BAC Information

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BAC

Clone NameB6Ng01-296C17
Chromosome17 (Build37)
Map Location 38,555,569 - 38,556,717
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136
Downstream geneLOC626985, LOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296C17.bB6Ng01-296C17.g
ACCGA091845GA091846
length1,1551,194
definitionB6Ng01-296C17.b B6Ng01-296C17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactcttattctttgcaaatgatattcaatctcaaacccctaaa
tatctaattttgagatctggttagtagaatgtatttgtagtgtacataca
ttaacatgtagctagttgtcatctgccactggtgtatattatattagcca
gtgggaaacagtgtaaacttaatcagatatcatcatagttctgattagag
attcaagactaccccaaaattctgtaacatattagaatctttagatttaa
gtactatgaagaaacgtgatgaatcacaaaatttttaggtagctcagaga
tgattacccattttaacttaccctgccttcagtgagcattgatggtagtg
gcaaagttaaaataaaaaacatcatcaagaaggaagtcttcactgaaacc
aatcaaagagaatatcttagtttcagtaagcagtgttggagacacaaagt
ttaaccacagtattaatagaagttatgtccacacaaataattatgtgtga
caatatctttaacagtaccactagaaaggaaagagatattatgggggtct
atgtagcttcattgttcctgacttgcctcttatacaaatgttacttaagc
taatacatttttttaaactcttatttgtgtatttgccaacagaggagaat
tcctagtttatgtaaacacactctgctcattatacatagtattcactctc
agtcattgccaaatcctatatctcttagaagttattaaggccactaagtg
taaaaccattagcctttgtgttggaattcatagaaatagcttaccttgta
atttgcatagatggtatctcattttgtatggtgtgtgtacattttgctcc
ttcaaactcctttttaatttgtatgtgaattgcgtcagattgttttctgg
ctgaaagtcaatgcagtcatttccagcaaacaacaagttcagtttaaatt
tgttattccatttactgatttttctctcttcaaacccttcagtatgcttc
ataatgctctctttacaacaatactctgttttttacattggctttactgc
taaatttggaatcagaacctccaccatacacaatatgttaatgttccttt
tacttgctttacctttattcatacaaattggaaaaaaaaaaaccttgtct
gggtt
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctggtcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtggttaaggcagggagga
ttctagatgaaattcaggacaatctatcagaagtaaagcggggagagaga
gtaggagcaaagagaaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
ggagccagctcttggtagctctgaatcagatgatgaattctcctctgaag
aaacagactgggaggaagaagcagctcattatgagaaaaaagggtaccag
ccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcga
aggccagtttgctgattggcctcagggcagtcggcttcaaggtccgccct
atgcggagtccccgccctgcgtagtgcgtcagccctgcgcagagagacaa
tgcacagagaggcaatgcgcagactcattcattcccagagaggaacaaag
gaaaatacaacaggcatttccagtctttgaaaggagccgagggtgggcgt
gtccacgctccggtagaatacttacaaattaaagaactcgccgagtcggt
ccgtaaatatgggaaccaatgctaattttaccttggtgcagttagacagg
cttgccggcatggcactaactcctgccgactggcaaacggttgtaaaagc
cgctctccctagtatgggcaaatatatggaatggagagctctttggcatg
aaactgcacaagcgcaggccgagcaaacgcagctgctttgactccagagc
agaagagaatggacttttgacttgttacggttcagggagcctttaattct
tgctgattcgacaacttacccatttgggggagctaatgccaagtttccct
ccacggcataataaggccctgggaaaggggcttcttttccgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38555569_38556717
seq2: B6Ng01-296C17.b_49_1203

seq1  GAATTCAACTCTTATTCTTTGCAAATGATATTCAATCTCAAACCCCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCTTATTCTTTGCAAATGATATTCAATCTCAAACCCCTAAA  50

seq1  TATCTAATTTTGAGATCTGGTTAGTAGAATGTATTTGTAGTGTACATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATTTTGAGATCTGGTTAGTAGAATGTATTTGTAGTGTACATACA  100

seq1  TTAACATGTAGCTAGTTGTCATCTGCCACTGGTGTATATTATATTAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGTAGCTAGTTGTCATCTGCCACTGGTGTATATTATATTAGCCA  150

seq1  GTGGGAAACAGTGTAAACTTAATCAGATATCATCATAGTTCTGATTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAACAGTGTAAACTTAATCAGATATCATCATAGTTCTGATTAGAG  200

