BAC Information

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BAC

Clone NameB6Ng01-275D15
Chromosome17 (Build37)
Map Location 90,712,030 - 90,905,940
singlet/doubletdoublet
Overlap geneNrxn1
Upstream geneLOC100043904, LOC100043906
Downstream geneEG668871, LOC668872, LOC627235
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275D15.bB6Ng01-275D15.g
ACCGA076324GA076325
length538657
definitionB6Ng01-275D15.b B6Ng01-275D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,712,030 - 90,712,573)(90,905,284 - 90,905,940)
sequence
caagctcaaacaaatgtgaattaagcacatctgatcttttctgttcacta
tttaatgctatacaaattaagtaaaatcttctcttactgggaggtaaagt
ttaggtgagtattcatgacaggatctcccgagttacatctctggagttcc
attcctagaaatgaattgctatcattagatgtctactgcatttcttgaat
gttgggtggaagcatctggagtttagatgacattgcagcatgatagttgg
cttcacagaagtggatgctcacagtcagctattgcatggatcacagggcc
cccaatggaggagctagagaaagcacccaaggagctggggggatctgcaa
cactagaggtggaacaacaatatgaactaaccagtaccccggagctcttg
actctagctgcatatgtatcagaagatggcctagtcggccatcagtggaa
agagaggcccattggttgtgcaaactttatatgcctcagtacaggggaac
gccaaggccaaaatgtgggagtgggtgggtaggggagt

gaattcttattgaatggtgaatctaaaattcacctggaggcactgagtca
ttaactgtgtttgtgggttgtgtttagagcccaatgcttgggcctttgcc
tccaataatacaccatttctcctaaataatgatttcagaggtagaggagg
cagaatcagttactggatatcatccacaggaaagacatgcaaacactatg
tgaagtgaaaattgaatgtttaagtagacatgctagtacctggcatgtca
ttttatccacttcctgcttttccattcatgctgccttcacgtctggctcc
tcagagatgagggatcttcctgactgcagagtcaaacagcagtctatgca
aagatgcaaagatgaagcttctcaccggaaagatgtggtccttgaagatg
gtggcatgctgccaccaagtgcttgagatccaaggatatatttatcaaaa
ctcttcatggcacagcatcttttttctctgtttttcattttttgcttttt
atgttttcattaaaggttcagacagagtataaaaggccctaagtccctgt
ttctaagggcttacatctctctctctctccccacccctttctttcccccg
cctctgtgagagaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_90712030_90712573
seq2: B6Ng01-275D15.b_42_585

seq1  GAATTCCAAGCTCAAACAAATGTGAATTAAGCACATCTGATCTTTTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTCAAACAAATGTGAATTAAGCACATCTGATCTTTTCTGT  50

seq1  TCACTATTTAATGCTATACAAATTAAGTAAAATCTTCTCTTACTGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTTAATGCTATACAAATTAAGTAAAATCTTCTCTTACTGGGAGG  100

seq1  TAAAGTTTAGGTGAGTATTCATGACAGGATCTCCCGAGTTACATCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTAGGTGAGTATTCATGACAGGATCTCCCGAGTTACATCTCTGG  150

seq1  AGTTCCATTCCTAGAAATGAATTGCTATCATTAGATGTCTACTGCATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCATTCCTAGAAATGAATTGCTATCATTAGATGTCTACTGCATTTC  200

seq1  TTGAATGTTGGGTGGAAGCATCTGGAGTTTAGATGACATTGCAGCATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGTTGGGTGGAAGCATCTGGAGTTTAGATGACATTGCAGCATGAT  250

seq1  AGTTGGCTTCACAGAAGTGGATGCTCACAGTCAGCTATTGCATGGATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTTCACAGAAGTGGATGCTCACAGTCAGCTATTGCATGGATCAC  300

seq1  AGGGCCCCCAATGGAGGAGCTAGAGAAAGCACCCAAGGAGCTGGGGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCCCAATGGAGGAGCTAGAGAAAGCACCCAAGGAGCTGGGGGGAT  350

seq1  CTGCAACACTAGAGGTGGAACAACAATATGAACTAACCAGTACCCCGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACACTAGAGGTGGAACAACAATATGAACTAACCAGTACCCCGGAG  400

seq1  CTCTTGACTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGACTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGCCATCA  450

seq1  GTGGAAAGAGAGGCCCATTGGTTGTGCAAACTTTATATGCCTCAGTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAGAGAGGCCCATTGGTTGTGCAAACTTTATATGCCTCAGTACAG  500

seq1  GGGAACGCCAAGGCCAAAATGTGGGAGTGGGTGGGTAGGGGAGT  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACGCCAAGGCCAAAATGTGGGAGTGGGTGGGTAGGGGAGT  544


seq1: chr17_90905284_90905940
seq2: B6Ng01-275D15.g_62_718 (reverse)

seq1  GCACACACACACACACACACACACACACACACACACACACACATTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACACACACACACACACACACACACACACACACACACATTCTCTC  50

seq1  ACAGAGGCGGGGGAAAGAAAGGGGTGGGGAGAGAGAGAGAGATGTAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGCGGGGGAAAGAAAGGGGTGGGGAGAGAGAGAGAGATGTAAGCC  100

seq1  CTTAGAAACAGGGACTTAGGGCCTTTTATACTCTGTCTGAACCTTTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAACAGGGACTTAGGGCCTTTTATACTCTGTCTGAACCTTTAATG  150

seq1  AAAACATAAAAAGCAAAAAATGAAAAACAGAGAAAAAAGATGCTGTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAAAAAGCAAAAAATGAAAAACAGAGAAAAAAGATGCTGTGCCA  200

seq1  TGAAGAGTTTTGATAAATATATCCTTGGATCTCAAGCACTTGGTGGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTTTTGATAAATATATCCTTGGATCTCAAGCACTTGGTGGCAGC  250

seq1  ATGCCACCATCTTCAAGGACCACATCTTTCCGGTGAGAAGCTTCATCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACCATCTTCAAGGACCACATCTTTCCGGTGAGAAGCTTCATCTTT  300

seq1  GCATCTTTGCATAGACTGCTGTTTGACTCTGCAGTCAGGAAGATCCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTGCATAGACTGCTGTTTGACTCTGCAGTCAGGAAGATCCCTCA  350

seq1  TCTCTGAGGAGCCAGACGTGAAGGCAGCATGAATGGAAAAGCAGGAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGGAGCCAGACGTGAAGGCAGCATGAATGGAAAAGCAGGAAGTG  400

seq1  GATAAAATGACATGCCAGGTACTAGCATGTCTACTTAAACATTCAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATGACATGCCAGGTACTAGCATGTCTACTTAAACATTCAATTTT  450

seq1  CACTTCACATAGTGTTTGCATGTCTTTCCTGTGGATGATATCCAGTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCACATAGTGTTTGCATGTCTTTCCTGTGGATGATATCCAGTAACT  500

seq1  GATTCTGCCTCCTCTACCTCTGAAATCATTATTTAGGAGAAATGGTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGCCTCCTCTACCTCTGAAATCATTATTTAGGAGAAATGGTGTAT  550

seq1  TATTGGAGGCAAAGGCCCAAGCATTGGGCTCTAAACACAACCCACAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAGGCAAAGGCCCAAGCATTGGGCTCTAAACACAACCCACAAACA  600

seq1  CAGTTAATGACTCAGTGCCTCCAGGTGAATTTTAGATTCACCATTCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATGACTCAGTGCCTCCAGGTGAATTTTAGATTCACCATTCAATA  650

seq1  AGAATTC  657
      |||||||
seq2  AGAATTC  657


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