BAC Information

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BAC

Clone NameB6Ng01-292B21
Chromosome17 (Build37)
Map Location 64,202,276 - 64,347,613
singlet/doubletdoublet
Overlap geneLOC668677, A930002H24Rik, Fert2
Upstream geneEfna5, Fbxl17, Ppia-ps17_1026.1, LOC638867
Downstream geneLOC669778, Pja2, LOC100043582, Man2a1, 4930583I09Rik, LOC100043871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292B21.bB6Ng01-292B21.g
ACCGA088836GA088837
length1,129140
definitionB6Ng01-292B21.b B6Ng01-292B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,346,483 - 64,347,613)(64,202,276 - 64,202,420)
sequence
gaattctttacagtgttctactaaacagtgccattgaatatagttatagg
aaaagtttccacgtgataatgcttaataaaaaattaaaactatgtgtaag
ctgctctaagtcaccctccaaacacaacataacataattcctctcagaac
atggcctttaagctttccacacgtagatatttcaacttatgaaagtaaaa
tactaaaattctgttttatagattattttcccacttttttatggtccttc
cgtcatctatgtacgtgcacacaatgaccatgaacttgtacacacgagtg
acagacaggagtcaatgttatctgtgtcctcagcctctcttctctgtctt
ttcattccatctgtattgccttctaaagtgggccaggcactgtatctcca
ctcacaagcctcgctaaccgtaagacctacaaatgcttaggaacaggcca
tgtggggcattcctcccatcacattatctcagctcacattacacccagga
ctagggcaaggagaattaactacacagggtggaaagtttcaagactctag
aggatgagcctgaaaccattttaacaacgttttcctcttaaacatgaagc
catctcagagcacttcagtgacaaatgagttggcctcctaaagagtccag
tttgacagttcgaacaactaggttaagaactggtcacattcttacagctg
ctctagacctgtaagacaagccaggtgaatatgttaggagaactactcgc
ttcgctttgctgcctgccttatcacaaatataaatgactcttattttccc
cttggttatcatatttttatgcctacatatttttagctgttaataaaaat
aagcaaacatactattgagagaaatgaagataattattgaacatgcagcc
aagggttcttactctataactctcttttttgggggtaaatctctcactga
ctctgagctcattagtcacactagaatgtctgcctgaacatcctcgcacc
cgaactgggatacaggtgccaggctcactttgcatggatgctagagatcc
aaagtcacaattctgtgctttgttgtgcaagaacttaatcaaatgatgat
ccaccttccagccaattctgttcttaata
tctctgtctctttaaaaatatatctgtaaatagggctaatagaagtgtct
atcccacgggggggggggggttatagtaaaagagaagtgctgcatgtatg
tgcacacatactttcatgcatgctaaccagatttctccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_64346483_64347613
seq2: B6Ng01-292B21.b_48_1176 (reverse)

seq1  TATTAAGAACAGAATTGGGCTGGGAAGGTGGATCATCATTTGATT-AGTT  49
      |||||||||||||||| |||| ||||||||||||||||||||||| ||||
seq2  TATTAAGAACAGAATT-GGCT-GGAAGGTGGATCATCATTTGATTAAGTT  48

seq1  CTTGGCAC-ACAAAGCACAGAATTGTGACTTTGGATCTCTAGCATCCATG  98
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTT-GCACAACAAAGCACAGAATTGTGACTTTGGATCTCTAGCATCCATG  97

seq1  CAAAGTGAGCCTGGCACCTGTATCCCAGTTCGGGTGGCGAGGATGTTCAG  148
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAAAGTGAGCCTGGCACCTGTATCCCAGTTCGGGT-GCGAGGATGTTCAG  146

seq1  GCAGACATTCTAGTGTGACTAATGAGCTCAGAGTCAGTGAGAGATTTACC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACATTCTAGTGTGACTAATGAGCTCAGAGTCAGTGAGAGATTTACC  196

seq1  CCCAAAAAAGAGAGTTATAGAGTAAGAACCCTTGGCTGCATGTTCAATAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAAAGAGAGTTATAGAGTAAGAACCCTTGGCTGCATGTTCAATAA  246

seq1  TTATCTTCATTTCTCTCAATAGTATGTTTGCTTATTTTTATTAACAGCTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTCATTTCTCTCAATAGTATGTTTGCTTATTTTTATTAACAGCTA  296

seq1  AAAATATGTAGGCATAAAAATATGATAACCAAGGGGAAAATAAGAGTCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTAGGCATAAAAATATGATAACCAAGGGGAAAATAAGAGTCAT  346

