BAC Information

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BAC

Clone NameB6Ng01-267O19
Chromosome17 (Build37)
Map Location 16,722,721 - 16,723,837
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665017, LOC100041775, 5830433I10Rik, Chd1, Rgmb, LOC100041365, Eif3s6-ps3, LOC100041383, LOC100041394, LOC213781
Downstream geneLOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267O19.bB6Ng01-267O19.g
ACCGA070920GA070921
length1,110408
definitionB6Ng01-267O19.b B6Ng01-267O19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttggtaaaagttttctgtcatcaaagcaacgatgaaagactt
ggagcattatcataagatctatcacttttattacaaaagcattaagtata
aaatcttatgcaccatctgttatccatctgtctatcatcaatcaatctat
ttgtctatctatatctattgtcatgtatctattacttatcatttatctat
atattattatgcatctattacttatcatttatttatcagttatattaata
tatcatctatttttatcaatctatcatatgattgtcatctatctattgtc
tatcatttacaaagcaattatttatctgtgaattataaaagtcagtaata
agttgggttaaaacatttgataggttccagaatatgtaaatactcctaga
tgcaaaaccttctcattgtatttatgatcaggtatgacatagctggtcaa
gtagctcagtgcctactcttgaagtgaagttttaagatatgaatgagaaa
aaaaagtggctgttcactttctaccacatttatgcacagattgattgcaa
ttttagttccatagtttttaactgttagaaacttcaattgaatgtttttt
ttcctaaattgcacctttcaacacttgattaggtagtctgcatccattat
aagaaaaagtagggtgtatacttcaacttataagcataaacaaggacttt
ctgaacagtagtgctgaaacaagaccaacaattgactgatggggcctcat
gccccatcaactaaaaagcttttgtacagcaaaggagacaatcagggaag
tgaggtgtaagcctatggaatgggaaaacaaaacaaaacataccaaaacg
tttccaactatgcatctggccaaggatttatgtgtaaaataaacaaaaag
ttaaaaaaagaatattagaaaagcaaacagtcaattaaaagaacccgggt
gtaaatctaacagagatctcaaaagaatagagcagcaatgaccttgtttg
agaagctatgcagtagtgtcacatcctttgagcatatgccagatgtggtg
gagtggtgtgtgatggtttggtatagcttggcccgggagtgcccatgagg
aaggtgtatc
cccagaagaggacgaggaaagattggaagagtcaaaggagatggatggta
gtaggagagcatgatcctgaatcaactaagcaaggagaatatgagctcat
agaggctgaagcacagagcttacattgatctataccaggtcctgtacata
aatattatagctgttagcttcatgttttatgggatgactaactatgagaa
tgaatgtgtctctgactcttttacctgctcttggaaatcttccttccatt
ggcttgccatgtccaacttcaatatgaaatattttgtttcatcttattat
ttttattttgtcttgtcatgtttggttgttatctctttgaaacctgtttt
tttttctaataagatagagaaagagagtagatccagaggggaggggaggt
ggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_16722721_16723837
seq2: B6Ng01-267O19.b_47_1156 (reverse)

seq1  GATACACC-TCCTCATAGTGCCACTCCCTGGGCCAAGCATATA-CAAACC  48
      |||||||| |||||||   | ||||||| ||||||||| |||| ||||||
seq2  GATACACCTTCCTCAT--GGGCACTCCC-GGGCCAAGC-TATACCAAACC  46

seq1  ATCACACACCACTCCACCACATCTTGGCATATGCTCAAAGGATGTGACAC  98
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  ATCACACACCACTCCACCACATC-TGGCATATGCTCAAAGGATGTGACA-  94

seq1  CTACTGCATAGCTTCTCAAACAAGGTCATTGCTGCTCTATTCTTTTGAGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCATAGCTTCTCAAACAAGGTCATTGCTGCTCTATTCTTTTGAGA  144

seq1  TCTCTGTTAGATTTTACACCCGGGTTCTTTTAATTGGACTGTTTGCTTTT  198
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  TCTCTGTTAGA-TTTACACCCGGGTTCTTTTAATT-GACTGTTTGCTTTT  192

