BAC Information

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BAC

Clone NameB6Ng01-297D16
Chromosome17 (Build37)
Map Location 21,316,487 - 21,317,626
singlet/doubletsinglet
Overlap genenone
Upstream geneFpr-rs6, EG627743, EG224576, V2r6, EG637720, EG665525, EG627805, V1re5, EG627814, EG381065, EG224582, Fpr-rs3, EG433073, V1re2, V1re6, LOC100041976, V1re3, V1re1, V1re8, V1re7, V1re4, LOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666
Downstream geneEG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297D16.bB6Ng01-297D16.g
ACCGA092637GA092638
length1,0611,130
definitionB6Ng01-297D16.b B6Ng01-297D16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtgacagcagatgctggcaaagatctggagaaagaggaacac
tcttccattgctggtgtgattgcaaactggtacaagcattttggaaatct
gtctggcggttcctcaaaaattggacatagtactactggaggatccagca
atatctctcctgggcatatatccagaagatgttccaactggtaataagaa
cacattctccactatgttcatattagccttatttataatagccagaagct
gtaaagaacacagatgtccctcaacagaggaatggatacagaaaatgtgg
tagttttacacaatgttgtactattaaatcaatgaatatatgaaattcct
atgcaaatggatggatctggagggtatcatcctgagtgaggtaacccaat
cacaaaagaattcacatgatatgcactcactgataaatggattttagccc
agaaacttagaatacccaagatacaacttgcaaaacacatgaaacttaag
agaaggaagagcaaagtgtggacaattcgccccttattagaattgggaac
aaaacactcatggaaggagttacagggacaaagtttggagctgagaggaa
aggatggaccatgtagtcactgccccacccgtggggtctaaaccagaatc
agccaccaaacgcagacacgattacattatgcctgcaagattttcttgaa
gggaccctgatatagctgtctcttgtgagactaagccagtgcttggcaaa
cacagatgtggatgctcacagtcagctagtggatggaccacagggccccc
aatggaagagctggagaaaatacccaaggatgtgaagtggtctgcaaccc
tataggtggaacaatgatatgaactaatcagtacccccagagttcgtgtc
tctagctgcatttttagcacaagatggcctattcaaccatcattgggaag
agaggccccttggtcttggccaactttatatgccctagtacaggagaaaa
caccagggccaagaagtggggagtgggttttgttaggggagcaggggctg
ggggggttata
gaattcttatctggccagcatcctttggttccagtggggacccaaagaag
tcatataccaaggcatggaggatgccaggaacatctaggatgtttcacag
ctacataagagcccacggcccagcctggaaaaacccctaaagtatcaagg
attatcagcgattctaaggtagggtggaatatagagctgatgaatactgg
gatggttgaaggaaacagcacgaggttaaattcagggaagtgtgttgtga
gagctaagacagggcaaatcaaaaggatggcctatcagacccaggataga
tagcctatgccagaattagaactgtctgggtagagctggcttctgtggct
gtaggagcactgaaagcacataagcaggaggactcccagcacactcttat
atctctctgcaggttggggaggcagaggacaaccacataggtgaccagta
tgtctgcctagtcatccagacagctcatgactagctcgcacagcaacatc
tgaggctgcacactggtggagctgctggttttcaagaagttaactcctct
ccatggaatgaagttcctaagcttcctctccctgtactggccaggtgaag
acccactgctgcaggacattgtggtgtagcgaagatctgtacagccatcc
cgtctatgccagccagccctgaaggtggcttgctagcatttcagcaccac
cagcctttgtccatgtctgggcaaggcagttcttggccctcaacccatct
tcccaccatatcattctgttttgtctgtccactggtaggagatggggaac
cagctctgacactagtctgggcatggagaaggtccaattcttcctgtccc
tggctctcagctcctgggattctcaggagcaaaattatctgagagaaaca
agagtcaatgttagccctgaagcctcttggactctgtcttattttctaga
gatgtgtcatggtggctcttgggcattagagggagccctatgactgcaag
ccatcctatgttcaacagacccagagcacgctactacagatctcaatcac
aaatctctagttcctcttcaagtctactttaaaagtactgtaacacacag
aagtcctcatagcagcatgtctcagttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_21316487_21317626
seq2: B6Ng01-297D16.g_65_1194

seq1  GAATTCTTATCTGGCCAGCATCCTTTGGTTCCAGTGGGGACCCAAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCTGGCCAGCATCCTTTGGTTCCAGTGGGGACCCAAAGAAG  50

seq1  TCATATACCAAGGCATGGAGGATGCCAGGAACATCTAGGATGTTTCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATACCAAGGCATGGAGGATGCCAGGAACATCTAGGATGTTTCACAG  100

seq1  CTACATAAGAGCCCACGGCCCAGCCTGGAAAAACCCCTAAAGTATCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAAGAGCCCACGGCCCAGCCTGGAAAAACCCCTAAAGTATCAAGG  150

