BAC Information

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BAC

Clone NameB6Ng01-268N11
Chromosome17 (Build37)
Map Location 16,863,332 - 16,864,575
singlet/doubletsinglet
Overlap geneLOC665072
Upstream geneChd1, Rgmb, LOC100041365, Eif3s6-ps3, LOC100041383, LOC100041394, LOC213781, LOC100041407
Downstream geneEG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268N11.bB6Ng01-268N11.g
ACCGA071595GA071596
length1,0541,163
definitionB6Ng01-268N11.b B6Ng01-268N11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggtttcttcatcaatggtaattgaaagtttggctgggtata
gtagcctgggctggcatttgtgttctcttagtgtctgtataacatctgtc
caggatcttctgggtttcatagtctctggtgaaaagtctggtgtaattct
aataggcctgcctttatatgttacttgaccgttttcccttactgctttta
atattctacctttatttagtgtatttattgttctgattattatgtgtcgg
gtggaatttcttttctggtccagtctatttggagttctgtagtcttcttg
tatgttcatgggcatttctttctttaagtttgggaagttttgttctataa
ttttgttgaagatatttgctggccctttaagttgaaaatcttcattctca
tctactcctattatccgtaggtttggtcttctcattgtgtcctggatttc
ctggatgttttgaattaggatctttttgcattttgcattttctttgattg
ttgtgccgattttctctatggaatcttctgcacctgaaattctctcttcc
atctcttgtattctgttgccgatgcttgaatctatggttccagatttctt
tcctagggtttctatctccagcattgcctccctttgggttttctttattg
tatctacttccctttttaggtctagtatggttatgttcatttccatcacc
tgtttcctgtttttctgtaaggacttctacctgtttggttgtggtttcct
gtttttctttaaggacttgtaactctttagcagtgttctcctgtatttct
ttaagtgagttactaaagtccttcttgatgtcctctaccatcatcatgag
atatgcttttaaattcgggtctaggttttcgggtttgttggggtgccagg
actgggtgaggtgggagtgctgcattctgatgatggtgagtggtctggat
tctgtagtaagatcttacattgtcttggccatctgtaatctctggagtta
tttgtataagttgtttcttggttatatcttgtccttcttgttaatctgta
gcct
gaattcaagaagttagattccagagaaccaaataatcctatttaaaaata
gataacaggttctatcatcaacctgtggcagcaagatatctcacaggaaa
ttctcagctcccacgcatgggtccttgggcttcttgctttgaaggtgaag
cacttggcaatatgggaaattgaagagcttccctaagaatgaccccttca
tgcctgttcacctcacaacctttctagggtacaaggctggcatgacccac
atcatccgggaagtacacaggccagaatctaaggtgaacaagaacgaagt
cgcggaggctatgaacattgtagaaaccccacccatagtggttgtgggca
ttgtaggatatgttgaaaccccaggagtcctccagaccttcaagactata
ttttctgaacatatcagtgattagtgcaaaaggcggttctataagaactg
gcacaaatctaagaagaagcctttcatcgagtactgtaagaaatggcagg
atgacacaggcaagaagcagctggcgaagaactttggcagcataaagaag
tactgtcaggtcatctgcataattgcgcacactcagatgtgtctgcttcc
tctgagccagaagaaggtgcacttgatggagatccaggtgaatggaggca
ctgtggctgagaagctagactaagcccaagaaagcctggagcaacaggtt
cccgtgaaccaggtgtttgggcaggatgggatgattgacatcattggcat
gacaaaaggcaaagggtacaaaagggtgaacagtcagcatacaaagaaac
tgctgtggaagacccattgaggtctgtgcaaagttgcctgtattggagcc
ctgcccatttagccttctctgaggctccagctgggcaaaaggttaccatc
actgaacagagattaacaagaatatttacaagactggttcactgctacct
catcaggatggtaaactgatcagacaagcatctaccaactatgacctgtc
tacaagagcatcaacccactgggtggctttgtccatatggtgagggtgac
atgatttcatttattctcaagcctatatggtgcacccagaagagtgcctt
actgttcgtagttctgctggttcattgacaaataccttcaggttggtcca
tggtctcaattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_16863332_16864575
seq2: B6Ng01-268N11.g_66_1228

seq1  GAATTCAAGAAGTTAGATTCCAGAGAACCAAATAATCCTATTTAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAGTTAGATTCCAGAGAACCAAATAATCCTATTTAAAAATA  50

seq1  GATAACAGGTTCTATCATCAACCTGTGGCAGCAAGATATCTCACAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAGGTTCTATCATCAACCTGTGGCAGCAAGATATCTCACAGGAAA  100

seq1  TTCTCAGCTCCCACGCATGGGTCCTTGGGCTTCTTGCTTTGAAGGTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCTCCCACGCATGGGTCCTTGGGCTTCTTGCTTTGAAGGTGAAG  150

seq1  CACTTGGCAATATGGGAAATTGAAGAGCTTCCCTAAGAATGACCCCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGCAATATGGGAAATTGAAGAGCTTCCCTAAGAATGACCCCTTCA  200

