BAC Information

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BAC

Clone NameB6Ng01-284E22
Chromosome17 (Build37)
Map Location 29,535,362 - 29,536,455
singlet/doubletsinglet
Overlap genenone
Upstream geneFkbp5, 4930511I11Rik, Gm749, Clps, Tmhs, Srpk1, Slc26a8, Mapk14, LOC100043318, Mapk13, Brpf3, Pnpla1, 4930539E08Rik, Pxt1, Kctd20, Stk38, Sfrs3, LOC100042815, Cdkn1a, 9830134C10Rik, LOC100043341, Cpne5, Ppil1, BC004004, LOC100043348, Pi16, Mtch1, Fgd2
Downstream genePim1, 4933413N12Rik, Tbc1d22b, Rnf8, 1300018I05Rik, Mdga1, LOC100042885, LOC100042888, Zfand3, Btbd9, EG623169
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284E22.bB6Ng01-284E22.g
ACCGA083042GA083043
length1,0821,171
definitionB6Ng01-284E22.b B6Ng01-284E22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgtttcctttctctttcctttcccttttcaatattagacttta
aacagattatcattaaaaacagtgcaaggccgacgatacagcgcgccgca
gtgcaagtcggaaaagttaaaaaaagaagaagaacaagaaaaagaaaaaa
ggtgatattaacaccccaaaccagtgtttggtgaataatcacttcaggac
cgggccagtagctccgtggcagggagcgtgcctggtattcaaaaggctga
ggttaaacccctgcagtaaacaaaactcgctgggggttctttgagacaca
gtcccagtaattagactagcttgggacttccgaccctctggcccacacct
taaatgctgggatccgtattcaccaccaatactgggttcacttggcaagg
ggtctgccatctggacttcatgcatgctaaccagcagccatacctgcagt
ccttcatgcacatacccgggggtgtttgttcgttggatcgaactcgggct
tggtggcaaaaagccttacctgccttacccgctgagccatcttgccagcc
cctttttgcccttttttggggtacttttgagacaaggtctcactccatag
ctctgactgccctggaatttgctctaaagatcaagagaccctccaacctg
tcatcctcctgctcctgcctccggaattacagcgatcccacgtgtgcgat
acctggcgataacattaataaagttcatttgcttttccctgcctatgtgt
ctgcctggcacgggacattaaatccaattgctattgcagagtgagcatgg
acctttgacattacgatacataggaaaactaaagtgaaggcccacacagt
gaccctagcgagataggagaaagcgtcagccagcgggatttacacccctt
cctgcttcagacttgcagctcattatttatttatttagcttctctaaata
ccccagggaagggctgtaggccttaagtgctgcctgcattcagaagctcc
gccccagggaactctagaagggactccactggtcaacggcatgggtgtga
atactcgggtgtgttaacaactgcttcctgaa
gaattctctatctagatctgcacctcattttttgatcgagccattttctt
ggtatttgatagtttgttgagtgctttctatatgctggatgttagccctc
tatgggatgtgccactggtctcttgtcccattctgctgtctgaatgacag
tgtcctttgccctacagaagcgtctcattttcataagatcccacttatga
gctgttggtcttagtgcctgtgctagcagtgttctgttcaaaaagtttcc
ctgtgccaaggagttcagagctattccagtttcctcttctacgaagtttg
gtggacttgaatctatgtggaggtctttgatctgtttggagttttgtgca
cagtgataagcgtagctctatttggtttcttctacacggagctgtccggt
ttgaccagcacggcttgttaaagatgctgtctgtcttttttccagtgtgt
ttctggctttttcatttaaaatatcaggcatccataggtgtgtggcatta
tgctttattcttcaatttgactctactgatcaacatgtctgtttttgtgc
taatatattattacggctctacagtacatcttgaaactgggaatggcgat
atctcctgcagttcctgtattattcagggtcgcttcagctatcttggctt
tttttttttttcacttccatataaactgaaaattgacctttccatgaaga
agtgtgttagaattttaatagggattgcattagccctgtagattgctttt
gatatgatgtctattttttactttccatattcttcaatttctttcttcag
tgtcataaaggttttttttttaagatttatttactttatgtatgtgagta
cactgtcactgtcttcagacacaccaaaagggggcatcaagatctccttt
gcagatggttgtgagccaccaatgtgggtgcttggaaattggaactcaga
cctcttgggagagcagtcagtactctaacagctgagcctttcttctcagc
ccatcataaagtttttactatacaagttcttcacttggctgctagagtgc
ccaaagattatttatactcttcgagcctgttgtgaaggcactgttcttaa
tttctattccagtctttgtgtagaagctactgattttgtggttaaattct
ttgtttccgagcgactcgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_29535362_29536455
seq2: B6Ng01-284E22.b_46_1127

seq1  GAATTCACGTTTCCTTTCTCTTTCCTTTCCCTTTTCAATATTAGACTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTTTCCTTTCTCTTTCCTTTCCCTTTTCAATATTAGACTTTA  50

