BAC Information

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BAC

Clone NameB6Ng01-278J08
Chromosome17 (Build37)
Map Location 38,957,767 - 39,130,757
singlet/doubletdoublet
Overlap geneLOC100043297
Upstream geneOlfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043300, EG668200, LOC672857, LOC627695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278J08.bB6Ng01-278J08.g
ACCGA078790GA078791
length1,1591,110
definitionB6Ng01-278J08.b B6Ng01-278J08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,957,767 - 38,958,529)(39,129,636 - 39,130,757)
sequence
gaattcaaataaacagtaacccatagactgggaaaatacctttacctacc
ctacatctagtagagggttaatatcaaatatatacaaagaactcaagaag
ttagacatcagagtactgaataaccctattaataaatgggatacaacaat
aaccagagatttcaaaactgaggaataacaaacagctgagaggcacttaa
agaaatgttcaacatccctagtcatgagggaaatgcaaatcaaaatgacc
ctgagattctatcttacaccagtcagaatgtctaagatcaaaagctcagg
taataggggatgctggtgagggtatggagaaagagaaacactcctccaaa
actgatgggattgcaagtttgcacaaccactctataaatcagtttgttgc
ttcctcagaaaactgtaaatagttcaacctgagaacccatctataccact
cctgagcatatacccaaaagatattccaatgtataacaaggacccatgat
tcattatgttcataacagttttatttgtaataaccaaaaactagaagcaa
gctaggtgtccctcaaatgaagaatggatagagaaaatgtggtatattta
cacagcagagtactactcagatttaaaaacaatgaattcatgaaattctt
aggcaaatggatggaactcgaaaattgattgttaagagctcaatgggggc
tttttggggaatttgaaattttaaatataatcatgtagattagtgtgcaa
tataaaattttagcttctgaagattcatagggaagttcaagactctgtaa
gggcatatattcacacacacacacacacacacacacacacacacacacac
tctcacacacacacacacacacacacacacacacatattaattaacttcc
aaattaaaggttttcataagcttatttagcaatcctaagtttggttaccc
tctatggtgtaaccacataatttcctccttctgaaccaaaaccaattctt
gaaataatccatccctattaatacccttcaattcttcataccatggtgca
tttcaccaccctattatttattatttcactgaatttcaaggttccgggaa
ttcaaatcattttccatcctgcatttaagtggtctttccttccttcctac
acctctctt
gaattcttagtaagcaataaattctgattttgtacacagatgagttcacc
tgttctactggttcaatattcaaataaaatttggttttcttcttcactaa
tactctagaagcaaattcatctcagaaaatacagaaatacacagcagtgt
cattaactaacctcctggttataattctatgatgccattcttctaaatga
aggtattaaacgcattaaattatttcaatcaaagaattagatacagtact
attgattctattgaacaggaaaagctaagagaattaaagataatgctgaa
taaaagcctatgtagttgaagtgaataaaatattttttgagattttcaaa
caaatttaaataatgaaaacggtagtacttaagtggttattattgctttt
tgtaaacaatttaaatttggaagtgtaaatgaagacactgtatttgactc
attttctccaaattatatttccatccaaataccttccttttcttcaaatc
gttcgttgaacttaatgtaataaattatggcatattgcagatcactatga
acaacttatatatgcatttatttgtaaactttcaggcacaaaaatcattg
cattgggtgtcattatgatagttaaaccctggcaaagaaaactgaatttc
taactaaggaactgtatgtttagagcattcattgttttctttcttgttta
taaagatgcactgttatttgtagcaagccataaggaataattttctgctt
aaaatacagaaccatctgaaagacccaacaagcagctgaagtgtcagatg
cagatattcgcacccaaccaatggacagaagtagctgacctctcttgttt
aattagggaagattgagagaaactgaggaaaagagtgatactgcaggaga
tcaaagtctcaattaatctggatccacgagagctctcaaataatggccca
ccaaaaatgcagtctacacagctgatatgagccccaacaacacataacag
tagagacttcaggtctgtgtcattcagagacctaatcttcagagatgagc
ctccaggagtttagagtcaaggtgcggagggggatgggacatccacgtgg
gaaaggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38957767_38958529
seq2: B6Ng01-278J08.b_436_1205

seq1  CAGTTTGTTGCTTCCTCAGAAAACTGTAAATAGTTCAACCTGAGAACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGTTGCTTCCTCAGAAAACTGTAAATAGTTCAACCTGAGAACCCA  50

