BAC Information

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BAC

Clone NameB6Ng01-265I18
Chromosome17 (Build37)
Map Location 91,348,126 - 91,349,322
singlet/doubletsinglet
Overlap geneNrxn1
Upstream genenone
Downstream geneEG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265I18.bB6Ng01-265I18.g
ACCGA069167GA069168
length1,187975
definitionB6Ng01-265I18.b B6Ng01-265I18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctgtagaccagcctggttttgatctcactgagatccatcga
tgtctgccttccaagtgctgacatcaaaggtgtgtaccaatactacttgt
ctttttaatttatttgtttgttatagggaattattttttagacttgtttt
ttgaatgcccgagaagtatctagtgagattcctatttttttcaataaaaa
attatagaaataaataaatagtgtcactctgctaaaacaatttctgtaac
atgataaagtatttactaaaactgtaccattactctcaataatgcaagaa
caaaaataaaaacagttttcttcatcatttttggtcaacacagtaatgag
ggtcccaaccaggaacataagcctggatggaaatattgaaaaagccaaac
cgtagcaaaagaacacataaagctgctattacccatggcagcccaactgc
acttttaacaattcagacacaaattacagaccattatagttactattgag
tataaacacagtaaaatctatgtgtctgtactcacttagcctaatagctc
tatcagcttgactaaccctcacaccttgccccttcatgacttttaaacag
ctgacccctcccccatcctgccaaatcaagatggtttaaccacaaatccg
acttactttccttagagtgtgaaccctagaagctcagaaacttcaaatcc
ttcttatatctaccaggtcagtattatttaagcctacagactgttttaga
aactatggtagtttttcttaagaacttgaaattcagcaatattcaatgtg
tttctcatagaaggtagtgccataaaggtaggagcccacctgctgggtcc
cttgtattctgttctgatatacaaaattaccaaactacatctggtcaagt
ggatggcaaaatgttttctctgactaaggccattttatgaccacaatgcc
ctagactcccagagttctccttttataacctctcacatctttgggttcca
tgaaggaaacatgaaaactagactcagatctggctcctctccctcatggc
agagtcctcacactctactagaatattaactagaaggaaaccttttcagc
acttaagccagattcatataggaaaatagatgtttttcgaggtctaggat
tacctcgattcaatgtaaagaaggatgcttttgtggc

gaattcactttgtagaccaggctggcctcaaactcagaaatccgcctgcc
tctgcctcccaagtgctgggattaaaggcatgcgccactaccgcccctct
gtatgtactccactttttaatagggtatttggttctctggagtcttccat
cttgagttctttgtatattttggatattagccctctactgcatgtagggt
tggtaaatatcttttctcaacctgggggttgttttgtcctattaatagtg
ccccttgatttacagaagcgtatcaattttataaggtcccatttgtcgat
tgttgcataagccattggtgttctgctcagtaagttttcccttgtgctca
agttcttgaggctcttccccactttctcttctgttagattcagtgtatct
ggttttatgtggaggtttttgatccacttggacttgagctttgtgcaagg
agatagatatggatgaatttgcattcttctacgtgcagttaagccagtgc
caactggcttgaaaattgttgaaaatgctgtcttttatccactgaatgat
tttagtttctttttcaaagatcaagtgactataggtgtgtgggttcattt
ctgggtcttcaattctagtccattgatctacttgcctgtttctgtaccaa
taccatgcagtttctctatagtacagcttgaggtcagggatggtgatttc
ccccagacgtttttttattgttaagaataggtttcactatcctaggtttt
ttgttactccaaatgaatttgagaattgctctttctaagtctatgaagaa
ttgagttgaaattttgatgggggattgcattgaatctgtagattactttc
ggaatgatggtcactttttactatattaatcctaccaatccatgagcata
agaaatctttccatcttctgagatcttcttcgatttctttcttcagagac
ttgaagttcttgccaaagagatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91348126_91349322
seq2: B6Ng01-265I18.b_48_1234

seq1  GAATTCAGTCTGTAGACCAGCCTGGTTTTGATCTCACTGAGATCCATCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTGTAGACCAGCCTGGTTTTGATCTCACTGAGATCCATCGA  50

seq1  TGTCTGCCTTCCAAGTGCTGACATCAAAGGTGTGTACCAATACTACTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCCTTCCAAGTGCTGACATCAAAGGTGTGTACCAATACTACTTGT  100

seq1  CTTTTTAATTTATTTGTTTGTTATAGGGAATTATTTTTTAGACTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAATTTATTTGTTTGTTATAGGGAATTATTTTTTAGACTTGTTTT  150

seq1  TTGAATGCCCGAGAAGTATCTAGTGAGATTCCTATTTTTTTCAATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGCCCGAGAAGTATCTAGTGAGATTCCTATTTTTTTCAATAAAAA  200

