BAC Information

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BAC

Clone NameB6Ng01-297B07
Chromosome17 (Build37)
Map Location 74,394,760 - 74,395,858
singlet/doubletsinglet
Overlap geneSrd5a2
Upstream geneLycat, LOC668709, Capn13, LOC100043666, Galnt14, Ehd3, LOC240160, Xdh
Downstream geneMemo1, EG668716, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4, Birc6, Ttc27, LOC100043672
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297B07.bB6Ng01-297B07.g
ACCGA092531GA092532
length1,093458
definitionB6Ng01-297B07.b B6Ng01-297B07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctccctcgggtcgggtcggaagatcagatcaatttaggtaagaa
attagatttaaaaggaaaagaaaaaagcctacggggacccaaggcagaat
tttctctccattaacacatcatttctaggaaaggaggagccaaaagtaca
aatttcaatctgcctcttttagcccccatccagaggatctttattggtca
atatttagtaatcatgcagtgttaatatggaattctcattcgttaagaaa
gttaagtattgacaagtagtaatacatttatgtattagttatccaataaa
tatttgcaaaaagcctcttgtgtacaaagacccagggtagttatcatttt
atttgatacagatgtacagagagaaggatccaggttgcaggagataaaaa
ggcaagcatttgattttgcttgtttggaaatagatattggacaagaaaat
gtggttttatggacatctattcttttttttttaaagatttattttattta
tatgagtacactgtagctgtcttcagacacacaccagaagaatgcatcag
atctcattacagatggttgtgagccaccatgtaggtgctgggaattgaac
tcaagacctctggaagagtagtcagtgctcttaaccactgagccatctct
ccagcccctggacatctattcttatctccaaatatactactgtcagcttt
acagacacttttgtttttaggcaaggtttcactttgtagcccttactagc
ctaggcttgataaataagaacctcctgtctttacctctatagtgctggtt
ttaaaggcatacgccaccacagcctggctataaagtcttttttttttttt
ttttttaaagtgaggccatttcatatagaaaaactatgcatgctttctga
aaaccctatgaacacaatttttagattaaaaaaaggctttttgtgcaaca
aaaaatatgaccagtgccctttaaaataaacgaggagtaaattgtctgta
aaacaaatattgtacacgttgtccctcatcttcagagactttaaatgtct
agtaagagtttggggcatgatctgagacagctttgctctgact
gaattcacctgtgtctttcctatttttgttttctatttgcaagatatggc
catttctgatagaatagtgataaaatattaaacattaaaaccctccattt
tgagtcccaccatgtgtgctctttggttggtggtttagtccttaggagtt
gtgggggtactggctagctcatattgttgttcctcctgtgggactgcaaa
cccccccagctccttgggtcctttttccagctccttcactggggacccta
tggtcagtccaatggttggctgcgagcatccacctctgtatttgtgaggc
actggcagagcctctcaggagacagctttatcaggcttctgtcagcaggc
tcttgtcaacagtgtctgggtgtggtgattgtaaatggatgtatccccag
gtggggcagtctctagatggtcatttcttcagtctctgctctacactttg
tctctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_74394760_74395858
seq2: B6Ng01-297B07.b_48_1140 (reverse)

seq1  AGTCAGGAAGCAAAGCTGTCTCAGAATCATGCCCCCAAACTCTTTACTAA  50
      ||||||  |||||||||||||||| |||||| |||||||||| ||||| |
seq2  AGTCAG--AGCAAAGCTGTCTCAG-ATCATG-CCCCAAACTC-TTACT-A  44

seq1  GACATTTAAAAGTTCCTCTGAAGATGAGGGACAACGTGTAC-ATATTTGT  99
      ||||||| |||||  |||||||||||||||||||||||||| ||||||||
seq2  GACATTT-AAAGT--CTCTGAAGATGAGGGACAACGTGTACAATATTTGT  91

seq1  TTTACAGACAATTACTTCCTCGTTTATTTTAAAGGGCACTGGTCATA-TT  148
      |||||||||||||   ||||||||||||||||||||||||||||||| ||
seq2  TTTACAGACAATTTACTCCTCGTTTATTTTAAAGGGCACTGGTCATATTT  141