seq1  CTAATATTCTTTTTTTTAACTTTTTGTTTATTTTACACATAAATCCTTGG  248
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTC-TTTTTTTAACTTTTTGTTTATTTTACACATAAATCCTTGG  241

seq1  CCAGATGCATAGTTGGAAACGTTTTGGTATGTTTTGTTTTGTTTTCCCAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCATAGTTGGAAACGTTTTGGTATGTTTTGTTTTGTTTTCCCAT  291

seq1  TCCATAGGCTTACACCTCACTTCCCTGATTGTCTCCTTTGCTGTACAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGGCTTACACCTCACTTCCCTGATTGTCTCCTTTGCTGTACAAAA  341

seq1  GCTTTTTAGTTGATGGGGCATGAGGCCCCATCAGTCAATTGTTGGTCTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTAGTTGATGGGGCATGAGGCCCCATCAGTCAATTGTTGGTCTTG  391

seq1  TTTCAGCACTACTGTTCAGAAAGTCCTTGTTTATGCTTATAAGTTGAAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCACTACTGTTCAGAAAGTCCTTGTTTATGCTTATAAGTTGAAGT  441

seq1  ATACACCCTACTTTTTCTTATAATGGATGCAGACTACCTAATCAAGTGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCCTACTTTTTCTTATAATGGATGCAGACTACCTAATCAAGTGTT  491

seq1  GAAAGGTGCAATTTAGGAAAAAAAACATTCAATTGAAGTTTCTAACAGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTGCAATTTAGGAAAAAAAACATTCAATTGAAGTTTCTAACAGTT  541

seq1  AAAAACTATGGAACTAAAATTGCAATCAATCTGTGCATAAATGTGGTAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATGGAACTAAAATTGCAATCAATCTGTGCATAAATGTGGTAGA  591

seq1  AAGTGAACAGCCACTTTTTTTTCTCATTCATATCTTAAAACTTCACTTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACAGCCACTTTTTTTTCTCATTCATATCTTAAAACTTCACTTCA  641

seq1  AGAGTAGGCACTGAGCTACTTGACCAGCTATGTCATACCTGATCATAAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGGCACTGAGCTACTTGACCAGCTATGTCATACCTGATCATAAAT  691

seq1  ACAATGAGAAGGTTTTGCATCTAGGAGTATTTACATATTCTGGAACCTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAGAAGGTTTTGCATCTAGGAGTATTTACATATTCTGGAACCTAT  741

seq1  CAAATGTTTTAACCCAACTTATTACTGACTTTTATAATTCACAGATAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTTTAACCCAACTTATTACTGACTTTTATAATTCACAGATAAAT  791

seq1  AATTGCTTTGTAAATGATAGACAATAGATAGATGACAATCATATGATAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTTGTAAATGATAGACAATAGATAGATGACAATCATATGATAGA  841

seq1  TTGATAAAAATAGATGATATATTAATATAACTGATAAATAAATGATAAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAAAATAGATGATATATTAATATAACTGATAAATAAATGATAAGT  891

seq1  AATAGATGCATAATAATATATAGATAAATGATAAGTAATAGATACATGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGCATAATAATATATAGATAAATGATAAGTAATAGATACATGAC  941

seq1  AATAGATATAGATAGACAAATAGATTGATTGATGATAGACAGATGGATAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATATAGATAGACAAATAGATTGATTGATGATAGACAGATGGATAA  991

seq1  CAGATGGTGCATAAGATTTTATACTTAATGCTTTTGTAATAAAAGTGATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTGCATAAGATTTTATACTTAATGCTTTTGTAATAAAAGTGATA  1041

seq1  GATCTTATGATAATGCTCCAAGTCTTTCATCGTTGCTTTGATGACAGAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTATGATAATGCTCCAAGTCTTTCATCGTTGCTTTGATGACAGAAA  1091

seq1  ACTTTTACCAAATGAATTC  1117
      |||||||||||||||||||
seq2  ACTTTTACCAAATGAATTC  1110