seq1  TTATATTTGTGATAAGGCAGGCAGCAAAGCGAAGCGAGTAGTTCTCCTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTGTGATAAGGCAGGCAGCAAAGCGAAGCGAGTAGTTCTCCTAA  396

seq1  CATATTCACCTGGCTTGTCTTACAGGTCTAGAGCAGCTGTAAGAATGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCACCTGGCTTGTCTTACAGGTCTAGAGCAGCTGTAAGAATGTGA  446

seq1  CCAGTTCTTAACCTAGTTGTTCGAACTGTCAAACTGGACTCTTTAGGAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTTAACCTAGTTGTTCGAACTGTCAAACTGGACTCTTTAGGAGG  496

seq1  CCAACTCATTTGTCACTGAAGTGCTCTGAGATGGCTTCATGTTTAAGAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCATTTGTCACTGAAGTGCTCTGAGATGGCTTCATGTTTAAGAGG  546

seq1  AAAACGTTGTTAAAATGGTTTCAGGCTCATCCTCTAGAGTCTTGAAACTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGTTGTTAAAATGGTTTCAGGCTCATCCTCTAGAGTCTTGAAACTT  596

seq1  TCCACCCTGTGTAGTTAATTCTCCTTGCCCTAGTCCTGGGTGTAATGTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCTGTGTAGTTAATTCTCCTTGCCCTAGTCCTGGGTGTAATGTGA  646

seq1  GCTGAGATAATGTGATGGGAGGAATGCCCCACATGGCCTGTTCCTAAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATAATGTGATGGGAGGAATGCCCCACATGGCCTGTTCCTAAGCA  696

seq1  TTTGTAGGTCTTACGGTTAGCGAGGCTTGTGAGTGGAGATACAGTGCCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGGTCTTACGGTTAGCGAGGCTTGTGAGTGGAGATACAGTGCCTG  746

seq1  GCCCACTTTAGAAGGCAATACAGATGGAATGAAAAGACAGAGAAGAGAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTTTAGAAGGCAATACAGATGGAATGAAAAGACAGAGAAGAGAGG  796

seq1  CTGAGGACACAGATAACATTGACTCCTGTCTGTCACTCGTGTGTACAAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACACAGATAACATTGACTCCTGTCTGTCACTCGTGTGTACAAGT  846

seq1  TCATGGTCATTGTGTGCACGTACATAGATGACGGAAGGACCATAAAAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCATTGTGTGCACGTACATAGATGACGGAAGGACCATAAAAAAG  896

seq1  TGGGAAAATAATCTATAAAACAGAATTTTAGTATTTTACTTTCATAAGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAATAATCTATAAAACAGAATTTTAGTATTTTACTTTCATAAGTT  946

seq1  GAAATATCTACGTGTGGAAAGCTTAAAGGCCATGTTCTGAGAGGAATTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATCTACGTGTGGAAAGCTTAAAGGCCATGTTCTGAGAGGAATTAT  996

seq1  GTTATGTTGTGTTTGGAGGGTGACTTAGAGCAGCTTACACATAGTTTTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTGTGTTTGGAGGGTGACTTAGAGCAGCTTACACATAGTTTTAA  1046

seq1  TTTTTTATTAAGCATTATCACGTGGAAACTTTTCCTATAACTATATTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTAAGCATTATCACGTGGAAACTTTTCCTATAACTATATTCAA  1096

seq1  TGGCACTGTTTAGTAGAACACTGTAAAGAATTC  1131
      |||||||||||||||||||||||||||||||||
seq2  TGGCACTGTTTAGTAGAACACTGTAAAGAATTC  1129

seq1: chr17_64202276_64202420
seq2: B6Ng01-292B21.g_70_209

seq1  TCTCTGTCTCTTTAAAAATATATCTGTAAATAGGGCTAATAGAAGTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTTTAAAAATATATCTGTAAATAGGGCTAATAGAAGTGTCT  50

seq1  ATCCCACGGGGGGGGGGGGGTTATAAGGCTTAAATGAGACTGTGCTGCAT  100
      |||||||||||||||||||||||||     |||| ||||  |||||||||
seq2  ATCCCACGGGGGGGGGGGGGTTATA----GTAAAAGAGA-AGTGCTGCAT  95

seq1  GTATGTGCACACATACATTCATGCATGCTAACCAGTTTTCTCCAG  145
      |||||||||||||||| |||||||||||||||||| |||||||||
seq2  GTATGTGCACACATACTTTCATGCATGCTAACCAGATTTCTCCAG  140