seq1  TTTGTTGCACAAAAAGCCTTTTTTTAATCTAAAAATTGTGTTCATAGGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGCACAAAAAGCCTTTTTTTAATCTAAAAATTGTGTTCATAGGGT  191

seq1  TTTCAGAAAGCATGCATAGTTTTTCTATATGAAATGGCCTCACTTT-AAA  247
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTCAGAAAGCATGCATAGTTTTTCTATATGAAATGGCCTCACTTTAAAA  241

seq1  AAAAAAAAAAAAAAAGACTTTATAGCCAGGCTGTGGTGGCGTATGCCTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGACTTTATAGCCAGGCTGTGGTGGCGTATGCCTTT  291

seq1  AAAACCAGCACTATAGAGGTAAAGACAGGAGGTTCTTATTTATCAAGCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGCACTATAGAGGTAAAGACAGGAGGTTCTTATTTATCAAGCCT  341

seq1  AGGCTAGTAAGGGCTACAAAGTGAAACCTTGCCTAAAAACAAAAGTGTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGTAAGGGCTACAAAGTGAAACCTTGCCTAAAAACAAAAGTGTCT  391

seq1  GTAAAGCTGACAGTAGTATATTTGGAGATAAGAATAGATGTCCAGGGGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCTGACAGTAGTATATTTGGAGATAAGAATAGATGTCCAGGGGCT  441

seq1  GGAGAGATGGCTCAGTGGTTAAGAGCACTGACTACTCTTCCAGAGGTCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGGCTCAGTGGTTAAGAGCACTGACTACTCTTCCAGAGGTCTT  491

seq1  GAGTTCAATTCCCAGCACCTACATGGTGGCTCACAACCATCTGTAATGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAATTCCCAGCACCTACATGGTGGCTCACAACCATCTGTAATGAG  541

seq1  ATCTGATGCATTCTTCTGGTGTGTGTCTGAAGACAGCTACAGTGTACTCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATGCATTCTTCTGGTGTGTGTCTGAAGACAGCTACAGTGTACTCA  591

seq1  TATAAATAAAATAAATCTTTAAAAAAAAAAGAATAGATGTCCATAAAACC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAAATAAATCTTTAAAAAAAAAAGAATAGATGTCCATAAAACC  641

seq1  ACATTTTCTTGTCCAATATCTATTTCCAAACAAGCAAAATCAAATGCTTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTTGTCCAATATCTATTTCCAAACAAGCAAAATCAAATGCTTG  691

seq1  CCTTTTTATCTCCTGCAACCTGGATCCTTCTCTCTGTACATCTGTATCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATCTCCTGCAACCTGGATCCTTCTCTCTGTACATCTGTATCAA  741

seq1  ATAAAATGATAACTACCCTGGGTCTTTGTACACAAGAGGCTTTTTGCAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGATAACTACCCTGGGTCTTTGTACACAAGAGGCTTTTTGCAAA  791

seq1  TATTTATTGGATAACTAATACATAAATGTATTACTACTTGTCAATACTTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTGGATAACTAATACATAAATGTATTACTACTTGTCAATACTTA  841

seq1  ACTTTCTTAACGAATGAGAATTCCATATTAACACTGCATGATTACTAAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTAACGAATGAGAATTCCATATTAACACTGCATGATTACTAAAT  891

seq1  ATTGACCAATAAAGATCCTCTGGATGGGGGCTAAAAGAGGCAGATTGAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACCAATAAAGATCCTCTGGATGGGGGCTAAAAGAGGCAGATTGAAA  941

seq1  TTTGTACTTTTGGCTCCTCCTTTCCTAGAAATGATGTGTTAATGGAGAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACTTTTGGCTCCTCCTTTCCTAGAAATGATGTGTTAATGGAGAGA  991

seq1  AAATTCTGCCTTGGGTCCCCGTAGGCTTTTTTCTTTTCCTTTTAAATCTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGCCTTGGGTCCCCGTAGGCTTTTTTCTTTTCCTTTTAAATCTA  1041

seq1  ATTTCTTACCTAAATTGATCTGATCTTCCGACCCGACCCGAGGGAGGAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTACCTAAATTGATCTGATCTTCCGACCCGACCCGAGGGAGGAAT  1091

seq1  TC  1099
      ||
seq2  TC  1093