BAC Information

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BAC

Clone NameB6Ng01-279O24
Chromosome17 (Build37)
Map Location 58,672,683 - 58,673,772
singlet/doubletsinglet
Overlap genenone
Upstream geneEG224916, Cntnap5c, LOC674419
Downstream geneLOC620408, EG545216, LOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279O24.bB6Ng01-279O24.g
ACCGA079791GA079792
length3161,082
definitionB6Ng01-279O24.b B6Ng01-279O24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctgctcttcctgggactggacacagagcttagcccagcatcaacaaatc
ccatggttccatcactgcataaaacatggaccaagcaggctttgttcaat
tgcaaccccacactcaagagttgaaaaaaatgatgagcagttcacagtca
ttggttgtatagtgagtaatgacagtccaagatatgtgagcccttttttt
tctccagaagaataggaggaggagggaggggggaggagaatcgagagata
tccccagagagagataaagagagacagagagagaaaaagaaatgtaatat
ttcttctttagccttg

gaattcaacatggttttccatgctgaaaaaagaaggtgctacagtatctg
ttggtagtcacaagggaattaataaataatacaagaaaagtaacagcatt
ctcctagtcacatgtatagtccatctaaactcacagtaaagtgtggaata
tttctagagaatgcctgtgctggtattttttctcattgtgtgttcactga
actagaaatgatctgttatatatccccagcaatgagatcttgttccagag
tccagaggtcctttctggagaaatatgaagggatcagagattcttctcca
tttgagaaagccgtgcgagtagacactggtgtgtgtgtgtgtgtgtatgc
attgctaagattaagcctaggtccatatgaaataaataatgcattatatc
aacttttaatgctaggataaggctcattttgaaatagaaaatactgttag
agaagagacctaggtttaactctttcaaataaggccagctattcaggacc
ttgaacaacaggtgggccttcagagtcctgcatgtgtgagggctctctat
acctcctactttaggagaatcaaaattgattttctgactgtagggttttc
agaagtcagtaaacaatgaggaatcttcaagaattctttataggaagagt
agaggacaggagataatgtctgtgtgagtatttatttgttttaaaggaaa
gcaccagaaaaaaatgtgaaattaatgaagtttctggataagcttgtgct
ttaagtcccatcatctaatttaaacaaacaccccgaatgcttctaattac
aaaatccaccacggaatgatgaagactgctgagtctttagaaatgtccat
tttctttccttaatattttttctatttgtacacactaattaaacctaatt
aaagtatcacagagataacaaaccctaatgaacatttattttggatgtta
tttttttaagtgatatccaaagtgagcttaggacagatactgaagatgca
gttcaaggtcaagtcaaggtgtgttaaatgaaattttgaagaagatcttt
tctctattatggtacgatggaaaattggtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_58672683_58673772
seq2: B6Ng01-279O24.g_62_1143

seq1  GAATTCAACATGGTTTTCCATGCTGAAAAAAGAAGGTGCTACAGTATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATGGTTTTCCATGCTGAAAAAAGAAGGTGCTACAGTATCTG  50

seq1  TTGGTAGTCACAAGGGAATTAATAAATAATACAAGAAAAGTAACAGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGTCACAAGGGAATTAATAAATAATACAAGAAAAGTAACAGCATT  100

seq1  CTCCTAGTCACATGTATAGTCCATCTAAACTCACAGTAAAGTGTGGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGTCACATGTATAGTCCATCTAAACTCACAGTAAAGTGTGGAATA  150

seq1  TTTCTAGAGAATGCCTGTGCTGGTATTTTTTCTCATTGTGTGTTCACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGAGAATGCCTGTGCTGGTATTTTTTCTCATTGTGTGTTCACTGA  200

seq1  ACTAGAAATGATCTGTTATATATCCCCAGCAATGAGATCTTGTTCCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAATGATCTGTTATATATCCCCAGCAATGAGATCTTGTTCCAGAG  250