seq1  ATTATCAGCGATTCTAAGGTAGGGTGGAATATAGAGCTGATGAATACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAGCGATTCTAAGGTAGGGTGGAATATAGAGCTGATGAATACTGG  200

seq1  GATGGTTGAAGGAAACAGCACGAGGTTAAATTCAGGGAAGTGTGTTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGAAGGAAACAGCACGAGGTTAAATTCAGGGAAGTGTGTTGTGA  250

seq1  GAGCTAAGACAGGGCAAATCAAAAGGATGGCCTATCAGACCCAGGATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGACAGGGCAAATCAAAAGGATGGCCTATCAGACCCAGGATAGA  300

seq1  TAGCCTATGCCAGAATTAGAACTGTCTGGGTAGAGCTGGCTTCTGTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTATGCCAGAATTAGAACTGTCTGGGTAGAGCTGGCTTCTGTGGCT  350

seq1  GTAGGAGCACTGAAAGCACATAAGCAGGAGGACTCCCAGCACACTCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGCACTGAAAGCACATAAGCAGGAGGACTCCCAGCACACTCTTAT  400

seq1  ATCTCTCTGCAGGTTGGGGAGGCAGAGGACAACCACATAGGTGACCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTGCAGGTTGGGGAGGCAGAGGACAACCACATAGGTGACCAGTA  450

seq1  TGTCTGCCTAGTCATCCAGACAGCTCATGACTAGCTCGCACAGCAACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCCTAGTCATCCAGACAGCTCATGACTAGCTCGCACAGCAACATC  500

seq1  TGAGGCTGCACACTGGTGGAGCTGCTGGTTTTCAAGAAGTTAACTCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGCACACTGGTGGAGCTGCTGGTTTTCAAGAAGTTAACTCCTCT  550

seq1  CCATGGAATGAAGTTCCTAAGCTTCCTCTCCCTGTACTGGCCAGGTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAATGAAGTTCCTAAGCTTCCTCTCCCTGTACTGGCCAGGTGAAG  600

seq1  ACCCACTGCTGCAGGACATTGTGGTGTAGCGAAGATCTGTACAGCCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGCTGCAGGACATTGTGGTGTAGCGAAGATCTGTACAGCCATCC  650

seq1  CGTCTATGCCAGCCAGCCCTGAAGGTGGCTTGCTAGCATTTCAGCACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTATGCCAGCCAGCCCTGAAGGTGGCTTGCTAGCATTTCAGCACCAC  700

seq1  CAGCCTTTGTCCATGTCTGGGCAAGGCAGTTCTTGGCCCTCAACCCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTGTCCATGTCTGGGCAAGGCAGTTCTTGGCCCTCAACCCATCT  750

seq1  TCCCACCATATCATTCTGTTTTGTCTGTCCACTGGTAGGAGATGGGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCATATCATTCTGTTTTGTCTGTCCACTGGTAGGAGATGGGGAAC  800

seq1  CAGCTCTGACACTAGTCTGGGCATGGAGAAGGTCCAATTCTTCCTGTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGACACTAGTCTGGGCATGGAGAAGGTCCAATTCTTCCTGTCCC  850

seq1  TGGCTCTCAGCTCCTGGGATTCTCAGGAGCAAAATTATCTGAGAGAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTCAGCTCCTGGGATTCTCAGGAGCAAAATTATCTGAGAGAAACA  900

seq1  AGAGTCAATGTTAGCCCTGAAGCCTCTTGGACTCCTGTCTTATTTTCTAG  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGAGTCAATGTTAGCCCTGAAGCCTCTTGGACT-CTGTCTTATTTTCTAG  949

seq1  AGAATGTGTCATGGTGGCTCTTGGGCATTAGAGGGAGCCCTATGACTGCA  1000
      || |||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AG-ATGTGTCATGGTGGCTCTTGGGCATTAGAGGGAGCCCTATGACTGC-  997

seq1  AAGCCATCCTATGTTCCACAGACCCAGAGCACGCTACTACAGGATCTCCA  1050
      |||||||||||||||| |||||||||||||||||||||||| ||||||  
seq2  AAGCCATCCTATGTTCAACAGACCCAGAGCACGCTACTACA-GATCTC--  1044

seq1  AATCACAAATCTCTAGTTCCTCTTCCAAAGTCTACCTTAAAAGTACTGTA  1100
      |||||||||||||||||||||||||  |||||||| ||||||||||||||
seq2  AATCACAAATCTCTAGTTCCTCTTC--AAGTCTACTTTAAAAGTACTGTA  1092

seq1  AACAACACAGAGGTCTCCATAGCAGCATGGCTCAGTTCCA  1140
      |   ||||||| |||  |||||||||||| ||||||||||
seq2  A--CACACAGAAGTCCTCATAGCAGCATGTCTCAGTTCCA  1130