seq1  ATTATAGAAATAAATAAATAGTGTCACTCTGCTAAAACAATTTCTGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGAAATAAATAAATAGTGTCACTCTGCTAAAACAATTTCTGTAAC  250

seq1  ATGATAAAGTATTTACTAAAACTGTACCATTACTCTCAATAATGCAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAAGTATTTACTAAAACTGTACCATTACTCTCAATAATGCAAGAA  300

seq1  CAAAAATAAAAACAGTTTTCTTCATCATTTTTGGTCAACACAGTAATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAAAAACAGTTTTCTTCATCATTTTTGGTCAACACAGTAATGAG  350

seq1  GGTCCCAACCAGGAACATAAGCCTGGATGGAAATATTGAAAAAGCCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAACCAGGAACATAAGCCTGGATGGAAATATTGAAAAAGCCAAAC  400

seq1  CGTAGCAAAAGAACACATAAAGCTGCTATTACCCATGGCAGCCCAACTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCAAAAGAACACATAAAGCTGCTATTACCCATGGCAGCCCAACTGC  450

seq1  ACTTTTAACAATTCAGACACAAATTACAGACCATTATAGTTACTATTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAACAATTCAGACACAAATTACAGACCATTATAGTTACTATTGAG  500

seq1  TATAAACACAGTAAAATCTATGTGTCTGTACTCACTTAGCCTAATAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACACAGTAAAATCTATGTGTCTGTACTCACTTAGCCTAATAGCTC  550

seq1  TATCAGCTTGACTAACCCTCACACCTTGCCCCTTCATGACTTTTAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCTTGACTAACCCTCACACCTTGCCCCTTCATGACTTTTAAACAG  600

seq1  CTGACCCCTCCCCCATCCTGCCAAATCAAGATGGTTTAACCACAAATCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCCTCCCCCATCCTGCCAAATCAAGATGGTTTAACCACAAATCCG  650

seq1  ACTTACTTTCCTTAGAGTGTGAACCCTAGAAGCTCAGAAACTTCAAATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTTTCCTTAGAGTGTGAACCCTAGAAGCTCAGAAACTTCAAATCC  700

seq1  TTCTTATATCTACCAGGTCAGTATTATTTAAGCCTACAGACTGTTTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATATCTACCAGGTCAGTATTATTTAAGCCTACAGACTGTTTTAGA  750

seq1  AACTATGGTAGTTTTTCTTAAGAACTTGAAATTCAGCAATATTCAATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGGTAGTTTTTCTTAAGAACTTGAAATTCAGCAATATTCAATGTG  800

seq1  TTTCTCATAGAAGGTAGTGCCATAAAGGTAGGAGCCCACCTGCTGGGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATAGAAGGTAGTGCCATAAAGGTAGGAGCCCACCTGCTGGGTCC  850

seq1  CTTGTATTCTGTTCTGATATACAAAATTACCAAACTACATCTGGTCAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTCTGTTCTGATATACAAAATTACCAAACTACATCTGGTCAAGT  900

seq1  GGATGGCAAAATGTTTTCTCTGACTAAGGCCATTTTATGACCACAAATGC  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGATGGCAAAATGTTTTCTCTGACTAAGGCCATTTTATGACCAC-AATGC  949

seq1  CCTAGACTCCCAGAGTTCTCCTTTTATAACCTCTCACATCTTT-GGTTCC  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCTAGACTCCCAGAGTTCTCCTTTTATAACCTCTCACATCTTTGGGTTCC  999

seq1  ATGAAGGAAACATGAAAACTAGACTCAGATCTGGCTCCTCTCCCTCATGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAAACATGAAAACTAGACTCAGATCTGGCTCCTCTCCCTCATGG  1049

seq1  CAGGAGTCTTCAACACTCTTACTAAGATATTAAACCTTAAGAA-GAAAAC  1098
      || ||||| || |||||| |||||  |||||||  ||  |||| |||| |
seq2  CA-GAGTCCTC-ACACTC-TACTAGAATATTAA--CT--AGAAGGAAACC  1092

seq1  TTTTCAGCACTTTAAGCCAGAATCATATA-GAAAATAGAATGTTTTT-GA  1146
      |||||||||| |||||||||| ||||||| |||||||| |||||||| ||
seq2  TTTTCAGCAC-TTAAGCCAGATTCATATAGGAAAATAG-ATGTTTTTCGA  1140

seq1  GGTGCTAAAGATTACACTCAGAATCAAGGGAAAGAGAGATGCTTTTGTGG  1196
      ||| || | |||||| ||| || |||| | |||||  |||||||||||||
seq2  GGT-CT-AGGATTAC-CTC-GATTCAATGTAAAGAAGGATGCTTTTGTGG  1186

seq1  C  1197
      |
seq2  C  1187


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