BAC Information

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BAC

Clone NameB6Ng01-286F03
Chromosome17 (Build37)
Map Location 70,704,130 - 70,878,083
singlet/doubletdoublet
Overlap geneLOC623112, LOC623143, Dlgap1
Upstream geneZfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630
Downstream geneTgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286F03.bB6Ng01-286F03.g
ACCGA084548GA084549
length1,044823
definitionB6Ng01-286F03.b B6Ng01-286F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,877,046 - 70,878,083)(70,704,130 - 70,704,941)
sequence
gaattcttcaagtgttgcaagacactggaacccttaaaggaattttaaag
ggggaatacttctctctatacttaatccttgatgggacagttgccagcca
aatgatgcccatggaaaagacagcaagcaggtgggtttctaagaatagaa
tgcaggtccctgtgagttaacagggtcctgctgagatgagaggacatctc
accctccactcaccttcacttttataatgacaacaaagaaagatggctga
gctcatctgcgtttacaggcaggacacaatgccatgaaattctgagagca
tcccatggattttactcccactggttgggtggtcacgggaagcaagtgta
gtagaaagactcaggactgtctgccaagagacagctggctgaggaggaaa
gcctggagctggccatggttctgtggggaggaggtcctgagagggacatt
ttgttctttggaattctacagacttgaaagaatgatgcacctggcttcgg
agaatgggaaggttggctgaggaccttgtgcaagaacaatggaggataat
gcccaggacctgttaccaccatccttcaactgttgtgaaggtcctgcctg
tctggttgtcatggaggagacattcctcaagagagctagtgaagcccatc
aaggatgcaatggatgggtggctcagtgacctggtagacataaccatagt
ggttgctgttcattaaactcatcctgctgatttgcaaggctgcctggaag
aatggcatgggggtccgggggagggttggcagactgaagctataaagata
aaagcaaggcccatgcgaatagacacttgaacagctagaattgttgttta
ccagcaaacaccggactgcatggagctctgctccactgaggtgaagatct
ggacaggctctttgtgaccctttcacttaacacaaacttcccatgcttag
ttggcagctgataaaaggaactgtcaatgatgtgattaagagcttaccat
catcggaacatagatgggatagggagaaacgggtgaggggtggg
gaattcagtctaagcaatgaaaatagtaagtataattaaatggcaccaat
ccccagtgtgcggtagtagatcctggtacccaaatgatggttcctcacac
agggagtcttcaaaacagagaagatgggatagagaagaaggaaaagggga
gggaagcaaggagggaggaaaggaaggaaagagaaggggaagagaaagga
atgtctatctattaatgtaaatgtcgattggcacatctgattgtttttaa
tgttccacgtacattggtaaacgagatcacgaaagtaatcttttgtgtat
taatggtttatccacggttggtccttcatacccagggcttccacatctgt
gaattcaacaaaccatgggctgaaatggagttaggtctgcattggtggcc
tctgtagggaacacgctttttctgcaggggacgtgtagggagtggagttt
tttttcaggatctcctacacaggactacataacaaatagttacatagtat
ttatgttgtattaggtattatatgcctaggatatgtacaaatattacata
ttgtttggaaagggatttgagcatctgtagattttttttatcttaagggg
attctgaaagcaaaaaccccaaggacattgtttcatatgcattcacaaat
gattaagcactttataaatatacagtatagtcatgtgtatcatgttcata
tgtctctataaataacactaggaaaataatagaaaatatagaagacaact
agttaaaatacagtaagaagccagagctagaagccaggcttttaagtatc
tagtatttttaattgttgatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70877046_70878083
seq2: B6Ng01-286F03.b_45_1088 (reverse)

seq1  CCCACCC--CACCCGTTTCTCCCTATCCCATCTATG-TCCGATGATGGT-  46
      |||||||  ||||||||||||||||||||||||||| |||||||||||| 
seq2  CCCACCCCTCACCCGTTTCTCCCTATCCCATCTATGTTCCGATGATGGTA  50

seq1  AGCTCTTAATCACATCATGGACAGTTCC-TTTATCAGCTGCCAACTAAGC  95
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  AGCTCTTAATCACATCATTGACAGTTCCTTTTATCAGCTGCCAACTAAGC  100