seq1  AACAGATTATCATTAAAAACAGTGCAAGGCCGACGATACAGCGCGCCGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTATCATTAAAAACAGTGCAAGGCCGACGATACAGCGCGCCGCA  100

seq1  GTGCAAGTCGGAAAAGTTAAAAAAAGAAGAAGAACAAGAAAAAGAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGTCGGAAAAGTTAAAAAAAGAAGAAGAACAAGAAAAAGAAAAAA  150

seq1  GGTGATATTAACACCCCAAACCAGTGTTTGGTGAATAATCACTTCAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATATTAACACCCCAAACCAGTGTTTGGTGAATAATCACTTCAGGAC  200

seq1  CGGGCCAGTAGCTCCGTGGCAGGGAGCGTGCCTGGTATTCAAAAGGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCAGTAGCTCCGTGGCAGGGAGCGTGCCTGGTATTCAAAAGGCTGA  250

seq1  GGTTAAACCCCTGCAGTAAACAAAACTCGCTGGGGGTTCTTTGAGACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAACCCCTGCAGTAAACAAAACTCGCTGGGGGTTCTTTGAGACACA  300

seq1  GTCCCAGTAATTAGACTAGCTTGGGACTTCCGACCCTCTGGCCCACACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTAATTAGACTAGCTTGGGACTTCCGACCCTCTGGCCCACACCT  350

seq1  TAAATGCTGGGATCCGTATTCACCACCAATACTGGGTTCACTTGGCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTGGGATCCGTATTCACCACCAATACTGGGTTCACTTGGCAAGG  400

seq1  GGTCTGCCATCTGGACTTCATGCATGCTAACCAGCAGCCATACCTGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCCATCTGGACTTCATGCATGCTAACCAGCAGCCATACCTGCAGT  450

seq1  CCTTCATGCACATACCCGGGGGTGTTTGTTCGTTGGATCGAACTCGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATGCACATACCCGGGGGTGTTTGTTCGTTGGATCGAACTCGGGCT  500

seq1  TGGTGGCAAAAAGCCTTACCTGCCTTACCCGCTGAGCCATCTTGCCAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCAAAAAGCCTTACCTGCCTTACCCGCTGAGCCATCTTGCCAGCC  550

seq1  CCTTTTTGCCCTTTTTTGGGGTACTTTTGAGACAAGGTCTCACTCCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTGCCCTTTTTTGGGGTACTTTTGAGACAAGGTCTCACTCCATAG  600

seq1  CTCTGACTGCCCTGGAATTTGCTCTAAAGATCAAGAGACCCTCCAACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTGCCCTGGAATTTGCTCTAAAGATCAAGAGACCCTCCAACCTG  650

seq1  TCATCCTCCTGCTCCTGCCTCCGGAATTACAGCGATCCCACGTGTGCGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTCCTGCTCCTGCCTCCGGAATTACAGCGATCCCACGTGTGCGAT  700

seq1  ACCTGGCGATAACATTAATAAAGTTCATTTGCTTTTCCCTGCCTATGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCGATAACATTAATAAAGTTCATTTGCTTTTCCCTGCCTATGTGT  750

seq1  CTGCCTGGCACGGGACATTAAATCCAATTGCTATTGCAGAGTGAGCATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGCACGGGACATTAAATCCAATTGCTATTGCAGAGTGAGCATGG  800

seq1  ACCTTTGACATTACGATACATAGGAAAACTAAGGTGAAGGCCCACACAGT  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCTTTGACATTACGATACATAGGAAAACTAAAGTGAAGGCCCACACAGT  850

seq1  GACCCTAGCGAGATAGGAGAAAGCGTCAGCCAGCGGGATTTACACCCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTAGCGAGATAGGAGAAAGCGTCAGCCAGCGGGATTTACACCCCTT  900

seq1  CCTGCTTCAGACTTGCAGGCTCATTATTTATTTATTTAGCTTCTCTAAAT  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTGCTTCAGACTTGCA-GCTCATTATTTATTTATTTAGCTTCTCTAAAT  949

seq1  AACCCCAGGGAAGGGCTGTAGGCCTTAAGTGCTGCCTTGCATTTCAGAAG  1000
       ||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  -ACCCCAGGGAAGGGCTGTAGGCCTTAAGTGCTGCC-TGCA-TTCAGAAG  996

seq1  GCTCGCCCCAGGGAACTTCCTAGAAAGGGACT-CACTGGGTCAAAGGGCA  1049
         ||||||||||||||  |||| |||||||| |||| |||| || ||||
seq2  CTCCGCCCCAGGGAACT--CTAG-AAGGGACTCCACT-GGTC-AACGGCA  1041

seq1  TGGGGGTGTGAATACTCGGTGTGTTTAAACAAACTGCTTTCTGAA  1094
      |  |||||||||||||||| |||| | ||| |||||||| |||||
seq2  T--GGGTGTGAATACTCGG-GTGTGTTAAC-AACTGCTTCCTGAA  1082