seq1  TCTATACCACTCCTGAGCATATACCCAAAAGATATTCCAATGTATAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACCACTCCTGAGCATATACCCAAAAGATATTCCAATGTATAACAA  100

seq1  GGACCCATGATTCATTATGTTCATAACAGTTTTATTTGTAATAACCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCATGATTCATTATGTTCATAACAGTTTTATTTGTAATAACCAAAA  150

seq1  ACTAGAAGCAAGCTAGGTGTCCCTCAAATGAAGAATGGATAGAGAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAGCAAGCTAGGTGTCCCTCAAATGAAGAATGGATAGAGAAAATG  200

seq1  TGGTATATTTACACAGCAGAGTACTACTCAGATTTAAAAACAATGAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATATTTACACAGCAGAGTACTACTCAGATTTAAAAACAATGAATTC  250

seq1  ATGAAATTCTTAGGCAAATGGATGGAACTCGAAAATTGATTGTTAAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCTTAGGCAAATGGATGGAACTCGAAAATTGATTGTTAAGAGC  300

seq1  TCAATGGGGGCTTTTTGGGGAATTTGAAATTTTAAATATAATCATGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGGGGCTTTTTGGGGAATTTGAAATTTTAAATATAATCATGTAGA  350

seq1  TTAGTGTGCAATATAAAATTTTAGCTTCTGAAGATTCATAGGGAAGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGCAATATAAAATTTTAGCTTCTGAAGATTCATAGGGAAGTTCA  400

seq1  AGACTCTGT-AGGGCATATATTCACACACACACACACACACACACACACA  449
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGTAAGGGCATATATTCACACACACACACACACACACACACACA  450

seq1  CACACACACACTCTCACACACACACACACACACACACACACACACATATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACTCTCACACACACACACACACACACACACACACACATATT  500

seq1  AATTAACTTCCAAATTAAAGGTTTTCATAAGCTTATTTAGCAATCCTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATTAACTTCCAAATTAAAGGTTTTCATAAGCTTATTTAGCAATCCTAAG  550

seq1  TTTGGTTA-CCTCAAT-GTGT-ACCACAT-ATTTCCTCCTTCTTGAACCA  595
      |||||||| |||| || |||| ||||||| |||||||||||| |||||||
seq2  TTTGGTTACCCTCTATGGTGTAACCACATAATTTCCTCCTTC-TGAACCA  599

seq1  AA--CCATTCTTGAAAT-ATCAATCCCTATT-ATACCC-TCAATTCTTTC  640
      ||  | ||||||||||| ||| ||||||||| |||||| ||||||| |||
seq2  AAACCAATTCTTGAAATAATCCATCCCTATTAATACCCTTCAATTC-TTC  648

seq1  ATACCAT-GTGCATTCTAC--ACCTATATTTTATTATTTTCACTG-ATTT  686
      ||||||| |||||||  ||   |||||  ||||||| |||||||| ||||
seq2  ATACCATGGTGCATTTCACCACCCTATTATTTATTA-TTTCACTGAATTT  697

seq1  CAAGGTTTC-GGTATTCAATATCATTTTCCCATTCTGCATTTAAGTTGTC  735
      ||||||| | || |||||| |||||||| |||| |||||||||||| |||
seq2  CAAGGTTCCGGGAATTCAA-ATCATTTT-CCATCCTGCATTTAAGTGGTC  745

seq1  TTTTCCTTCCCTTTCTTTCACCTCTCTT  763
       |||||||||  ||| | ||||||||||
seq2  -TTTCCTTCC--TTCCTACACCTCTCTT  770

seq1: chr17_39129636_39130757
seq2: B6Ng01-278J08.g_68_1177 (reverse)

seq1  CCTTCCTGTCTCCACGTGGATGTCCCCATCCCCCTCCGCACCTGAACTCT  50
      ||||||| || |||||||||||| |||||||||||||||||||  |||||
seq2  CCTTCCTTTC-CCACGTGGATGT-CCCATCCCCCTCCGCACCTTGACTCT  48

seq1  AAACTCCCTGGAGCCTCCAATCTCTTGAGGATTAGGTCTCTGAATGAACA  100
      ||||| ||||||| |||  ||||| ||| ||||||||||||||||| |||
seq2  AAACT-CCTGGAGGCTC--ATCTC-TGAAGATTAGGTCTCTGAATG-ACA  93

seq1  CAGACCTGGAAGTCCTCTACTG-TATGTGTGTTGGGGGCTTCATATCAGC  149
      ||||||| ||||| |||||||| |||||||  | ||||| ||||||||||
seq2  CAGACCT-GAAGT-CTCTACTGTTATGTGTTGTTGGGGC-TCATATCAGC  140