seq1  ATTCAAGACTACCCCAAAATTCTGTAACATATTAGAATCTTTAGATTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGACTACCCCAAAATTCTGTAACATATTAGAATCTTTAGATTTAA  250

seq1  GTACTATGAAGAAACGTGATGAATCACAAAATTTTTAGGTAGCTCAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATGAAGAAACGTGATGAATCACAAAATTTTTAGGTAGCTCAGAGA  300

seq1  TGATTACCCATTTTAACTTACCCTGCCTTCAGTGAGCATTGATGGTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACCCATTTTAACTTACCCTGCCTTCAGTGAGCATTGATGGTAGTG  350

seq1  GCAAAGTTAAAATAAAAAACATCATCAAGAAGGAAGTCTTCACTGAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTTAAAATAAAAAACATCATCAAGAAGGAAGTCTTCACTGAAACC  400

seq1  AATCAAAGAGAATATCTTAGTTTCAGTAAGCAGTGTTGGAGACACAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGAGAATATCTTAGTTTCAGTAAGCAGTGTTGGAGACACAAAGT  450

seq1  TTAACCACAGTATTAATAGAAGTTATGTCCACACAAATAATTATGTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCACAGTATTAATAGAAGTTATGTCCACACAAATAATTATGTGTGA  500

seq1  CAATATCTTTAACAGTACCACTAGAAAGGAAAGAGATATTATGGGGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCTTTAACAGTACCACTAGAAAGGAAAGAGATATTATGGGGGTCT  550

seq1  ATGTAGCTTCATTGTTCCTGACTTGCCTCTTATACAAATGTTACTTAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTTCATTGTTCCTGACTTGCCTCTTATACAAATGTTACTTAAGC  600

seq1  TAATACATTTTTTTAAACTCTTATTTGTGTATTTGCCAACAGAGGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATTTTTTTAAACTCTTATTTGTGTATTTGCCAACAGAGGAGAAT  650

seq1  TCCTAGTTTATGTAAACACACTCTGCTCATTATACATAGTATTCACTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTTTATGTAAACACACTCTGCTCATTATACATAGTATTCACTCTC  700

seq1  AGTCATTGCCAAATCCTATATCTCTTAGAAGTTATTAAGGCCACTAAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTGCCAAATCCTATATCTCTTAGAAGTTATTAAGGCCACTAAGTG  750

seq1  TAAAACCATTAGCCTTTGTGTTGGAATTCATAGAAATAGCTTACCTTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATTAGCCTTTGTGTTGGAATTCATAGAAATAGCTTACCTTGTA  800

seq1  ATTTGCATAGATGGTATCTCATTTTGTATGGTGTGTGTACATTTTGCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATAGATGGTATCTCATTTTGTATGGTGTGTGTACATTTTGCTCC  850

seq1  TTCAAACTCCTTTTTAATTTGTATGTGAATTGCGTCAGATTGTTTTCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTCCTTTTTAATTTGTATGTGAATTGCGTCAGATTGTTTTCTGG  900

seq1  CTGAAAGTCAATGCAGTCATTTCCAGCAAACAACAAGTTCAGTTTAAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGTCAATGCAGTCATTTCCAGCAAACAACAAGTTCAGTTTAAATT  950

seq1  TGTTATTCCATTTACTGATTTTTCTCTCTTCAAACCCTTCAGTATGCTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTCCATTTACTGATTTTTCTCTCTTCAAACCCTTCAGTATGCTTC  1000

seq1  ATAATGCTCTCTTTACAACAATACTCTG-TTTTTACATTGGCTTTTACTG  1049
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  ATAATGCTCTCTTTACAACAATACTCTGTTTTTTACATTGGC-TTTACTG  1049

seq1  CTAAAATTTGAATCAGAACCT-CACCATACAC-ATATG-TAATGT--CTT  1094
      ||||| || |||||||||||| |||||||||| ||||| ||||||  |||
seq2  CTAAATTTGGAATCAGAACCTCCACCATACACAATATGTTAATGTTCCTT  1099

seq1  TTACTTGCTTTTACTTAATTCATACAAATTGAAAAAAAAAAAAAC-TGTC  1143
      |||||||||||  ||| |||||||||||||| ||||||||||| | ||||
seq2  TTACTTGCTTTACCTTTATTCATACAAATTGGAAAAAAAAAAACCTTGTC  1149

seq1  TGGGTT  1149
      ||||||
seq2  TGGGTT  1155