BAC Information

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BAC

Clone NameB6Ng01-284M01
Chromosome17 (Build37)
Map Location 92,594,504 - 92,595,622
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627235, LOC100043741, LOC100043742, EG640442
Downstream geneLOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284M01.bB6Ng01-284M01.g
ACCGA083377GA083378
length8571,110
definitionB6Ng01-284M01.b B6Ng01-284M01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ccaaattaacaaaaccagaaatgaaaaaggaaacataacagcagaatcta
agaaaattcaagaaatcatcagatcctgctacaaaaccagaaaatctaga
tgaaatgaatgactttgtagacagataccacatatgaaatttaagtcaag
agcagctaaagtatgtaaataggctcatatcacctaagaaaatagaagtc
ataaaaacctcccaaccaaaaaaataaaaataaaaaaagccaagaaccag
atggctttagtgcagaattctaccagaccttcaaagaactaataccaaca
ctcctcaaactattctataaaatagaaacagaaggaacactaattaattc
actttattaacccacaattactctgatacttaaaccacaccagaactcca
ctcccctgccctaaaacaaacaaacaaacaaacaaacaaacaaacaaaca
aacagaaattcagaccaattgcgtttacagatatcagtacaaacatactc
cattcttgcagagcaaatccaagaacacatcaaaacgatcattcaccatg
ataaattaggtgtcataccaggatgcaatgttttttcaatgtactgaaac
atattaatgtaatccactataaaaacaaactcaaagtggaaaaaaaaaac
aacatgatcatttcattagatgctggaaaaagaatttgaacaaaaataca
acacccccttctgtaaagtattggaagaagatcagaatttcagtccatgc
attaaacatactaaaggcaattatacaggcaaatcacagccaatatccaa
tcaatgcagacatcctgagccattctcacttaatcttagggcaccagcag
agaaagc
gaattcacagcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctcttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagtgg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgactctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgatgtagctggatataaaattatctcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggcaacaacacccttctcaatagtcacaagtaatataaaatatcttggcg
tgactttttaatctttactatgacttttaaccccggtgttcatgatctgt
ggcactatacagagagaaattatggccagtaaatgtacaacagatgtcct
acctcctgaaatgaatttaatctccagtctcccatgattactaaataaat
aaaaaaaaacttaaagagaatcatttctctgcatgtgtaaataatttccc
tgagttctcttaatctcaagagattttttctaattttattttttgctatt
tatttatatatcctataaaatggtaatttatattgtcaattgaactgaaa
gcatggccagaattggaggttctgaattcataatcactcatgtggcagtc
agctggtggcttctgatacttatccatgttttcctagtgtgatatttcat
caaataaaaactggcctttgcaagtcaaggagctgatacaagttgcatta
ttttaaataaaatcctaattatgcattctttctattaccttatttattat
gaggatttttatttcacccttattagagacatttgcggggtcattacctg
agtatgattattgagatcatgttacaaatttgtacatgttatatttataa
ggatgaaaagatagtgttaaatatttcaggacttatgttctattgttata
atgatatcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92594504_92595622
seq2: B6Ng01-284M01.g_65_1174 (reverse)

seq1  TTGATATCATTATAAACAATAGAACATAA-TTCTGAAATATTTTAACACC  49
      ||||||||||||| ||||||||||||||| | |||||||| ||||||| |
seq2  TTGATATCATTAT-AACAATAGAACATAAGTCCTGAAATA-TTTAACA-C  47

seq1  TATCTTTTCATCC-TATAAATATAACATGTACAAATTTTGTAACATTGAT  98
      ||||||||||||| ||||||||||||||||||||| ||||||||| ||||
seq2  TATCTTTTCATCCTTATAAATATAACATGTACAAA-TTTGTAACA-TGAT  95

seq1  CTCAATAATTCATACCTTCAGGTAATGACCCCGCAAATGTCTTCTTAAAT  148
      |||||||| ||||||  |||||||||||||||||||||||| |||  |||
seq2  CTCAATAA-TCATAC--TCAGGTAATGACCCCGCAAATGTC-TCT--AAT  139

seq1  AAGGGTTGAAAT-AAAATCCTCATAATAAATAAGGTAATAGAAAGAATGC  197
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGGG-TGAAATAAAAATCCTCATAATAAATAAGGTAATAGAAAGAATGC  188