seq1  ATGGGAAGTTTGTG-TAAGTGAAAGGGTCACAAAGAGCCTGTCCAGATCT  144
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGTTTGTGTTAAGTGAAAGGGTCACAAAGAGCCTGTCCAGATCT  150

seq1  TCACCTCAGTGGAGCAGAGCTCCATGCAGTCCGGTGTTTGCTGGTAAACA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCAGTGGAGCAGAGCTCCATGCAGTCCGGTGTTTGCTGGTAAACA  200

seq1  ACAATTCTAGCTGTTCAAGTGTCTATTCGCATGGGCCTTGCTTTTATCTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTAGCTGTTCAAGTGTCTATTCGCATGGGCCTTGCTTTTATCTT  250

seq1  TATAGCTTCAGTCTGCCAACCCTCCCCCGGACCCCCATGCCATTCTTCCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTCAGTCTGCCAACCCTCCCCCGGACCCCCATGCCATTCTTCCA  300

seq1  GGCAGCCTTGCAAATCAGCAGGATGAGTTTAATGAACAGCAACCACTATG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCTTGCAAATCAGCAGGATGAGTTTAATGAACAGCAACCACTATG  350

seq1  GTTATGTCTACCAGGTCACTGAGCCACCCATCCATTGCATCCTTGATGGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTCTACCAGGTCACTGAGCCACCCATCCATTGCATCCTTGATGGG  400

seq1  CTTCACTAGCTCTCTTGAGGAATGTCTCCTCCATGACAACCAGACAGGCA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTAGCTCTCTTGAGGAATGTCTCCTCCATGACAACCAGACAGGCA  450

seq1  GGACCTTCACAACAGTTGAAGGATGGTGGTAACAGGTCCTGGGCATTATC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTCACAACAGTTGAAGGATGGTGGTAACAGGTCCTGGGCATTATC  500

seq1  CTCCATTGTTCTTGCACAAGGTCCTCAGCCAACCTTCCCATTCTCCGAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGTTCTTGCACAAGGTCCTCAGCCAACCTTCCCATTCTCCGAAG  550

seq1  CCAGGTGCATCATTCTTTCAAGTCTGTAGAATTCCAAAGAACAAAATGTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGCATCATTCTTTCAAGTCTGTAGAATTCCAAAGAACAAAATGTC  600

seq1  CCTCTCAGGACCTCCTCCCCACAGAACCATGGCCAGCTCCAGGCTTTCCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGGACCTCCTCCCCACAGAACCATGGCCAGCTCCAGGCTTTCCT  650

seq1  CCTCAGCCAGCTGTCTCTTGGCAGACAGTCCTGAGTCTTTCTACTACACT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCAGCTGTCTCTTGGCAGACAGTCCTGAGTCTTTCTACTACACT  700

seq1  TGCTTCCCGTGACCACCCAACCAGTGGGAGTAAAATCCATGGGATGCTCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCGTGACCACCCAACCAGTGGGAGTAAAATCCATGGGATGCTCT  750

seq1  CAGAATTTCATGGCATTGTGTCCTGCCTGTAAACGCAGATGAGCTCAGCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTCATGGCATTGTGTCCTGCCTGTAAACGCAGATGAGCTCAGCC  800

seq1  ATCTTTCTTTGTTGTCATTATAAAAGTGAAGGTGAGTGGAGGGTGAGATG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTTGTTGTCATTATAAAAGTGAAGGTGAGTGGAGGGTGAGATG  850

seq1  TCCTCTCATCTCAGCAGGACCCTGTTAACTCACAGGGACCTGCATTCTAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCATCTCAGCAGGACCCTGTTAACTCACAGGGACCTGCATTCTAT  900

seq1  TCTTAGAAACCCACCTGCTTGCTGTCTTTTCCATGGGCATCATTTGGCTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAACCCACCTGCTTGCTGTCTTTTCCATGGGCATCATTTGGCTG  950

seq1  GCAACTGTCCCATCAAGGATTAAGTATAGAGAGAAGTATTCCCCCTTTAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGTCCCATCAAGGATTAAGTATAGAGAGAAGTATTCCCCCTTTAA  1000