seq1  TGCCTGTTCACCTCACAACCTTTCTAGGGTACAAGGCTGGCATGACCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTCACCTCACAACCTTTCTAGGGTACAAGGCTGGCATGACCCAC  250

seq1  ATCATCCGGGAAGTACACAGGCCAGAATCTAAGGTGAACAAGAACGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCGGGAAGTACACAGGCCAGAATCTAAGGTGAACAAGAACGAAGT  300

seq1  CGCGGAGGCTATGAACATTGTAGAAACCCCACCCATAGTGGTTGTGGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGAGGCTATGAACATTGTAGAAACCCCACCCATAGTGGTTGTGGGCA  350

seq1  TTGTAGGATATGTTGAAACCCCAGGAGTCCTCCAGACCTTCAAGACTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGATATGTTGAAACCCCAGGAGTCCTCCAGACCTTCAAGACTATA  400

seq1  TTTTCTGAACATATCAGTGATTAGTGCAAAAGGCGGTTCTATAAGAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAACATATCAGTGATTAGTGCAAAAGGCGGTTCTATAAGAACTG  450

seq1  GCACAAATCTAAGAAGAAGCCTTTCATCGAGTACTGTAAGAAATGGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAATCTAAGAAGAAGCCTTTCATCGAGTACTGTAAGAAATGGCAGG  500

seq1  ATGACACAGGCAAGAAGCAGCTGGCGAAGAACTTTGGCAGCATAAAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACAGGCAAGAAGCAGCTGGCGAAGAACTTTGGCAGCATAAAGAAG  550

seq1  TACTGTCAGGTCATCTGCATAATTGCGCACACTCAGATGTGTCTGCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCAGGTCATCTGCATAATTGCGCACACTCAGATGTGTCTGCTTCC  600

seq1  TCTGAGCCAGAAGAAGGTGCACTTGATGGAGATCCAGGTGAATGGAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCAGAAGAAGGTGCACTTGATGGAGATCCAGGTGAATGGAGGCA  650

seq1  CTGTGGCTGAGAAGCTAGACTAAGCCCAAGAAAGCCTGGAGCAACAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTGAGAAGCTAGACTAAGCCCAAGAAAGCCTGGAGCAACAGGTT  700

seq1  CCCGTGAACCAGGTGTTTGGGCAGGATGGGATGATTGACATCATTGGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGAACCAGGTGTTTGGGCAGGATGGGATGATTGACATCATTGGCAT  750

seq1  GACAAAAGGCAAAGGGTACAAAAGGGTGAACAGTCAGCATACAAAGAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGGCAAAGGGTACAAAAGGGTGAACAGTCAGCATACAAAGAAAC  800

seq1  TGCTGTGGAAGACCCATTGAGGTCTGTGCAAAGTTGCCTGTATTGGAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGGAAGACCCATTGAGGTCTGTGCAAAGTTGCCTGTATTGGAGCC  850

seq1  CTGCCCATTTAGCCTTCTCTGAGGCTCCAGCTGGGCAAAAAGGTTACCAT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGCCCATTTAGCCTTCTCTGAGGCTCCAGCTGGGC-AAAAGGTTACCAT  899

seq1  CACTGAACAGAGATTAACAAGAATATTTACAAGACTGG-TCACTGCTACC  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CACTGAACAGAGATTAACAAGAATATTTACAAGACTGGTTCACTGCTACC  949

seq1  TCATCAAGGATGGTAAACTGATCAAGAACAAGGCATCTACCAACTATGAC  999
      ||||| ||||||||||||||||||   |||| ||||||||||||||||||
seq2  TCATC-AGGATGGTAAACTGATCA--GACAA-GCATCTACCAACTATGAC  995

seq1  CTGTCTAACAAGAGCATCAACCCACTGGGTGGCTTTGTCCATTATGGTGA  1049
      |||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGTCT-ACAAGAGCATCAACCCACTGGGTGGCTTTGTCCA-TATGGTGA  1043

seq1  GGGTGACCAATGATTTCA-TTATTCTCAAAGGCTATATGGTGGCAACCAA  1098
      |||||||  ||||||||| |||||||| ||| ||||||||||   ||| |
seq2  GGGTGAC--ATGATTTCATTTATTCTC-AAGCCTATATGGTG--CACCCA  1088

seq1  GAAGAAAGTG-CTTACTGTTCGTAAGTCCTTGCTGGTGTTCATTGAC-AA  1146
      ||||  |||| |||||||||||||  ||  |||||  |||||||||| ||
seq2  GAAG--AGTGCCTTACTGTTCGTAGTTC--TGCTG--GTTCATTGACAAA  1132

seq1  TACCTCCAAGTTTGGCCATGGTC---ATTTCCAGACCATGGAGGAGAAGA  1193
      ||||| || ||| | ||||||||   ||| |                   
seq2  TACCTTCAGGTTGGTCCATGGTCTCAATTCC-------------------  1163

seq1  AAGCACTCATGGGACTGATAGAACCTAGTGGGGAAACCCCCACTCAATTC  1243
                                                        
seq2  --------------------------------------------------  1163

seq1  C  1244
       
seq2  -  1163