BAC Information

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BAC

Clone NameB6Ng01-279A06
Chromosome17 (Build37)
Map Location 37,471,958 - 37,473,049
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102
Downstream geneOlfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279A06.bB6Ng01-279A06.g
ACCGA079107GA079108
length1,080484
definitionB6Ng01-279A06.b B6Ng01-279A06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtccctgaatttgttttggacatattagttgataacatggact
taggacacactctaatgtgccttgtatgtaactaggtatataaatatgtt
tatactacctatgtttagtataactagtaattacacttgttcatctgtca
actcatattagttggatgaatatcaatatgcttgcttattttgaggaatt
attaatactatggttgctcagttgaaaagttaggtgcaaagctactaaaa
attccagaggcaaaacatttcttttatatgtgattctgattcagttaaac
ttgagcttttgatggtgagtggataagtttttattttaaaatttttatta
gtgattattttttttgagttcagatctcctgtagcttaagctgtccttga
attcctcatgttcttgcctccacctctcaactgctgggattatagatatt
tactaccacacccagctttataaacagtttagacaatatactttattaag
taaatatcaaatatatatcagcataatgttgttgagttattttacatctg
actgcctatactcttcaaaatctctttagtaacttcttttgtctcaacaa
cattctgagtgttgagtaacttagctaccaccattcaagcaatggaaaac
agtccaaggtgagagtgtttcttgtggtaagatgttttcaaaccaatttt
atttattaaatacttatatttaatatttatactcatatcatgtgtttata
tctaattcacctcttattccttattatccaactcctctgctatatacttt
tcatgtttactgtcctactcctgtgaaggaatagatgtctgtatacagtg
tttgctatacattagacatgagtacacagttgtgcacatgaactcacaat
ggttgggactgaattacagtcttcaaagattaagccagacaaaaatccat
gaatttccacccctagatgagtggcactaaatagctactgcagagaagtc
ttatttttcttgaggatgtggcatgctctagtgtatgagtgcacacagtt
acaaatgatcatgtctattcatgaattttt
ttgtttgctttttgtggttttggtttttcatttgtgttttgtttattttt
tgttttacattttctatttctgtttttttttgttgtttgttgttttttgt
tggtgttttgggttttggtttcttttctttgtggttttgtttttgttttt
gttttatgtttttcgttttgttgttcgttttgttttgttttgtttttgtt
tgttctttgtaggtttagtctgtttttttgttcccgttttacttcgattt
tgtattccagacccaaactccaataactcttttccgtaaatatcttaaaa
acctgggacagagaaattacccaccctccacactttgtttgaccagtcta
tatctgaattgaaggctcattattttatttgtcaaggaccccaattatgc
attcacactgacagggaggtcatcctacatcgtagccttatgctctttct
tcgcatcactgaggatagacaaccccccctcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37471958_37473049
seq2: B6Ng01-279A06.b_46_1125 (reverse)

seq1  AAAAATTCATTGAATAGACACTGAATCCATTTTGTACTGTGTGCACTCAT  50
      ||||||||| |||||||||| |||   |||||   |||||||||||||||
seq2  AAAAATTCA-TGAATAGACA-TGA--TCATTTGTAACTGTGTGCACTCAT  46

seq1  ACACTAGAGCATGGCCCACATTCTTCAAGAAAA--TAGACTCTCCTTCT-  97
      |||||||||||||  ||||| || |||||||||   |||     ||||| 
seq2  ACACTAGAGCATG--CCACA-TCCTCAAGAAAAATAAGA-----CTTCTC  88

seq1  TCCAGTAGCTATTTAGTGCCACTTCATCTAGGGGTGGAAATTCATGGATT  147
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGCAGTAGCTATTTAGTGCCAC-TCATCTAGGGGTGGAAATTCATGGATT  137

seq1  TTTGTCTGGCTTAATCTTTTGAAAGACTGTAATTCAGTCCCAACCATTGT  197
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  TTTGTCTGGCTTAATCTTT--GAAGACTGTAATTCAGTCCCAACCATTGT  185

