTCAA-GGCCT-GAGCCC-TAAGACAGAGCATTAAGCAGGA-CTCACG-  1040
      |||||| ||||| |||||| || ||||||||  | ||||||| |||||| 
seq2  CCTCAAGGGCCTGGAGCCCTTAGGACAGAGCCATCAGCAGGACCTCACGC  1048

seq1  CTCAACAGCTGCGCCTTCGGCTTCAGGCTTCCCAGAGTCTTAGAC--TGT  1088
      ||||||||||||||||||||||||| |||| ||||||||||||||   ||
seq2  CTCAACAGCTGCGCCTTCGGCTTCA-GCTT-CCAGAGTCTTAGACCTGGT  1096

seq1  GGAGTACTCAGCCCTAAATATTATAT-CCTCA-GCACATCCTAC  1130
      ||||||||||||| |||||||||||| ||||| |||||||||||
seq2  GGAGTACTCAGCCTTAAATATTATATCCCTCAGGCACATCCTAC  1140