BAC Information

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BAC

Clone NameB6Ng01-266J17
Chromosome17 (Build37)
Map Location 70,158,126 - 70,159,049
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622645, Epb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535
Downstream geneLOC100043630, LOC623112, LOC623143, Dlgap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266J17.bB6Ng01-266J17.g
ACCGA069961GA069962
length1,1721,156
definitionB6Ng01-266J17.b B6Ng01-266J17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgcaccccattttaaatagggttatttggttc
tctgcagtccaacttcttgagttcttagtatatattggatattagctcct
tatctgatttaggattgataaagatcttttcccaatctgttggttgcctt
tttgtcttattgacaatgtcttttgtcttacagaagctttgcaattttat
gaggtcccatttattgattactgatcttacagcacaggccattgatgttc
tgtttaggaatttttcccctgtgcccatatcttctaggctcttccacact
ttctctcttgcgtgcgcccaactgaccaggaagaacgacgctgcaacagg
atctttctgcacacgtttattcagtcctgtttcttcttgtttatatctcc
cttgtttatatctcccccgaaccctgggcctctcactccttttatactct
ctctcatccacgcaccgcaggccacgccccctcgccagtcacgaggcttc
agctaatcagggcagcaggggcatatctccaccaaattggattcacctgt
atcctggtacacctgcgcagcactcaagatgtttgtgtcttatatgagga
agtcaggtgcaagtcatatgacttagctgcagtccctggcgcctttggga
ctgccgccacacccgctccccacatttctcctctataagtttcagtgttt
ctggttttatgtgtagttagacttgagctttgtacaaggagataagaatg
ggtttatatgaaatacaaataatctaagttttcattatagagtgataaaa
cctcatgactttaatatctcgattatagagtttccttatgagacagcaga
attaccagtttagttatttcaaattctgtaactacttcacccagtacact
gccttactttgaaaagttaatagatttgggagatttcatccatcctgaac
tctattagattccctggtgcctgtgtatctcccttctccagatgattcta
aaagcaatggtcattatgagggatatcacacacatccctgtttgggataa
aaaccatggtgtacagatagctcatcacattcctaggagttctttaaaga
atattgtcaggataatatcggattaggttttatatagttacattttctgc
gttcaagacatagaggttattt
gaattctttctaaaatgttcttgctttaccttttcctcagtccatcagag
caagcacgacagcggtacttcttcaataaggagacttgacatttgaaatc
attcctacatccacgggctgcagaatgactctggtgtgaacaatactgtt
aacaacattaatcttgttgtacatccctccaccagaactcccagaactcc
tgggtaaccaggtgtattgtcaatgacagtgatattttgaaagaagtttt
ttttttttttcttttctgagtgctaagtctcaacagggggcttaaaatat
tcagcaaaccatgttgtaaacagatgtgctgtctctgggctttgttgctc
catttatagaggactagcagagaagattaggctcattcttaggggcccta
gatttttggaaaggtaaatgagcataggctttaatttaaaatcaccaggt
tcattagcctcaaacaagtcagtctgtactctgaagctttgaagccgagc
atagactctccctaagttacgaatatttgatactgcatcatctaaggatg
ctggtaaggctttcattctccacaaagctgtctttgttgctactttgtat
tgaggtatggtctgttgctatgctaatgctaaatactggcccttaagatc
ctcggggatgagggaatcctcatgtacactaagtgatgctgtgtaatctt
gctccttagttaaaaactattggttaaataaagatgccaacatcctatag
ctgggaagaagagagatgggaggggtttcagttgccaagcttgggatctg
agacagacaataaggaagtgagagagagaagagaagagagaagacatcat
gagataggtagattgtgagaacatagccatgaggggcagcctgttggtgt
aggagtggcccatgaggaacatggcaagttatatctcagatgatggacag
gaagtagaacaacttagcataagagtttgatatctgctgctgtgctctag
tgctatataagtataaagttgcaatttttatttgtaactaaatgatttaa
agcggggtatacccataatgtttagataatatttatacggatttctcagg
ttaagtttcaatgcatccaagtccgtgcataccgcctcattcgctatcca
cgccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70158126_70159049
seq2: B6Ng01-266J17.b_301_1218