seq1  GAGTTCATGTGCACAACTGTGTACTCATGTCTAATGTATAGCAAACACTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCATGTGCACAACTGTGTACTCATGTCTAATGTATAGCAAACACTG  235

seq1  TATACAGACATCTATTCCTTCACAGGAGTAGGACAGTAAACATGAAAAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGACATCTATTCCTTCACAGGAGTAGGACAGTAAACATGAAAAGT  285

seq1  ATATAGCAGAGGAGTTGGATAATAAGGAATAAGAGGTGAATTAGATATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCAGAGGAGTTGGATAATAAGGAATAAGAGGTGAATTAGATATAA  335

seq1  ACACATGATATGAGTATAAATATTAAATATAAGTATTTAATAAATAAAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGATATGAGTATAAATATTAAATATAAGTATTTAATAAATAAAAT  385

seq1  TGGTTTGAAAACATCTTACCACAAGAAACACTCTCACCTTGGACTGTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGAAAACATCTTACCACAAGAAACACTCTCACCTTGGACTGTTTT  435

seq1  CCATTGCTTGAATGGTGGTAGCTAAGTTACTCAACACTCAGAATGTTGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTTGAATGGTGGTAGCTAAGTTACTCAACACTCAGAATGTTGTT  485

seq1  GAGACAAAAGAAGTTACTAAAGAGATTTTGAAGAGTATAGGCAGTCAGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAAGAAGTTACTAAAGAGATTTTGAAGAGTATAGGCAGTCAGAT  535

seq1  GTAAAATAACTCAACAACATTATGCTGATATATATTTGATATTTACTTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATAACTCAACAACATTATGCTGATATATATTTGATATTTACTTAA  585

seq1  TAAAGTATATTGTCTAAACTGTTTATAAAGCTGGGTGTGGTAGTAAATAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATATTGTCTAAACTGTTTATAAAGCTGGGTGTGGTAGTAAATAT  635

seq1  CTATAATCCCAGCAGTTGAGAGGTGGAGGCAAGAACATGAGGAATTCAAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATCCCAGCAGTTGAGAGGTGGAGGCAAGAACATGAGGAATTCAAG  685

seq1  GACAGCTTAAGCTACAGGAGATCTGAACTCAAAAAAAATAATCACTAATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTTAAGCTACAGGAGATCTGAACTCAAAAAAAATAATCACTAATA  735

seq1  AAAATTTTAAAATAAAAACTTATCCACTCACCATCAAAAGCTCAAGTTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAAAATAAAAACTTATCCACTCACCATCAAAAGCTCAAGTTTA  785

seq1  ACTGAATCAGAATCACATATAAAAGAAATGTTTTGCCTCTGGAATTTTTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATCAGAATCACATATAAAAGAAATGTTTTGCCTCTGGAATTTTTA  835

seq1  GTAGCTTTGCACCTAACTTTTCAACTGAGCAACCATAGTATTAATAATTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTTGCACCTAACTTTTCAACTGAGCAACCATAGTATTAATAATTC  885

seq1  CTCAAAATAAGCAAGCATATTGATATTCATCCAACTAATATGAGTTGACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATAAGCAAGCATATTGATATTCATCCAACTAATATGAGTTGACA  935

seq1  GATGAACAAGTGTAATTACTAGTTATACTAAACATAGGTAGTATAAACAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACAAGTGTAATTACTAGTTATACTAAACATAGGTAGTATAAACAT  985

seq1  ATTTATATACCTAGTTACATACAAGGCACATTAGAGTGTGTCCTAAGTCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATACCTAGTTACATACAAGGCACATTAGAGTGTGTCCTAAGTCC  1035

seq1  ATGTTATCAACTAATATGTCCAAAACAAATTCAGGGACTGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATCAACTAATATGTCCAAAACAAATTCAGGGACTGAATTC  1080