seq1  TCCAGAGGTCCTTTCTGGAGAAATATGAAGGGATCAGAGATTCTTCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGTCCTTTCTGGAGAAATATGAAGGGATCAGAGATTCTTCTCCA  300

seq1  TTTGAGAAAGCCGTGCGAGTAGACACTGGTGTGTGTGTGTGTGTGTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAAGCCGTGCGAGTAGACACTGGTGTGTGTGTGTGTGTGTATGC  350

seq1  ATTGCTAAGATTAAGCCTAGGTCCATATGAAATAAATAATGCATTATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAGATTAAGCCTAGGTCCATATGAAATAAATAATGCATTATATC  400

seq1  AACTTTTAATGCTAGGATAAGGCTCATTTTGAAATAGAAAATACTGTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAATGCTAGGATAAGGCTCATTTTGAAATAGAAAATACTGTTAG  450

seq1  AGAAGAGACCTAGGTTTAACTCTTTCAAATAAGGCCAGCTATTCAGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGACCTAGGTTTAACTCTTTCAAATAAGGCCAGCTATTCAGGACC  500

seq1  TTGAACAACAGGTGGGCCTTCAGAGTCCTGCATGTGTGAGGGCTCTCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAACAGGTGGGCCTTCAGAGTCCTGCATGTGTGAGGGCTCTCTAT  550

seq1  ACCTCCTACTTTAGGAGAATCAAAATTGATTTTCTGACTGTAGGGTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTACTTTAGGAGAATCAAAATTGATTTTCTGACTGTAGGGTTTTC  600

seq1  AGAAGTCAGTAAACAATGAGGAATCTTCAAGAATTCTTTATAGGAAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCAGTAAACAATGAGGAATCTTCAAGAATTCTTTATAGGAAGAGT  650

seq1  AGAGGACAGGAGATAATGTCTGTGTGAGTATTTATTTGTTTTAAAGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACAGGAGATAATGTCTGTGTGAGTATTTATTTGTTTTAAAGGAAA  700

seq1  GCACCAGAAAAAAATGTGAAATTAATGAAGTTTCTGGATAAGCTTGTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGAAAAAAATGTGAAATTAATGAAGTTTCTGGATAAGCTTGTGCT  750

seq1  TTAAGTCCCATCATCTAATTTAAACAAACACCCCGAATGCTTCTAATTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCCCATCATCTAATTTAAACAAACACCCCGAATGCTTCTAATTAC  800

seq1  AAAATCCACCACGGAATGATGAAGACTGCTGAGTCTTTAGAAATGTCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCACCACGGAATGATGAAGACTGCTGAGTCTTTAGAAATGTCCAT  850

seq1  TTTCTTTCCTTAATATTTTTTCTATTTGTACACACTAATTAAACCTAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCTTAATATTTTTTCTATTTGTACACACTAATTAAACCTAATT  900

seq1  AAAGTAATCACAGAGATAACAAACCCTAATGAACATTTATTTTGGATGT-  949
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAGT-ATCACAGAGATAACAAACCCTAATGAACATTTATTTTGGATGTT  949

seq1  -ATTTTTTAAGTGATATCCAAAGTGAGCTAAGGACAGATAACTGAAAGAT  998
        ||||||||||||||||||||||||||| ||||||||| |||| |||||
seq2  ATTTTTTTAAGTGATATCCAAAGTGAGCTTAGGACAGAT-ACTG-AAGAT  997

seq1  GCAGTTTCCAAGGTCAAAGTCAAAGTGTGTTAAATGAAATTTTTGAAAGA  1048
      ||||||  ||||||| ||||||| ||||||||||||||| |||||||   
seq2  GCAGTT--CAAGGTC-AAGTCAAGGTGTGTTAAATGAAA-TTTTGAA--G  1041

seq1  AAGATC-TTTCTCTATTATGGGTAAGGATAGAATATTGGTGAT  1090
      |||||| ||||||||||||||   | ||| ||| |||||||||
seq2  AAGATCTTTTCTCTATTATGG--TACGATGGAAAATTGGTGAT  1082


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