seq1  AATTCCTTTAAGGGTTCCAGTGTCTTGCAACACTTGAAGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTTAAGGGTTCCAGTGTCTTGCAACACTTGAAGAATTC  1044

seq1: chr17_70704130_70704941
seq2: B6Ng01-286F03.g_68_890

seq1  GAATTCAGTCTAAGCAATGAAAATAGTAAGTATAATTAAATGGCACCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTAAGCAATGAAAATAGTAAGTATAATTAAATGGCACCAAT  50

seq1  CCCCAGTGTGCGGTAGTAGATCCTGGTACCCAAATGATGGTTCCTCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTGTGCGGTAGTAGATCCTGGTACCCAAATGATGGTTCCTCACAC  100

seq1  AGGGAGTCTTCAAAACAGAGAAGATGGGATAGAGAAGAAGGAAAAGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTCTTCAAAACAGAGAAGATGGGATAGAGAAGAAGGAAAAGGGGA  150

seq1  GGGAAGCAAGGAGGGAGGAAAGGAAGGAAAGAGAAGGGGAAGAGAAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAAGGAGGGAGGAAAGGAAGGAAAGAGAAGGGGAAGAGAAAGGA  200

seq1  ATGTCTATCTATTAATGTAAATGTCGATTGGCACATCTGATTGTTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTATCTATTAATGTAAATGTCGATTGGCACATCTGATTGTTTTTAA  250

seq1  TGTTCCACGTACATTGGTAAACGAGATCACGAAAGTAATCTTTTGTGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCACGTACATTGGTAAACGAGATCACGAAAGTAATCTTTTGTGTAT  300

seq1  TAATGGTTTATCCACGGTTGGTCCTTCATACCCAGGGCTTCCACATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTTTATCCACGGTTGGTCCTTCATACCCAGGGCTTCCACATCTGT  350

seq1  GAATTCAACAAACCATGGGCTGAAATGGAGTTAGGTCTGCATTGGTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAAACCATGGGCTGAAATGGAGTTAGGTCTGCATTGGTGGCC  400

seq1  TCTGTAGGGAACACGCTTTTTCTGCAGGGGACGTGTAGGGAGTGGAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGGGAACACGCTTTTTCTGCAGGGGACGTGTAGGGAGTGGAGTTT  450

seq1  TTTTTCAGGATCTCCTACACAGGACTACATAACAAATAGTTACATAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGGATCTCCTACACAGGACTACATAACAAATAGTTACATAGTAT  500

seq1  TTATGTTGTATTAGGTATTATATGCCTAGGATATGTACAAATATTACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTGTATTAGGTATTATATGCCTAGGATATGTACAAATATTACATA  550

seq1  TTGTTTGGAAAGGGATTTGAGCATCTGTAGA-TTTTTTTATCTTAAGGGG  599
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGTTTGGAAAGGGATTTGAGCATCTGTAGATTTTTTTTATCTTAAGGGG  600

seq1  ATTCTGAAAGC-AAAACCCCAAGGACATTG-TTCATATGCATTCACAAAT  647
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  ATTCTGAAAGCAAAAACCCCAAGGACATTGTTTCATATGCATTCACAAAT  650

seq1  GATTAAGCAC-TTATAAATATACAGTATAGTCATGTGTATCATGTTCATA  696
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGCACTTTATAAATATACAGTATAGTCATGTGTATCATGTTCATA  700

seq1  TGTCTCTATAAATAACACTAGG-AAATAATAGAAAAATAAAGAAGA-AAC  744
      |||||||||||||||||||||| ||||||||| |||||| |||||| |||
seq2  TGTCTCTATAAATAACACTAGGAAAATAATAG-AAAATATAGAAGACAAC  749

seq1  TAGTT-AAATACAGTAAGAAGCCAGAGCTAGAAGCCAGGCTTTT-AGTAT  792
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGTTAAAATACAGTAAGAAGCCAGAGCTAGAAGCCAGGCTTTTAAGTAT  799

seq1  -TTGTA-TTTTAAT--GTGATTTT  812
       | ||| |||||||   |||||||
seq2  CTAGTATTTTTAATTGTTGATTTT  823