seq1  TGGTGTAGACTGCATTTTTGGTGGGCCATTATTTGAGAGCTCTCGTGGAT  199
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GTGTAGACTGCATTTTTGGTGGGCCATTATTTGAGAGCTCTCGTGGAT  189

seq1  CCAGATTAATTGAGACTTTTGATCCTCCTGCAGTATCACTCTTTTCCTCA  249
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  CCAGATTAATTGAGAC-TTTGAT-CTCCTGCAGTATCACTCTTTTCCTCA  237

seq1  GTTTCTCTCAATCTTCCCTAATTAAACAAGAGAGGTCAGCTACTTCTGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCAATCTTCCCTAATTAAACAAGAGAGGTCAGCTACTTCTGTC  287

seq1  CATTGGTTGGGTGCGAATATCTGCATCTGACACTTCAGCTGCTTGTTGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTTGGGTGCGAATATCTGCATCTGACACTTCAGCTGCTTGTTGGG  337

seq1  TCTTTCAGATGGTTCTGTATTTTAAGCAGAAAATTATTCCTTATGGCTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGATGGTTCTGTATTTTAAGCAGAAAATTATTCCTTATGGCTTG  387

seq1  CTACAAATAACAGTGCATCTTTATAAACAAGAAAGAAAACAATGAATGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAATAACAGTGCATCTTTATAAACAAGAAAGAAAACAATGAATGCT  437

seq1  CTAAACATACAGTTCCTTAGTTAGAAATTCAGTTTTCTTTGCCAGGGTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACATACAGTTCCTTAGTTAGAAATTCAGTTTTCTTTGCCAGGGTTT  487

seq1  AACTATCATAATGACACCCAATGCAATGATTTTTGTGCCTGAAAGTTTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCATAATGACACCCAATGCAATGATTTTTGTGCCTGAAAGTTTAC  537

seq1  AAATAAATGCATATATAAGTTGTTCATAGTGATCTGCAATATGCCATAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGCATATATAAGTTGTTCATAGTGATCTGCAATATGCCATAAT  587

seq1  TTATTACATTAAGTTCAACGAACGATTTGAAGAAAAGGAAGGTATTTGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACATTAAGTTCAACGAACGATTTGAAGAAAAGGAAGGTATTTGGA  637

seq1  TGGAAATATAATTTGGAGAAAATGAGTCAAATACAGTGTCTTCATTTACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATATAATTTGGAGAAAATGAGTCAAATACAGTGTCTTCATTTACA  687

seq1  CTTCCAAATTTAAATTGTTTACAAAAAGCAATAATAACCACTTAAGTACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAATTTAAATTGTTTACAAAAAGCAATAATAACCACTTAAGTACT  737

seq1  ACCGTTTTCATTATTTAAATTTGTTTGAAAATCTCAAAAAATATTTTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTTTCATTATTTAAATTTGTTTGAAAATCTCAAAAAATATTTTATT  787

seq1  CACTTCAACTACATAGGCTTTTATTCAGCATTATCTTTAATTCTCTTAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAACTACATAGGCTTTTATTCAGCATTATCTTTAATTCTCTTAGC  837

seq1  TTTTCCTGTTCAATAGAATCAATAGTACTGTATCTAATTCTTTGATTGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTTCAATAGAATCAATAGTACTGTATCTAATTCTTTGATTGAA  887

seq1  ATAATTTAATGCGTTTAATACCTTCATTTAGAAGAATGGCATCATAGAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTAATGCGTTTAATACCTTCATTTAGAAGAATGGCATCATAGAAT  937

seq1  TATAACCAGGAGGTTAGTTAATGACACTGCTGTGTATTTCTGTATTTTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCAGGAGGTTAGTTAATGACACTGCTGTGTATTTCTGTATTTTCT  987

seq1  GAGATGAATTTGCTTCTAGAGTATTAGTGAAGAAGAAAACCAAATTTTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAATTTGCTTCTAGAGTATTAGTGAAGAAGAAAACCAAATTTTAT  1037

seq1  TTGAATATTGAACCAGTAGAACAGGTGAACTCATCTGTGTACAAAATCAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTGAACCAGTAGAACAGGTGAACTCATCTGTGTACAAAATCAG  1087

seq1  AATTTATTGCTTACTAAGAATTC  1122
      |||||||||||||||||||||||
seq2  AATTTATTGCTTACTAAGAATTC  1110