seq1  TAGGAATTTTTCCCCTGTGCCCATATCTTCTAGGCTCTTCCACACTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTTTTCCCCTGTGCCCATATCTTCTAGGCTCTTCCACACTTTCT  50

seq1  CTCTTGCGTGCGCCCAACTGACCAGGAAGAACGACGCTGCAACAGGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCGTGCGCCCAACTGACCAGGAAGAACGACGCTGCAACAGGATCT  100

seq1  TTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTGTTTATATCTCCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTGTTTATATCTCCCTTG  150

seq1  TTTATATCTCCCCCGAACCCTGGGCCTCTCACTCCTTTTATACTCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCTCCCCCGAACCCTGGGCCTCTCACTCCTTTTATACTCTCTCT  200

seq1  CATCCACGCACCGCAGGCCACGCCCCCTCGCCAGTCACGAGGCTTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACGCACCGCAGGCCACGCCCCCTCGCCAGTCACGAGGCTTCAGCT  250

seq1  AATCAGGGCAGCAGGGGCATATCTCCACCAAATTGGATTCACCTGTATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGGCAGCAGGGGCATATCTCCACCAAATTGGATTCACCTGTATCC  300

seq1  TGGTACACCTGCGCAGCACTCAAGATGTTTGTGTCTTATATGAGGAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACACCTGCGCAGCACTCAAGATGTTTGTGTCTTATATGAGGAAGTC  350

seq1  AGGTGCAAGTCATATGACTTAGCTGCAGTCCCTGGCGCCTTTGGGACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCAAGTCATATGACTTAGCTGCAGTCCCTGGCGCCTTTGGGACTGC  400

seq1  CGCCACACCCGCTCCCCACATTTCTCCTCTATAAGTTTCAGTGTTTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCACACCCGCTCCCCACATTTCTCCTCTATAAGTTTCAGTGTTTCTGG  450

seq1  TTTTATGTGTAGTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTGTAGTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGGTT  500

seq1  TATATGAAATACAAATAATCTAAGTTTTCATTATAGAGTGATAAAACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAATACAAATAATCTAAGTTTTCATTATAGAGTGATAAAACCTC  550

seq1  ATGACTTTAATATCTCGATTATAGAGTTTCCTTATGAGACAGCAGAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTAATATCTCGATTATAGAGTTTCCTTATGAGACAGCAGAATTA  600

seq1  CCAGTTTAGTTATTTCAAATTCTGTAACTACTTCACCCAGTACACTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTAGTTATTTCAAATTCTGTAACTACTTCACCCAGTACACTGCCT  650

seq1  TACTTTGAAAAGTTAATAGATTTGGGAGATTTCATCCATCCTGAACTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGAAAAGTTAATAGATTTGGGAGATTTCATCCATCCTGAACTCTA  700

seq1  TAAGATTCCCTGGTGCCCTGTGTATCTCCCTTCTTCCAGATGATTCTAAA  750
      | ||||||||||||| ||||||||||||||||| ||||||||||||||||
seq2  TTAGATTCCCTGGTG-CCTGTGTATCTCCCTTC-TCCAGATGATTCTAAA  748

seq1  AGCAATGGTCATTATGAGGGATATCACACACATCCCTGTTT-GGAT-AAA  798
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  AGCAATGGTCATTATGAGGGATATCACACACATCCCTGTTTGGGATAAAA  798

seq1  ACCATGGTGGTACAGATAGGCTCATCACATTCCTA-GAGTCCTTTAAAGA  847
      |||||||| ||||||||| |||||||||||||||| |||| |||||||||
seq2  ACCATGGT-GTACAGATA-GCTCATCACATTCCTAGGAGTTCTTTAAAGA  846

seq1  TATTTGTCCAAGATAATATTCAGAATTAGTCTTTATATAGTACCATTTTC  897
         |||| || ||||||||   | |||||  ||||||||||  |||||| 
seq2  ATATTGT-CAGGATAATAT--CGGATTAGGTTTTATATAGTTACATTTT-  892

seq1  CTGCCGTTCAAAGACATAGA-GTTATTT  924
      ||| ||||| |||||||||| |||||||
seq2  CTG-CGTTC-AAGACATAGAGGTTATTT  918