seq1  ATAATTAGGATTTTATTTAAAATAATGCAACTTGTATCAGCTCCTTGACT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAGGATTTTATTTAAAATAATGCAACTTGTATCAGCTCCTTGACT  238

seq1  TGCAAAGGCCAGTTTTTATTTGATGAAATATCACACTAGGAAAACATGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGGCCAGTTTTTATTTGATGAAATATCACACTAGGAAAACATGGA  288

seq1  TAAGTATCAGAAGCCACCAGCTGACTGCCACATGAGTGATTATGAATTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATCAGAAGCCACCAGCTGACTGCCACATGAGTGATTATGAATTCA  338

seq1  GAACCTCCAATTCTGGCCATGCTTTCAGTTCAATTGACAATATAAATTAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCCAATTCTGGCCATGCTTTCAGTTCAATTGACAATATAAATTAC  388

seq1  CATTTTATAGGATATATAAATAAATAGCAAAAAATAAAATTAGAAAAAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATAGGATATATAAATAAATAGCAAAAAATAAAATTAGAAAAAAT  438

seq1  CTCTTGAGATTAAGAGAACTCAGGGAAATTATTTACACATGCAGAGAAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGATTAAGAGAACTCAGGGAAATTATTTACACATGCAGAGAAAT  488

seq1  GATTCTCTTTAAGTTTTTTTTTATTTATTTAGTAATCATGGGAGACTGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCTTTAAGTTTTTTTTTATTTATTTAGTAATCATGGGAGACTGGA  538

seq1  GATTAAATTCATTTCAGGAGGTAGGACATCTGTTGTACATTTACTGGCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAATTCATTTCAGGAGGTAGGACATCTGTTGTACATTTACTGGCCA  588

seq1  TAATTTCTCTCTGTATAGTGCCACAGATCATGAACACCGGGGTTAAAAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTCTCTGTATAGTGCCACAGATCATGAACACCGGGGTTAAAAGT  638

seq1  CATAGTAAAGATTAAAAAGTCACGCCAAGATATTTTATATTACTTGTGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAAAGATTAAAAAGTCACGCCAAGATATTTTATATTACTTGTGAC  688

seq1  TATTGAGAAGGGTGTTGTTGCCCTAATTTCTTTCTCAGCCTGTTTATTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGAAGGGTGTTGTTGCCCTAATTTCTTTCTCAGCCTGTTTATTCT  738

seq1  TTGTATAGAGAAAGGCCATTGACTTGTTTGAGATAATTTTATATCCAGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGAGAAAGGCCATTGACTTGTTTGAGATAATTTTATATCCAGCT  788

seq1  ACATCACCGAAGCTGTTTATCAGGTTTAGGAGTTCTCTGGTGGAATTTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACCGAAGCTGTTTATCAGGTTTAGGAGTTCTCTGGTGGAATTTTT  838

seq1  AGAGTCACTTATATATACTATCATATCATCTGCAAAAAGTGATATTTTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCACTTATATATACTATCATATCATCTGCAAAAAGTGATATTTTGA  888

seq1  CTTCCTCTTTTCCAATTTGTATCCACTTGATCTCCTTTTGTTGTCGAATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTTTCCAATTTGTATCCACTTGATCTCCTTTTGTTGTCGAATT  938

seq1  GCTCTGGCTAATACTTCAAGTACTATGTTGAAGAGGTAGGGAGAAAGTGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGCTAATACTTCAAGTACTATGTTGAAGAGGTAGGGAGAAAGTGG  988

seq1  GCAGCCTTGTCTAGTCCCTGATTTTAGTGGGATTGCTTCCAGCTTCTCTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTGTCTAGTCCCTGATTTTAGTGGGATTGCTTCCAGCTTCTCTC  1038

seq1  CATTTACTTTGATGTTGGCTACTGGTTTGCTGTAGATTGCTTTTATCATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTTTGATGTTGGCTACTGGTTTGCTGTAGATTGCTTTTATCATG  1088

seq1  TTTAGGTATGGGCTGTGAATTC  1119
      ||||||||||||||||||||||
seq2  TTTAGGTATGGGCTGTGAATTC  1110